Drosophila navojoa: 108660053
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Entry
108660053 CDS
T05898
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dnv
Drosophila navojoa
Pathway
dnv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108660053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnv03041
]
108660053
Spliceosome [BR:
dnv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108660053
Complex C
U5 SnRNP specific factors
108660053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
108660053
NCBI-ProteinID:
XP_017968800
UniProt:
A0A484BND6
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MDSDLYDEFGNYIGPDLDSDDDDDQSIYGQPDVQDDQDEDAMDEDEAEPQDDEDKEVTAV
VLHEDKRYYPSAVEVYGPDVETIVQEEDAQPLDKPLIEPVKKLKFQIKEQDLPETTYDME
FMADLMDTPPLIRNVALIGHLHHGKTTFVDCLIRQTHPQFENMEERSLRYTDTLFTEQER
GCSIKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDASEGVML
NTERLLKHAVQERLAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNSLLSTYGSADD
NLMVSPVLGNVCFASSLYGFCFTLKSFAKLYADTYEGVNYNEFAKRLWGDMYFHSKSRKF
TKKPPHNSAQRSFVEFILEPMYKLIAQVVGDVDTTLADTLSELHVRVSKDEMKSNIRPLL
RVVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIYTGPKEGDIYRDMISCNQYGTLMV
HSSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVYEAR
YKVELNRVPSGNWVLIEGIDQCIVKTSSIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVN
PSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVA
DPVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENETVCINWNKKRIGE
FFQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTRE
GPLCEEPIRNVKFKILDAVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEV
QAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAF
CLSVFHHWQIVPGDPLDKSIVIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDP
MLLELARQDVLLNYPL
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggattctgacttgtatgatgagttcggaaactatataggacctgatttggacagcgat
gatgatgatgatcaaagtatttatggtcagcccgatgttcaggatgatcaagatgaggat
gccatggatgaggatgaagcggagccacaagatgatgaggataaagaagtaacagcagtt
gtgttacatgaggataaacgctactacccatcggccgtcgaggtgtatgggccggacgtg
gagacgattgtgcaggaggaggatgcacaaccgttggacaagccgctcatagagcccgtg
aagaagctgaaattccagattaaggaacaggatctgcccgaaactacttacgatatggaa
ttcatggctgatctcatggacacgccaccattgattcgaaacgttgcgcttatcggtcac
ttgcaccatggcaagactacatttgtggactgtctaatacgtcaaacgcatccacagttt
gagaacatggaggagcgctcgctgcgctacaccgacacgcttttcacggaacaggagcgc
ggctgcagcatcaaggccacaccggttacgcttgtcttgcaggatgtcaagcagaagagc
tacttgctaaacatctttgacacgcccggccatgtgaatttctcggacgaagccactgct
gcaatgcgcatgagtgacggcgtggtgctctttattgatgcgtccgaaggagtcatgctg
aacaccgaacgtctgctcaagcatgctgtgcaggaacggctagcgattactgtgtgcatc
aataagatcgatcgcttaattttggagctcaagctgccgcctcaagacgcttacttcaag
ctaaagcacattgtcgaggaagtcaacagcttgttgagcacctacggcagtgcggatgat
aatctgatggtttcgcctgtgctaggcaacgtttgctttgccagctctttgtacggcttt
tgttttaccctaaagtccttcgccaagctctatgcggatacgtatgagggcgtgaattac
aatgaatttgccaaacgtctatggggcgacatgtacttccatagcaagtcgcgaaagttt
accaagaaaccgccacataactcggcccagcgcagttttgtggagttcattctggagccc
atgtataaattgattgcgcaagtggtgggcgacgtggacactacgttggcggataccttg
tcagagctgcacgtgcgcgtgtcgaaggatgagatgaaatccaacatacggccattgctg
cgcgtggtatgcaatcgcttcatgggcgattgcagtggctttgtggatatgtgcgtcgag
cacattaagtcaccgctggagaatgccaagcgtaaagtggatcacatatacacgggccca
aaggagggcgatatttaccgtgacatgatatcgtgcaaccagtacggcaccctgatggtc
cacagctctaagatgtaccccaacgacgactgcactttcttccaggtgctggcccgaatt
gtgtccggtacactgcatgctgggcaagaggtgcgcgtgctgggcgagaattatacactg
caggacgaggaagattcccggattcttcaagtcggtaggctgtgggtctacgaggcgcgc
tacaaagtggaattgaatcgtgtgccttcgggcaactgggtgctcatcgaaggcatcgac
cagtgcatagtgaagacatccagcattgtggacatcaatgtgcccgaggacctttacata
ttccggccgctcaagtttaacacccaaagcatcattaagatagctgtggagccggtgaat
ccctcagagctgccaaaaatgctggacggcttgcgtaaagtgaacaaatcgtatccgctg
ctctccacccgcgtcgaggagtcaggcgaacacgttatcttgggcactggcgagctgtac
ttggactgcgttatgcatgatctgcgcaagatgtactcggaaatcgatatcaaggtggcc
gatccagtagtggcattctgcgagaccgttgtggagaccagctcattgaagtgtttcgcc
gagacgccaaataagaagaacaagataaccatgatatcggagccgttggagaagggcctg
gccgaggacatcgagaacgagactgtctgcatcaattggaataagaagcgcatcggagag
ttctttcaggttaactatgattgggatttgctggcagcccgttcgatttgggcttttggg
ccggatagtactggacccaacattctggtggatgatacgctgccctccgaggtcgataaa
aatttactgactgcggtcaaggactccatagtgcagggctttcaatggggcacacgcgag
gggccgctctgcgaggagcccatacgcaatgtcaagttcaaaattctggatgccgtcata
gccaacgaggcactgcatcgtggtggcggccaaatcattcccacagcccgtcgtgtcgcc
tactcggctttcctcatggccacgccccgtttgatggagccgtatctgtttgtcgaggtg
caggcacctgcggattgcgtctcagcggtctacactgtcctggcgcgtcgcagaggtcac
gtaacacaagatgcgccagtctctggttctcctatttacacaatcaaagcatttataccc
gccattgactcgttcggatttgagacagatctgcgaacgcatacccagggccaggccttc
tgcctgtctgtattccatcattggcaaatcgtgccaggcgatccgctggacaagagtatt
gtcatccgcccgctggagccacagcaagcctctcatttggctcgtgagttcatgatcaag
acacgccgacgcaagggtctctccgaggatgtgtccatcaacaagttcttcgacgatccc
atgttgttggagctggcgcgacaggatgtgctactcaactacccactataa
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