Daphnia magna (water flea): 116931039
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Entry
116931039 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116931039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116931039
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116931039
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116931039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
zf-RING_2
HlyD_2
zf-C3HC4_2
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
116931039
NCBI-ProteinID:
XP_032794410
LinkDB
All DBs
Position
LG9:complement(2805153..2808708)
Genome browser
AA seq
733 aa
AA seq
DB search
MEGIADVFRCFICMDKLRDARLCPHCSKLCCFACIRRWLVEQRSQCPHCRLPLRPHELVN
CRWVGDITQQLESLQLQSTPSITPANSISNSASTTDLCDMHSEKLSVYCVTCKSCICHKC
ALWEGTHSGHMFQPLDGMYETHATKIRDGIAQLRRRLLEISMIVQDVERNVESVRTAKDE
KVSEIRHAVELVVSRLDSQLRSKLLSLVGQKNVLTQEIDHLEALLQETETTLQNESKSQL
IAKSGEIMSAMDRAERRAFSSFTLHHVPADFQSEIVPPYNTSVFAIEDFSRMRNNADPIY
SPPLVVDGLKWRLKVYPDGNGIVRGNYLSVFLELTSGVSEPAKYEYRVELVYQGPNNASG
GLSANRNIVREFASEFDAGECWGYNRFFRLDLLASEGYLRPESNSLILRFHVRPPTYYQK
CRDLQRYLSSMLQKHARYLNIIKGFTEGRHDQELVQSDGEENVDVRNQIGSATSSVPDRG
AATVCLSTQTSTLNTSITENDDVLLTDEVFESTSPSQRLLNLTDSVRRLAGGFQSTTLQP
DDEWVSTSSESGTPSLGNDNVVDENNLSEGELELSEAVISVNQYIMQPRFASGSNFDRNV
SASSIRDGDITYPLMDQTFRELNNSSMNGIASNVSVHSFAERDWDQETLEMSSIVPETEQ
PVRTPVRTTRLRSPQSHQRKNRRVRDSTFLLPRLGTSRRRSISPPRSRAPIPSPAPAPQA
AANFSVKGSATEE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagggtattgctgatgtatttcgatgcttcatatgtatggacaagttgagggatgca
agattgtgtccacactgctcaaaactttgttgttttgcttgtattcggagatggcttgtt
gaacaacgttcacaatgtcctcactgtagacttccactaagacctcatgagcttgtgaac
tgtcgttgggttggagatatcactcagcagttagaaagccttcagctgcaaagtactcca
tcaattacaccagccaattcaatatcaaatagtgccagtaccacagatttatgtgatatg
cacagtgaaaaactttcagtctactgtgtcacttgcaagagctgtatttgccataaatgt
gctctttgggaaggtactcattcaggccatatgttccagccgttagatggaatgtacgaa
actcatgcaactaagattcgggacggaatcgcccagttaagacgaagacttctcgaaata
agcatgatcgttcaagatgtggaacgtaatgtcgaaagcgtccggactgctaaagacgaa
aaagtgagcgaaatacgtcatgctgtagaattggttgtatcacgtttagattcacagcta
cgaagtaaacttctgtcattggtgggacaaaaaaatgttctcacacaagaaatagatcac
ttagaagccttgctgcaggaaaccgaaacaacgctgcaaaatgaatccaaaagtcaattg
atagctaaaagtggcgaaattatgtctgcaatggacagggccgaacgacgagcctttagt
tcttttacattacatcacgttccagctgattttcaaagtgaaattgttccaccgtacaat
actagtgtctttgcaattgaagattttagtcgaatgaggaacaacgctgaccccatttac
tcaccccctctagttgtagatggcctaaagtggagacttaaggtttatcctgacggaaat
ggtattgttcgtggtaactacttgtcagtttttctcgaattgactagcggtgtatcagaa
ccagccaaatacgagtatagggtagagctggtctatcaagggccaaataatgcgagcggc
ggcctctccgcaaaccgcaatatagtacgggaattcgccagtgaatttgatgcaggtgaa
tgttggggatataatcgtttctttcgcctcgacctccttgcttccgaaggctatctgaga
ccggaaagtaattctctcatcctacgatttcatgtccgtccaccgacatattaccaaaaa
tgtcgcgaccttcaaagatatctctctagtatgctacaaaaacacgctcgttacttaaat
attataaaaggttttaccgagggtagacacgatcaagaacttgtccaaagtgatggagaa
gaaaacgtagacgtgcgcaatcaaatcggttccgccacctcttcagtaccagatcgtgga
gcagccaccgtatgcctatctacgcaaacttccacgttaaatacatcaataaccgaaaac
gacgacgttttgttaactgacgaagtttttgagagcacttcaccctcccaacgcttgctc
aatttaacggatagtgttcgccgattggctggtggtttccagagcactacgttgcagccg
gatgatgaatgggtgtccactagcagcgaaagcggaactccgagccttggtaatgataac
gtcgttgacgaaaacaacctgagtgagggagaattggaactcagcgaagctgttattagc
gtaaaccaatacattatgcagccacgttttgccagcggaagcaactttgaccgtaacgtc
tccgcgtctagtattcgtgacggagacatcacttacccattaatggatcaaacgtttaga
gaactaaacaactcctcgatgaacgggatagcctccaacgtctctgtgcattcttttgcc
gaacgtgattgggatcaagaaactttggaaatgtcttctatcgtcccggaaacggaacaa
ccggttagaacgcctgtccggacaaccaggttgagaagtcctcagtctcatcagcggaag
aaccgtcgtgtgcgagacagcacatttttgctaccaagattaggtaccagtcgtaggcgc
tctatttctccacctcgcagccgtgcaccaattcccagtccagctcctgctccacaagca
gcggcaaatttttctgtcaaaggcagcgcgacagaagaatga
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