Drosophila miranda: 108154899
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Entry
108154899 CDS
T06132
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108154899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
108154899
Spliceosome [BR:
dmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108154899
Complex C
U5 SnRNP specific factors
108154899
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Dynamin_N
Ras
Septin
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
108154899
NCBI-ProteinID:
XP_017140837
LinkDB
All DBs
Position
2:complement(8732453..8736009)
Genome browser
AA seq
975 aa
AA seq
DB search
MDSDLYDEFGNYIGPDLDSDEDDDQSIYGQPDVQDDQDDAMDEDEAEPPEDEDKEVTAVV
LHEDKRYYPSAVEVYGPDVETIVQEEDAQPLDKPLIEPIKKLKFQIKEQEQQDTTYDMEF
MADLMDTPPLIRNVALIGHLHHGKTTFVDCLIRQTHPQFETMEERSLRYTDTLFTEQERG
CSIKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDETTAAMRMSDGVVLFIDAAEGIMLN
TERLLKHAVQERQSITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGSADDN
LLVSPILGNVCFSSSLYGFCFTLKSFAKLYADTYEGVNYIDFAKRLWGDMYFNSKTRKFS
KKQPHSSAQRSFVEFILEPMYKLIAQVVGDVDSTLSDTLAELNVRVSKEEMKSNMRPLLR
LVCNRFMGDCSGFVDMCVEHIKSPQENAKRKVDHIYTGPKEGDIYRDMITCNQYGTLMVH
SSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVFEARY
KVELNRVPSGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVNP
SELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVETSSLKCFAETPNKKNKLTMISEPLEKGLAEDIENGTVCISWNKKRIGEF
FQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREG
PLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQ
APADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVLVNYPL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggattccgatttatacgatgagttcggcaactacattggccccgatctggatagcgac
gaggatgatgaccaaagtatctatgggcaacctgacgtgcaggatgaccaagatgacgcc
atggacgaggacgaagcagaaccgccagaagatgaggacaaggaagtgacagcggttgta
ctgcacgaggataaacgctattatccttcggccgtggaggtttatggtccggatgtggaa
accatagtgcaggaagaggatgcccagccactggacaagccactcattgagccgataaag
aagctcaagttccaaattaaggagcaggaacagcaggacaccacatatgacatggaattt
atggctgatctaatggacacgccgccactcatcagaaacgtggcactcattgggcacctt
catcacggcaagacgacattcgttgattgcctgattcggcaaacgcatccccaattcgaa
accatggaggagcgctctttgcgctacacagacacgctcttcaccgaacaggaacgcgga
tgcagcattaaggccaccccagtcacccttgttctgcaggatgtcaagcaaaagagctac
ttgctgaatattttcgacactcccggtcatgttaatttctcggacgagaccactgctgcc
atgcgtatgagcgacggcgttgttttgttcatcgatgcggcagagggtattatgctgaac
acggaacgcttgctaaagcatgctgtacaggagcggcagtccattaccgtgtgcatcaac
aagattgatcgtctcattctggagctcaagctgccgccccaagatgcgtactttaagctg
aagcatatagtagaggaggtcaatgggctactgagcacatatggcagtgcagatgacaac
ctgttggtgtctccgattttgggcaatgtctgcttttccagttcgctatatggcttttgc
ttcaccttgaaatcgtttgccaaactctatgcggacacatatgagggcgttaactacatt
gactttgccaaacgactctggggcgatatgtacttcaacagcaaaacccgaaagttttcc
aagaaacagccgcatagctctgctcagcgtagtttcgtggagttcatactggagcccatg
tacaagctgattgcccaggttgtgggcgacgtggacagcacgctgtcggacacgctcgcc
gagctgaatgtacgcgtttccaaggaggaaatgaaatcgaatatgcggccgctgctgcga
ctcgtctgcaatcgattcatgggtgactgcagcggtttcgtggatatgtgcgtggagcac
atcaaatcgccacaggagaatgccaagcggaaggtggaccacatttatacggggccaaaa
gagggggacatctatcgcgacatgataacctgcaatcaatatggcacactgatggtccac
agctcgaagatgtatcccaacgatgattgtacctttttccaggtgctggcacggattgtt
tccggcaccctgcatgccggtcaggaggtgcgtgttttgggagagaactacacgcttcag
gatgaggaggattcccgaatactgcaagtcggtcgactgtgggtgttcgaggctcggtat
aaagtcgagctaaaccgagttccttccggtaattgggtcctcattgagggcatcgatcag
tgcatcgttaaaacctctaccattgtggacatcaatgtcccagaggatctctacatattc
cgaccactcaagttcaacactcagagcattataaagattgccgtggagccagtgaatccc
tcggagctgccgaaaatgctcgacggtctgcggaaggtgaacaaatcctatccgctgctc
tcgacccgtgtcgaggagtccggtgagcacgttatcctgggcacaggcgagttgtatctg
gactgcgtcatgcatgatctgcgcaaaatgtactcggagatcgacataaaggtggccgat
cctgtggtagccttctgtgagactgtcgtggaaaccagttccctcaagtgtttcgcagag
acgccaaacaaaaagaacaaattaaccatgatatcagagccgctggagaagggcctggcc
gaagacattgagaacggaaccgtttgcatcagttggaacaagaaacgcatcggagagttc
tttcaggtcaactacgactgggatttgttggccgcgcgttccatttgggcattcggcccc
gattcaactggtcccaacattcttgtggacgacaccctaccctcggaggtggacaagaat
ctgctgacggcggtgaaggactccattgtgcagggctttcaatggggaacgcgcgagggt
ccgctctgtgaggagcccatacgaaacgtcaaattcaagatactcgacggagtcattgcc
aacgaggctctgcatcgcggtggtggccaaatcattcccacagctcgtcgcgtggcctac
tctgcgttcctcatggccacgccacgtctaatggagccgtacctatttgttgaggtccag
gcgcccgcagattgtgtgtcggcggtctacacggtattggccaggcgcagaggccatgtg
acacaggatgcccccgtttccggttcacccatctatacgatcaaagcatttatacccgcc
atcgattcgttcggctttgagacagatctgcgaacgcatacccagggtcaggcattctgt
ttgtcagtgttccatcactggcaaattgtgcccggcgatcccctggacaagagtatcatc
attcggccgcttgagccccagcaggcatcgcatttggcacgcgaattcatgatcaagaca
cgacgccgcaaaggcctctccgaggatgtgtccattaacaagttcttcgacgatcccatg
ttgctggaattggcccgtcaggacgtactcgttaactatccgctgtag
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