Oceanidesulfovibrio marinus: E8L03_07940
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Entry
E8L03_07940 CDS
T06743
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms00300
Lysine biosynthesis
dms00550
Peptidoglycan biosynthesis
dms01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E8L03_07940
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E8L03_07940
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dms01011
]
E8L03_07940
Enzymes [BR:
dms01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
E8L03_07940
Peptidoglycan biosynthesis and degradation proteins [BR:
dms01011
]
Precursor biosynthesis
Amino acid ligase
E8L03_07940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QJT08863
LinkDB
All DBs
Position
complement(1775505..1776998)
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AA seq
497 aa
AA seq
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MMKAMFEELIEKVSRGLIVRTHSGRVQPGEAFLALPSTGGKSGLDFVDQAIERGATWVVT
GESGADMASTDTDGVYWVVVDDVRAALGRLATAHFNTRILPFPLVGVTGTNGKTTVCHLL
EHLFRATGRYTGLLGTIRERWPGEDRPAELTTQGCWELHECMAAMIDAGVEAAFMEVSSH
ALDQNRVAGLQFACAVLTNLTQDHLDYHKDMESYGQAKAILFENLPEADKYSVLNWDDEF
GRTLLPRVVNPVGYGMGEMPETILRNDGWGLAGSLVKSSIDGMVLAVECMGGPYDGDGFN
LQTGLVGAYNAHNLLAAMAAGLSLGLHPDDLSALADFHGVPGRLERVAASSGLNIFVDYA
HTPDALDNVLREMRPLTEGKLVTVFGCGGDRDRTKRPLMAQAACKYSDIVVLTSDNPRTE
DPQAILDDVNAGMAGCAESVTEVDRRKAIGIALDLVRPGDALLVAGKGHEDYQIIGREKR
PFSDQAVIREYLEGEIA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggcaatgtttgaggaattgatcgagaaggtctcgcggggtctgatcgtgcgg
acccactccggccgggtgcagccgggcgaggcgtttctcgcgctaccgtccaccggcggc
aagtccggactggactttgtggatcaggccatcgaacgcggcgcgacctgggtggtcacc
ggggagtcgggagcggatatggcttccaccgacaccgacggcgtgtattgggttgtggtg
gacgacgttcgcgcagcccttggccggctcgccacggcgcacttcaatacgcgcatcctg
ccgttcccgctggtcggcgtgaccggcaccaacggcaagaccacggtctgccatcttctg
gagcacctgttccgcgccacaggccgctacaccggtctgctgggcaccattcgcgagcgc
tggcccggcgaggatcggccggccgagctcaccacgcagggctgctgggagctgcacgag
tgcatggccgcgatgatcgacgccggcgtggaggctgcgttcatggaggtttcctcccat
gccctggaccagaaccgcgtggccggtctgcagttcgcctgcgccgtgctcaccaacctg
acccaggaccacctggactaccacaaggacatggagtcctacggccaagccaaggccatc
cttttcgagaatctgcccgaggcggacaagtactccgtgctcaactgggacgacgagttc
ggccgcaccctgctgccgcgggtggtgaacccggtgggctacggcatgggcgagatgccg
gagaccatcctgcgcaacgacggctgggggctggccggatcgctggtcaaatcctccatc
gacggcatggtcctggccgtggagtgcatgggcggcccgtatgacggcgacgggttcaac
ctgcagaccgggctcgtgggcgcgtacaacgcccacaacctgctggcggccatggccgcc
gggctgagcctgggcctgcacccggacgacctcagcgcgctggccgacttccacggcgtg
cccggcaggctggagcgcgtggctgcttccagcgggctgaacatctttgtggactatgcg
cacaccccggacgccctggacaacgtgctgcgcgagatgcggcccctgaccgagggcaag
ctggtcaccgtgttcggctgtggcggcgaccgcgaccgcaccaagcgcccgctcatggcc
caggccgcctgcaagtacagcgacatcgtggtgctcacgtcagacaacccgcgcaccgaa
gatccccaggctatcctggacgacgtcaacgccggcatggccggttgcgccgagtccgtt
accgaggtggaccgccgcaaggccattggcatcgccctggacctggtgcggcctggcgac
gccttgctcgtggccggcaaggggcacgaggactatcagatcatcggccgcgagaagcgg
cccttcagcgaccaggccgtgatccgcgagtatttggagggcgagatcgcatga
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