Desulfonema magnum: dnm_055080 Help Entry dnm_055080        CDS       T07102                                  Symbol ligA1 Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism dmm  Desulfonema magnum Pathway dmm03030   DNA replication dmm03410   Base excision repair dmm03420   Nucleotide excision repair dmm03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dmm00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     dnm_055080 (ligA1)    03410 Base excision repair     dnm_055080 (ligA1)    03420 Nucleotide excision repair     dnm_055080 (ligA1)    03430 Mismatch repair     dnm_055080 (ligA1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dmm03032]     dnm_055080 (ligA1)    03400 DNA repair and recombination proteins [BR:dmm03400]     dnm_055080 (ligA1) Enzymes [BR:dmm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      dnm_055080 (ligA1) DNA replication proteins [BR:dmm03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      dnm_055080 (ligA1) DNA repair and recombination proteins [BR:dmm03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      dnm_055080 (ligA1)    NER (nucleotide excision repair)     GGR (global genome repair) factors      dnm_055080 (ligA1)    MMR (mismatch excision repair)     DNA ligase      dnm_055080 (ligA1)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       dnm_055080 (ligA1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia PTCB-BRCT DNA_ligase_ZBD HHH BRCT_2 DUF4796_N RUBY_RBDX Mustang Motif Other DBs NCBI-ProteinID:  QTA89454 UniProt:  A0A975BQQ6 LinkDB All DBs Position complement(4380875..4382938) Genome browser AA seq 687 aa AA seqDB search MSSNIEPAVTEKIENLRNALHRHNYQYYVLDDPEISDAEYDRMMQELIALESAHPELASP DSPSSRVGGIPLDKFESVAHSVPMLSLDNGFNDSDILEFDKRVRKNLGLPPRSQATLREQ KGNVADELLYTAEPKMDGVAVELVYENGRLVMASTRGDGVRGEVITSNVKTIPSVPLLLN QENGRKIPSRVEVRGEIFMKADRFRKLNEERLRMNLSPFANPRNAAAGSLRQLDPRITAK RPLEIFLYGIGRITDLEFESHWDSLQALKGLGFRINPLIRPGITIQDTLDYYKELSEKRH NLPYDIDGMVIKVDNLLFQSQLGATSKSPRWAIAYKFKAVQETTRIMSIDVQVGRTGALT PVARLEPVNVGGVMVSNATLHNEDEIRRKDIRVGDTVLVQRAGDVIPEVVKVIGSKRTGA EQIFNMPQTCPVCGAEVVDRDEAVSRCNNMNCPAQIKARIRHFASKRAFDIEGLGDKLVE QLVSRGLISSYADIFNLDKENLQRLERMGPKSAANLINAVEASKKITFDRFLYALGIRHV GENVAGILADKFESADKLCSASLNELTAAEGIGPEIAQSVRHFFEQDENRKTVARILDSG VEILFEAKPENRPLEGKLFVLTGSLEGMTRSEAQKMIEAAGGKMTNSVSRNTDYLVLGKS PGSKLARAKKLGIEIIRESDLDKLIKI NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt atgtcaagcaatatagaaccggcagtaactgaaaaaattgaaaacctgagaaacgcgctc cacaggcataattaccagtattatgtcctggacgatcctgaaatatcggacgcggaatat gaccgaatgatgcaggaactcatcgcgttggaaagcgcacatccggaacttgccagcccg gactctccttcttcaagagtggggggaatccctcttgacaaatttgaatctgtcgcacat tctgttcccatgctgagtctggataacggctttaatgattcggatatccttgaatttgac aagcgtgtcagaaagaatctggggcttccccctcgttctcaggcaacactccgggaacag aagggaaacgttgcagatgaactcctttataccgcagaacccaaaatggacggggtggcg gtggagcttgtctatgaaaatggcagactggtcatggcttccacacggggggacggggta agaggtgaggtcatcacatccaatgtgaaaaccatcccctcggttccgcttttgctgaat caggaaaacggccggaagattccctcccgagtcgaagtgaggggagagatttttatgaaa gcagaccggttcagaaaattaaacgaagaacggctgcgtatgaatctgtctccgtttgcc aatccgagaaatgccgcggccggatcactcaggcagcttgacccccggataactgcaaaa cggcctttggaaatttttttatacggaataggacgtattactgatcttgagtttgaatcc cactgggacagcctgcaagctctaaagggtctgggattcagaattaatccgctgatcagg cccgggatcacgattcaggacacccttgactattataaggaactcagtgaaaaacggcat aatctgccatatgatattgacggcatggtcataaaagtggataatcttttatttcagagc cagctgggagcgacttccaaaagcccgcgctgggccatcgcgtataagttcaaggcagtg caggaaaccacccggattatgagcatagatgttcaggtggggcgtaccggtgcgctcacg cctgttgcccggcttgaaccggtcaatgtgggcggggtgatggtgagcaatgccacgctt cataacgaagatgagatcagacgaaaagatatcagagtcggggatacggttctggttcag cgggccggggatgtgattcccgaagtggtgaaagtgatcggatcaaagcggacaggagcg gaacagatctttaatatgccgcaaacctgtccggtatgcggggctgaagttgttgaccgg gacgaggcggtttcaagatgcaataacatgaactgtcccgctcagataaaagcgcgtatc aggcattttgcatccaaacgggcgtttgacatagaggggctgggtgacaaacttgtggaa cagctggtctccaggggactgatatcttcttatgcggatatttttaatctggataaggag aatttgcagcgtctggaacgcatgggaccgaaatcggctgcaaatcttatcaatgctgtt gaagcaagtaagaaaatcacctttgaccgttttctttatgccctgggtatccggcatgtg ggagaaaatgtggcgggcattcttgcggataaatttgaaagtgcggataagctttgttcc gcgtctcttaatgaactgacagcggccgagggcatcggtcctgagattgcccaaagtgtc agacatttttttgaacaggatgaaaatcgaaaaacagtggcgcgtatcctggacagcggg gtggaaattctttttgaagcaaaaccggaaaacagaccattggaaggaaaattgtttgtg ctgaccggctcccttgaaggcatgacaagaagcgaagcgcagaaaatgattgaggcggca ggtggtaaaatgaccaattccgtaagtcgaaacacagattatcttgttctcggcaaatcc ccgggatccaaactcgcccgggccaaaaaactgggcattgaaattatccgagaatcagac ttagataaattgattaaaatttaa

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