KEGG   Daphnia magna (water flea): 116924777
Entry
116924777         CDS       T07514                                 
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
dmk  Daphnia magna (water flea)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I NB-ARC APAF1_C WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_IFT140_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st CARD APAF-1-like_WHD Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_WDR11_2nd Beta-prop_Vps41 AAA_16 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SCAP AAA_22 Beta-prop_IP5PC_F NPHP3_N nSTAND3 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 116924777
NCBI-ProteinID: XP_032787208
LinkDB
Position
LG6:complement(555979..563118)
AA seq 1419 aa
MNTVEKAALLRNRDAIVQNVEFNYIKEKLVAYGVLSVQEVQDVDCEKTKSAKVRRLLDLL
PEIGVKETFTTFVKILEEDYDWIAERLSECNNRDSPDAASHLNSDPFAAPDSLQHSLIQC
GIPFPPPHLISRHTKVSQIRECLKAMTQGQFVVIHGMAGAGKSVLAAESMRDTDLMVSTF
GNNVYWLTVGQTGTDTLLTKMQALCERLDHTVLPPLSVDQATERLRRLMTDPSRKNSLII
LDDVWRGEVVRAFDFGCRILMTTRDASVTDVVHGRVLLVKVQDGFTQEESMSYLANCFNI
SAQELPEQANDIYLESKGSPMVLSLLAPLLADRGEYQRIDAHRWDHYLGKLRDRRYTQLK
RHGSYNYETINEAIAISFDHLDQETRRSLNDFVIFLDDVNIPAPVLQVLWNCSRYEMEER
ISLLVANSLVAQHFQEQSSNCVVLYGIHDLLLDYLKSHLTAEEQRDAHRKLIDSYFAECN
HYFGALPDDNYILWFLGYHLYKAEYTELFPQIYLNLPFISAKLRATGPSDLLNDFRKYKD
YISEASGRNSQRVEDYTHFIRTCGHIVVQCHHLDINQLALQQPKNSCVYNDALEMAKMSK
DRFYLECRSVGSQTKESMDQVLRSTILNYGHVTAACFTQDGQRLLSAVDDGQIRMWDVDS
GKELHRFVGHNGSIHQLSLSRDAKRFVSSSADGSVKVWDLSAVISKLDGTPLDHPSSPPF
HPPCTIVMGSRTLVAGEIEHRPNKTPSPRMRQDSWHNMFDVGDRLVNDNSLKTYTGHTNE
VLGARFSENGALVVSCGLDNTARIWLSTACMELGVLDHPEPVTTCCFSDCGFFVATGCTD
SMIRLWNGNVSLYTCVAAFHTQNSSSRILFISFLSDTSILSVSDTEILRFDWTWSSDEEL
ESDSFGYVTNCLANANSNCCYNCATVTDDRQLLAVSTSKDNILLYNIDSTEQIFEYVGHT
GTVNTLHFSPSTNSDEPPKWLLSGSADKTLKVWNVADVERVECSLSCTAFHAVCPPDQSS
DFLIATVGSDNHIQVVSGSSCETLLTTNDVESSKDQVEMCVLSHRSSMMAWSTLSGLVKL
MSLDKKEVKTLGHHSDARVTLLKFSPSDVLLLTVSSEGCIKIWKPRNETVTITGPPKGVV
DCFFIESEEKTLMVCGADGSIRLWSIDTGLPISLILDNYGLNLTCVDRASNRQWLAQGTI
TEGVRIVHIPLDAEPCSSKPVKNSKGFRNPNRLGHQVVPVRVCRFANHVQLIAIGYDNGT
IEIFDYLRNTLQATLEAHQSWVRDLQWCQNSPFFQLVSLGDRIAWWDLSSARFGTSTSSV
LRNPTHSNGSNHLAGGMGFPLTPITPGSSFSSASSFSSSRFISTGTTQSSHLDGLVQTVE
FQTRGRYASKLFVSCDGRALVTVSDSGILYILHQLSQHD
NT seq 4260 nt   +upstreamnt  +downstreamnt
atgaacactgttgaaaaggctgcgttgcttagaaaccgagatgccattgttcaaaatgtt
gaatttaactacattaaagaaaaacttgtggcttatggagttctaagtgtccaagaggtg
caagatgtagattgtgagaaaaccaaatcagccaaagtgcgcagattgttggaccttctt
cctgaaattggtgtaaaagagacctttacgacttttgtcaaaattttagaagaagactat
gattggatagctgaaaggttaagtgagtgcaacaatcgggacagtccagatgcagcaagc
catttaaacagcgatccatttgcagctccagacagtttgcaacattcactgattcaatgt
ggcataccatttccaccaccacatctcatttctcgtcacacaaaagtctctcagatcaga
gaatgtcttaaagcaatgacgcaaggtcagtttgtggttatccatggtatggcaggagct
gggaaatcggttttggctgcggaatcaatgagagacacggacctcatggttagcaccttt
gggaataatgtctactggttgacagttggccaaacaggcacagatactttacttacaaaa
atgcaggcattgtgcgagagactggatcataccgttctacctccactgagcgttgaccaa
gccactgaacgtcttcgtcgccttatgacggatcctagtcggaaaaatagcctgataatc
ctagacgatgtttggagaggtgaagtggtccgtgcctttgatttcgggtgccggatattg
atgaccacccgagatgcttccgtgacggacgttgttcacggacgtgtgctgctggtaaaa
gttcaagacggcttcactcaggaggaatccatgtcttatttggccaattgctttaatatc
tcggcacaggaattgccggaacaggcaaacgatatttatttggaaagcaaaggttctcct
atggtgctttcgcttctagctccgctgttagccgatcgcggagaatatcagcgtatcgat
gcccatagatgggatcactacttgggaaaattacgcgacaggagatatactcaattgaag
cggcatggttcctacaactacgaaaccattaatgaagccattgccataagttttgatcat
cttgatcaagagaccagacgttcgttgaacgattttgttattttcttagacgatgtcaat
attccagctccggtgctgcaagttctttggaattgcagccgctatgaaatggaagaaaga
ataagtcttttagtggcaaattcactggtagcccaacacttccaggaacagtcatcaaat
tgcgttgttttgtacggcattcatgatcttctgttggactacctcaaatcacatcttacc
gctgaagaacagcgtgacgcccaccgcaagcttattgattcatatttcgccgagtgcaac
cattatttcggtgccttaccagacgataattatatcctctggtttttggggtaccatttg
tacaaagctgagtacacagagctttttcctcagatctacctcaacctacccttcatatct
gccaaattacgtgctaccggacccagtgatctacttaacgacttccgcaaatataaagac
tacatttcagaggctagtggaagaaatagtcaaagagtcgaagactatacacattttatt
cgaacctgtggacacattgtggttcaatgtcatcatttagatatcaatcaacttgctctt
cagcagccaaagaacagctgcgtctacaacgatgctctagaaatggcaaaaatgtccaag
gatagattctatttggagtgtcgctcagtcggcagtcaaacaaaagaaagcatggatcaa
gttctccgtagtaccattctaaattatggccacgtgaccgcagcctgcttcacgcaggat
gggcaacgcttgctcagcgcagtcgacgatggacagattcgcatgtgggacgttgattca
ggaaaggaactccaccgtttcgtgggacataacggcagcattcaccagctgtcactgagc
agggatgccaaacgtttcgtctcgtcgtcggctgacggatcggtgaaggtctgggatctc
tcggctgtcatcagcaaactggacggtaccccacttgaccatccatcttcaccacccttt
caccctccatgcacaatagtcatgggttctcgtacattggttgccggtgaaattgagcat
cgtcccaacaaaacaccgtcgcctcggatgcgacaggatagttggcacaacatgtttgat
gtcggtgatcggctcgtgaatgataacagtttgaagacctatacaggacacacgaacgag
gttttgggagcgaggttttctgaaaatggtgctctagtagtttcttgcgggttagataac
acagctcgtatatggttaagtaccgcgtgtatggagctcggcgtattggatcatcccgaa
ccggtcaccacgtgttgcttctccgactgcgggttttttgttgccactgggtgcacggat
tcaatgattcgtctatggaacggaaatgtgtctttgtatacctgcgtggcggcctttcac
acacagaattccagctccagaattctgttcatttctttcttgtcagatacatcgattctc
tctgtttcggatacggaaattctacggtttgactggacgtggtcctccgatgaagagtta
gaatctgattcctttggctacgtcaccaactgccttgccaatgccaatagcaattgctgt
tataactgcgccaccgttactgatgacagacagctcttagctgtgtcaacgtccaaagac
aacatactcctttacaacatcgattcgactgaacagatcttcgaatatgtcggccatact
ggaactgtcaacaccttgcacttctctcccagcacaaatagtgatgagcccccgaaatgg
ctgctctctggctctgctgacaaaactttgaaagtgtggaatgtcgccgacgttgaaaga
gtggaatgctctttgtcgtgcactgctttccatgcagtgtgtcccccagatcaatcaagt
gattttctgattgcaactgttggatcggataaccacattcaagttgtgagtggatcgagt
tgtgagacattgctcactacgaatgacgtggagtcgagtaaggatcaagtagaaatgtgc
gtgttgtcacacagatcgtccatgatggcttggtcaactttgagtggtttggtcaagctg
atgtcgctcgacaagaaagaagttaaaacactcgggcatcactccgacgccagggtgacg
ttgctgaaattcagtccttctgatgttctacttttgacagtcagctctgagggctgtatt
aagatctggaaaccgaggaatgaaactgttactattacgggtcctccaaaaggtgtcgtt
gattgtttctttatcgagtctgaagaaaaaacacttatggtgtgtggagctgatggaagc
atccgactgtggagcatcgacactggccttccaatcagtctaatcttggacaattatggt
ttgaacttgacgtgcgtcgaccgtgcttccaatcgacagtggttggcccagggaaccatc
accgaaggagttcgcatcgtacacattcctttggatgcggaaccgtgttccagtaaacct
gtcaaaaatagcaaaggttttcggaatcccaatcggctaggacatcaggttgtgccggtg
cgagtatgtcgcttcgccaatcacgttcaattaatagcgattggctacgacaacggaaca
atcgaaatttttgattacctacggaacacgctacaagctacactggaggcgcatcagtca
tgggttcgtgatctgcaatggtgtcaaaattctccgttcttccagttggtttctttgggt
gaccgcatcgcatggtgggacttgagctcggctcgttttggaacgtccacctctagtgtg
ctacgtaacccgacgcactccaacgggagcaaccatttggctggaggtatgggcttcccc
ttaacgcccattactccgggctcctctttctcttccgcgtcttccttttcttcctcacgt
ttcattagcactggcaccacgcaatcctcgcacttggatggcttagttcagacggtggaa
tttcaaaccagaggtcgctacgcctccaaacttttcgtttcgtgcgacggccgtgctctc
gtcaccgtgtccgactctggtatcctatacattctccatcagctatcgcaacatgattga

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