Daphnia magna (water flea): 116932037 Help Entry 116932037         CDS       T07514                                  Name (RefSeq) cadherin-99C isoform X1   KO K16500   protocadherin-15 Organism dmk  Daphnia magna (water flea) Brite KEGG Orthology (KO) [BR:dmk00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:dmk03037]     116932037    04515 Cell adhesion molecules [BR:dmk04515]     116932037 Cilium and associated proteins [BR:dmk03037]  Primary cilia and associated proteins   USH complex and associated proteins    116932037 Cell adhesion molecules [BR:dmk04515]  Cadherins   Protocadherins    116932037 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Fibulin_C Cadherin_2 Motif Other DBs NCBI-GeneID:  116932037 NCBI-ProteinID:  XP_032795629 LinkDB All DBs Position LG10:7168783..7178541 Genome browser AA seq 1605 aa AA seqDB search MCGVDSYKLQSNRRSARFGKARMVLSCRVIALVMMVLCVTIDAEPCDIETGQSNVILDIE ESRGQQTNQSTRPRLLPIIGNEPAGEISLAIASSSKPNVFSLTGKELKLTSPLDRDHQDI SSVILQISCTNKISGRRRSIPVIVRISDINDKAPVFLNSSYSVTIPEDLPVGGTVVRDIE AKDADAGINALVEYKVVPNAQRMRSGSTNSSSAPSLFDSPLDASDGFGMFEFPAAHVPVL TLKQPLDYESTRRYLVTIVASDRAVSAKDRLSSTTTLTVNVGDVEDQPPAFQYVGCPLNN RGICVTPTYTTTVISGVTSGLLTLNPDRILAVDTDPSSRAAIRYSFEEGNPANFHEYFEI NPNSGWVKQIKAANRSIVNKFDLIVKAEEVTPKKRFSNAVLSIDVGNDNNFAPRLVAEAL EGFVDENSPVGTPVISARRKGQPLQLKVVEEDTQSENSFSHYEIELTSPAFRVNKVGIME VAIPNLDRDAPNPSVLTFQAIARRAGGATTSPIAISIRLMDVNDNAPRFPSFKPVFLQAG DSKKVVTQVQAEDKDWSDNGRIEYAILDVTNNGKNKFIINPQMGVIDSVGALKSGEKYTL TLQATDGGGKSSLGLLEVIVIPGPNIKAPAFTKESYEISVDEASPVNSVVYTFQAKDQEN DRIIYSIVAGNELGHFKMEKSNGSLLLAETIDREQLSRYVLTVKAEDSGGLSSVAQVMIR VLDSNDRSPEFVDLPYIFRVKENDITGYIGRVHAKDADIEKNGQISYSLPSDPNFVINSQ TGELKSKAPLDYETERVHLVVIAAQDSGSQPRVTTATATVVVLDFPDERPKFSQQKYEAD VPENIIDFFVTQVQATDMDSESSVTYTIRQGDVDKFRIDPQSGIVRTRRALDYERQAQYV LVIGTIENTEINDPQATTTLFVNVQDRNDVAPVYSSLPRPVRLRSTVPVGQVVTTVIAFD GDGTNPNNQVRYELVNNSNKVGQFFRINAESGVISTRDNLRKDSEREYKLRIRAYDLGKP TSLSTLATVTVLVDHVAPLIAPDVTHMSFSEMTYSVSVAEDAHANTLIKYLSVVNRTNDL LSVSCEIISGNSDDTFYTKESVDRNCELRLKRTLDFEVIQRYEIEIQLKTTATFLNQDRP TVRVDVTVLDVNDNSPKFLSKYPENRFTNGKFYAAISADAPISSVLVLVAAEDADSGPLG QLTYEIMEETNVGKLFSIDKSTGAIHTEKMMNAIRQLPMRLIVTARDNPGQPIGYRETNC QVVVNIIEPQHRLVLVLPNSPPDQVHRSQSAIVDILQEETKMIVRVEKLQALSSVSSNGT VIVDASGSELWFYCIDPGTETIVVTNHSQINSTVLEMGSTNHLAYLMATKLKLDVSEIRQ PLDNRWSSKPYDTDTPASRLWNGFPAALVVVGVLVFLLALGGIVYICASWDSRLQSKADK RVQPYVVFPPYNPVVIDPNPKEYETQILQLSVNNSTDDSESSGDHNLEYNPRRHRAFPLS VPAYIPGRHLNGALNSANSDIATLRFSSLAGMGHCEFAPHQFFPEQEEEDLSSMIIYDDP PIPTTNPLYEGSDEDPLNYTSATNANVTFRSKLSRFGIPEVSTEL NT seq 4818 nt NT seq  +upstreamnt  +downstreamnt atgtgtggcgtggacagttacaagttgcagagcaacaggaggagcgccaggttcggcaag gccaggatggtattatcatgccgagtcattgccctcgtcatgatggtcctgtgcgtcact attgatgctgaaccctgtgacatcgaaacgggccagtcaaatgtcatcctggacattgaa gagagccgagggcaacaaacgaaccagagcactcggccaagactgctgcccattattggc aacgagcctgctggtgaaatcagtttggccatagccagttccagcaaaccgaacgtgttc tctctgacgggcaaagaattgaaattgacgtctcctttggatcgcgatcatcaagacatt tcgtccgtcatcctccaaatctcctgcacgaacaagatcagtggccgtcgacgaagtatt cccgttattgttaggatctcggatatcaatgacaaagcgcccgttttcctcaacagctct tacagcgtcaccatccctgaggatttgccggttggtgggactgtcgttcgcgatattgag gccaaagatgcggacgccggaatcaacgctctggtggagtacaaagtggtgccgaacgct cagcggatgcgtagcggaagcaccaattcttcatcagcaccttctctctttgatagtcct ttggacgcttccgacggctttggcatgtttgaatttcccgccgcacatgttcccgttctt accttgaaacagccccttgattacgaatcgactcgccgctatttggtgactatcgtcgct tcggaccgagcggtcagtgccaaagaccgcctgtcatcgacgaccactttaacggtcaac gtcggcgacgttgaagatcaaccgcccgctttccagtacgttggctgcccgttgaacaat cgcggcatctgcgtcactccgacatacacgacgacagtcatcagtggcgtgacgtcgggt ttgttgacgttgaatccggatagaattttggccgtcgacacggacccatcgagtcgggct gccattcgctacagtttcgaagaagggaatcctgccaatttccacgagtactttgaaatc aatcccaactccggctgggtaaagcagattaaggcagccaatcgttccattgtcaacaaa ttcgatttgatcgtcaaggctgaagaagtgacgccaaagaaaagattctccaatgccgtg ttgagcattgacgtgggaaatgataataactttgcgcctcggttggtggcagaagcgctc gagggtttcgtcgatgagaattcgccggttggaacacctgtcatttcggcgagaagaaaa gggcaaccactgcaactcaaggtcgtcgaagaagacacgcaatctgagaattcgttttcc cactacgaaattgagctgacttcgcctgctttccgagtcaacaaggtcggcattatggaa gtagctatacccaatttggatcgcgacgcacccaatccatcggtactgactttccaggcg atcgctcgaagagctggaggagctaccacgtcaccgattgcaatttcgattcgtcttatg gacgtgaacgataatgctccacggtttccttcgtttaaaccggtctttcttcaagcgggc gattcaaaaaaagtagtaactcaggtgcaagccgaagacaaggattggagtgataatgga cgaattgaatatgctattttggatgtcacgaataatggcaagaacaagtttattattaat ccacaaatgggggtgattgattcagttggagctctgaaatctggagaaaagtatacactt acacttcaggcaacagatggaggaggtaaatcatctttgggtctattggaagtcattgtc attcctggaccaaatatcaaggcaccagcattcacaaaggagtcatatgaaatttctgtt gatgaggcatctccagtcaattctgttgtttatacttttcaggccaaagatcaggaaaat gatcgtattatatactccatagtggcaggcaacgaactagggcacttcaagatggaaaag tccaatggaagtctcctgcttgctgaaacaatagatcgagaacaactcagtcgttatgtt ctcacagtcaaagctgaggattctggaggattgtccagtgtggcccaggttatgattcgg gtacttgattccaacgataggagtccggagtttgtggatctaccgtacattttccgcgtc aaggaaaatgacattaccggctacattggccgagtccatgcaaaggatgctgacattgaa aagaatggccaaatttcgtattcactaccttccgatcctaactttgtcatcaatagtcaa actggcgagttaaagtctaaggcacccctagactacgaaacggagcgggttcatctagtg gttatagcagctcaagatagcggttcgcagccacgggtaacgactgcaacagccactgtt gtcgtgttagatttccccgacgagagaccaaaattctcccagcaaaaatacgaagccgat gtaccggagaacattatagatttctttgtcacccaagttcaggctaccgacatggacagt gaatcgtccgtgacatataccatccgtcagggggacgtcgacaaatttagaatcgaccct cagtcaggaattgttcgcacaaggcgtgcgcttgattacgagcgccaggcacagtatgtc cttgtaatcggaactatcgagaatacggaaataaacgatccgcaggcgacaactaccctc ttcgtcaacgtccaggaccggaatgatgtggcccctgtctacagttctttgccgcggcca gtacgcctcaggagcacggtccctgttggccaagtcgtcacaactgttatagcttttgat ggtgacggaacgaacccaaataaccaagtgagatacgaattagtgaacaattcaaacaaa gttgggcaattcttccgtatcaatgccgagtctggtgtcatctcaacccgagacaatcta cgtaaagacagtgaacgtgaatacaagttgaggattagagcgtatgacctcggaaaacct acttcactgagtaccctagctactgtcactgtattggttgatcacgtcgctccgctcatt gcaccagacgtgacgcatatgtcgttttcggaaatgacttattcagtgtccgtcgccgaa gatgcgcatgcaaatacgcttatcaaatatttatccgtcgtcaacagaaccaatgacttg ttgtctgtttcatgcgagattattagcggaaattccgacgatacattctacacgaaagaa tcagtagatcgcaattgtgaattgcggcttaaacgaactcttgactttgaagtcatccaa cgctacgagattgaaattcaattaaaaactacagccacctttttaaatcaagacagacct acagtcagggtggacgttacggtgctggacgtgaacgataattcccccaaattcttgtcc aagtacccggaaaatcgctttactaatggaaagttctacgcagcgatctcggctgatgcg cctatctcttccgttttggttcttgttgctgccgaagatgctgacagtggtccacttggc cagctcacttacgaaatcatggaagagaccaacgttggcaaattattcagtattgacaaa tcgactggagctattcataccgaaaaaatgatgaacgcaattcggcaactgcctatgcgg ctaattgtgactgcaagagataatcctggccaaccaatcggctatcgagagactaattgt caagtggtcgtgaacattatagaacctcaacaccgattagttctcgtcttgcccaattcc ccgcccgatcaagtccatcgctctcaatctgcaatagtggatattttgcaagaagaaacc aaaatgattgttcgcgttgagaagcttcaagcgctctctagtgtgtcatctaacggcaca gtaatcgttgacgcatctggctcagaactttggttctattgtatcgatcctggcacggaa acgattgtggttacaaatcacagtcagattaacagcactgtattggaaatgggatctacg aatcatctggcctaccttatggcaacgaaactcaagttagatgtatctgaaatccgccag ccgctggataatcgttggtcctctaagccatatgatacggatactccagccagtcgcctt tggaacggttttcctgcagcccttgttgttgtgggggtcttggtctttttgctcgcccta ggcggcattgtttatatctgcgcatcatgggacagtaggttgcaaagcaaggccgacaaa cgtgtgcagccatatgtggtatttccgccatataatcctgttgttattgaccctaatcca aaagaatatgaaacccagatactgcagctcagtgtcaataatagtactgacgattcggaa tcaagtggtgatcacaacttggaatacaacccgcgaaggcatcgcgctttccctctctct gtgcctgcttacattccaggtcgtcatctcaatggtgcattgaattcagccaactctgat attgcgacgctacgcttttccagtctagctggcatggggcattgtgaatttgccccccat cagtttttccctgagcaagaagaagaggatttatcgtctatgatcatctatgatgatcca cccattcctacaactaatccgctttatgaaggatctgatgaagatccgctgaattacaca agcgcgaccaatgccaacgttaccttcaggagtaaactttcgcgctttggcattcctgag gtgtctacagagctctga

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