Daphnia magna (water flea): 116922976
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Entry
116922976 CDS
T07514
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08540
pregnane X receptor
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116922976
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dmk03310
]
116922976
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116922976
Nuclear receptors [BR:
dmk03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
116922976
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116922976
NCBI-ProteinID:
XP_045029449
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Position
LG5:8461959..8464711
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AA seq
402 aa
AA seq
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MNLTKSSAVSSRDDAGHATIPKTSKICGVCGDVARCYHFGGLCCASCKAFFRRAVVNDRY
KQYRCVYGGSCRIDVISRKHCSHCRLKQCLAIGMDKKWFMSDEMRAELKMKSMKKLRNNQ
EQLMILTQKICRQLAPADRSVDRTSGLVLSPDHAKEIHLLVHLCRRAYQVTEFPKHCQSS
DCQSALPGQTAVIFASVIRRVFFFLRSVPQLQQLDESSQMSLLKERGMESLIIMSALTFD
PIGRKWASKEGTSYNTLISESYPIHVCEKDFERLHGPAVMRKHFDTITSLLLSLNVDEQI
VVLLALVAFFAIDDNQQGNSAEAAHILVIQEHFIELLKRYVHWKMGPEISEKVFARYILK
LSDVREVHNLHKVAQLRLSSDEIHQLEHQLGGLALLKGGSQH
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgactaaatcgtccgcggtcagtagccgagatgatgctggtcatgcaacaatc
ccgaaaacgtcgaaaatctgcggcgtgtgcggtgatgtcgctcgctgctatcattttggt
ggcctgtgctgcgccagctgcaaagctttcttccggcgagccgtagtcaacgaccgctac
aagcaataccgatgcgtgtacggaggatcttgccggatagatgtcatatcgcgaaaacat
tgttcccactgccgtttaaagcaatgcctggccatcggcatggataagaaatggttcatg
tcggatgaaatgcgagctgaattaaagatgaaatcgatgaagaaactaagaaacaatcaa
gaacaattgatgattctaacgcagaaaatctgtcgccaactggcacctgctgaccgatct
gttgaccggacgtctggtctcgttctaagtcccgaccacgccaaggaaatccacctgttg
gtccatctctgcagacgagcgtaccaggtcactgagttcccgaaacattgccaaagttcc
gattgtcaatcagcactacctggccagacagcagtcattttcgctagcgtcatccgtcgt
gttttcttctttctgcgaagcgttccacaactccagcaattggacgagtctagtcaaatg
tccttgctgaaagagcgaggcatggagtcactaattatcatgtcggcgttgacgttcgac
ccgatcggtcgcaaatgggcgagcaaggagggaacgagttacaacactctgatcagcgag
tcttatccaatccacgtttgcgagaaagatttcgaacgactgcacgggccggcagtgatg
cgcaaacatttcgataccatcacatctttattgctgagtttgaacgtcgacgagcaaatc
gtcgtgctgctggcactggtggcgttcttcgccatcgacgataaccaacagggaaactct
gcagaagctgctcacatcctggtgatccaggagcattttatcgaattgctcaaacgttac
gtccactggaaaatgggtccagaaatcagcgagaaagtctttgcccgttacattctcaaa
ttgtcagacgtacgcgaagtccacaatctccacaaggttgcccagctacgtttgtccagc
gatgagatccatcagctagagcatcaattgggaggactagctctgttaaaaggcggttcc
cagcattag
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