Drosophila miranda: 108153036
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Entry
108153036 CDS
T06132
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dmn
Drosophila miranda
Pathway
dmn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108153036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108153036
Enzymes [BR:
dmn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
108153036
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108153036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
108153036
NCBI-ProteinID:
XP_017138279
LinkDB
All DBs
Position
XR:31672803..31676273
Genome browser
AA seq
916 aa
AA seq
DB search
MDIATTVKFRDVCELFEKVKAAKKVQDKEDVLRSYYESFCRHREAFRQAAGLTDEQSENG
SSSFHSVLRLLLPSADTRRDNYGLQITALGRLYTRVLQLTRDSRDAIMLQHRTGSSFRDY
GDVVYAVLVSRCFNPPSDLRLNAIHEMLDTIANEDTSVKEQELIRFTEQASAREQKWLIR
ILLKSLGLGIGEQRIFGVLHPNAKDIYQRCSDLSHVCNLVADKVSDLEVSDTKIKGNSHP
STVNLNAVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYLS
RNGVDYSNNFGESYSRGTLTPQLRGLLPLGLQTIILDGEMMVWDTNQKRYREKGENTDVK
NLKPDRSWRPCFVVYDLLYFNGQSLLDLTYIQRSYKLQKLIGEQQGVLQLMRGTKVGSIE
EFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKADYIKGLITEFDVLIIGGFY
NRKRTFIDSFLLGVLQPMANSDSRHEVYSIGCVTNNTRQAVVLNHTLRPHWHDTTKEPPP
LWFHYMANEKIGSPDLWIDPHNSIILQVKAADLTPNSAFYTPKALHFPRIELKRDDKAWN
ECMTLQEFNQLCEGSGPIKKLNKRHLCLDDLTTKRKRLRMTPAERRRLGLAIYEKRYDVG
TSSSCTKLFEGLSFCILSGAPGQSKHKLQELAAKNGGCIVENPLPNDPKCFCIAGDQTFL
VKRLMQQQPCTSDIVRMEWLIRVCQEQELQLRPKDLLSATEPLQDDLAEWFDKLGDSYTK
DFASVDELLELLQDIGKEELAVDYVSQSEINAFEDKLLGQVTQNIFRDLHAYFYDPKGDE
LGKVLFLQNGGTLAGESDPQLNLVFVCLSSDIDDNYFESWLHNHLSSYSGEVLNSAWIYQ
SHRERRLLKMSCFSFK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggatatagccacaaccgtaaagtttcgtgatgtctgcgagctgttcgaaaaggtcaag
gcggcaaagaaggttcaagacaaagaggatgtgctgagaagctactatgagtcgttctgc
cgacatcgggaggcatttcgccaggcggctggcttaacggacgagcagagtgagaatggc
tccagcagcttccactcggtcctgcgtctcctgttgcccagtgcagacactagaagagac
aactatggcctgcaaataacagctctgggccgtctctacaccagagtgctgcagctaacc
agggactctcgcgatgccataatgctgcagcatcgtactggctcctcgtttcgggactac
ggagatgtggtctatgccgtacttgtgtcccgttgctttaatccgccaagcgatctgcgt
ctcaacgccatccacgaaatgctagatacaattgccaatgaagatacatcagttaaggaa
caggaactgatacgtttcacagaacaagcctcggccagggagcagaagtggctaatccga
attctcctaaagtccctgggattgggcataggggagcagcgcattttcggagttctgcat
ccgaatgctaaggacatttaccagcgctgctcagatctaagtcacgtctgtaatttagtt
gccgataaggtatctgacctggaagtcagcgacacgaagatcaaaggcaacagccaccca
tcaactgttaatctgaacgcagtcataaggcccttccatcagatccgtcccatgctttgc
gagcgttttcccggcgacattcaggagcttatgcaatccgacgttctatatctggagacc
aaaatggatggcgagcgtttccaactgcatattgatcgcggtcgattcatgtacctttcc
cgaaacggagtggactattctaacaattttggcgaaagctatagccggggaacgttgacg
ccacaattgcgtggtcttttgccgctcggcctgcagacgatcatcctcgatggcgagatg
atggtttgggacaccaaccaaaagaggtatcgcgaaaagggcgagaacacggatgtaaaa
aatctaaagcccgatcgaagctggcggccttgttttgtggtctacgatctactgtacttc
aatggccagagtctgctcgatttgacatacatccaacgatcctacaagctccaaaagttg
atcggcgaacagcaaggagtgctgcagctgatgcgcggcaccaaggttggctcaatcgag
gaattcaacaaactcttccagcaagcccttgactccaatgccgaaggcattgttctaaaa
aagcagagctccatctaccagccgggagttcgagtcggcgggggatggtacaaggataag
gcagattacatcaagggtctcataaccgaattcgatgttctcatcattggaggcttttat
aatcgcaagcgcacatttatcgattcgtttctactaggcgttctccagccaatggctaat
agcgacagtcgtcatgaggtgtacagcattggttgcgttaccaataatacgagacaagca
gtggtgctgaatcatacgctgaggccacactggcacgatactaccaaggagccgccgcca
ctatggtttcattacatggccaacgaaaagattggctccccggatctgtggatcgatcca
cacaattcgattatcttgcaggttaaggcggcggatttgacacccaatagtgccttctat
acgcccaaagctttgcactttccacgcatcgaactgaagcgcgacgataaggcctggaat
gaatgcatgacgctacaggagtttaaccagctgtgtgagggctctggtccgatcaagaaa
ctgaacaagcgtcacctgtgtttggatgatttgaccacgaaacgaaaacgtctacgcatg
acgcccgcagagcgcaggcgtctaggtctggccatatacgagaagcgctacgatgtcggg
acgagttctagctgcacaaaacttttcgaaggccttagtttctgcatcttgagtggtgcg
ccaggccagagcaagcacaaactgcaagaattggcagccaagaatggtggctgcattgtg
gagaatccgctgcccaacgatccgaaatgcttctgtatagcaggagatcagacgttcctg
gtaaagcgactaatgcagcagcaaccgtgcaccagcgatattgtgcgcatggagtggctg
atacgcgtctgtcaggagcaagagctccagctacgtccaaaagatttgctttcggccacc
gagccactacaggatgatttggccgaatggtttgacaaattaggggacagctatacaaag
gactttgcgagcgttgatgaactgctcgaattactacaggacatcggtaaggaggagctt
gccgtcgactatgtgtcacagtccgaaatcaatgccttcgaagacaagttgctgggccag
gtcacacaaaacatattccgtgacttgcatgcctacttctatgatccaaagggcgacgaa
ctgggcaaagttttgttcctgcagaatggcggcacgctggcaggcgaatctgacccccaa
ctaaaccttgtatttgtatgcctgtcttcggatatagacgataattactttgagtcgtgg
ctacataaccatttaagttcgtattctggcgaagtccttaactctgcatggatctatcaa
tcgcaccgtgaacgccgccttctaaaaatgagttgtttttcgtttaagtag
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