Dokdonia sp. Dokd-P16: DCS32_02385
Help
Entry
DCS32_02385 CDS
T05432
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dod
Dokdonia sp. Dokd-P16
Pathway
dod00300
Lysine biosynthesis
dod00550
Peptidoglycan biosynthesis
dod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DCS32_02385
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DCS32_02385
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dod01011
]
DCS32_02385
Enzymes [BR:
dod01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DCS32_02385
Peptidoglycan biosynthesis and degradation proteins [BR:
dod01011
]
Precursor biosynthesis
Amino acid ligase
DCS32_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
AAA_15
CbiA
Motif
Other DBs
NCBI-ProteinID:
AWH73047
LinkDB
All DBs
Position
complement(530380..531843)
Genome browser
AA seq
487 aa
AA seq
DB search
MILLKDILYKVTLETVVGNTAVAITNVHFDSRKVSLNDVFVAVRGTQSDGHDYITNAVNQ
GAIAIICEELPEQIVNGITYVKVADTSSALATIASNFYGNPSANLKLIGITGTNGKTTIA
SLLYQLFQKAGYKTGLLSTVKILVDKTEYKATHTTPDSLTINKYLAEMSEAGVEYCFMEV
SSHGIHQKRTEGLRFEGGIFTNLSHDHLDYHDTFAEYRDVKKKFFDELPKTAFALVNNDD
KNGPVMVQNTKAKKVTYALKSYADYRAQILENQLSGLLLKIQDQEVWVKLIGSFNAYNLL
AIFATAELLELDQMEALKLLSELESVSGRFQYFISEGNVTAIVDYAHTPDALKNVLETIN
DIRTKNEELITVVGAGGDRDTTKRPKMGHIASALSTKAIITSDNPRSEKPEAIIEQVEAG
VEPINYKKILSITDRKQAIKTACQLANPGDIILIAGKGHETYQEIMGERFDFDDYKIVQE
TLKQLNK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgatactacttaaagacatattatataaagtaacgctagaaactgtggtgggtaatact
gctgtggcaataactaatgttcattttgactcacgtaaagtgtctcttaatgatgtattt
gttgccgtacgtggaacgcaaagtgatggtcatgattatataactaacgctgtaaatcaa
ggtgcaatagcgattatatgtgaggaacttccagagcaaattgtaaacgggataacatac
gttaaggtagcagatacttctagcgcactcgctacaatagcttctaatttttatggaaac
ccatcggctaatttaaagcttatcgggattacgggaactaatggtaagaccactatcgct
agtttgctataccaactgtttcaaaaggcaggttataaaacaggattgctttctacggta
aagattttagttgataaaaccgagtataaagcaacgcatactactccagatagtttaaca
ataaacaaatatctggctgagatgtctgaggcaggtgttgagtattgctttatggaggtg
agttcacatgggattcatcaaaagcgtacagaaggtttgcgttttgagggaggaattttt
acaaacctatctcacgatcatctagattaccacgacacctttgcagagtacagagatgtt
aagaagaaattttttgatgagttgcctaaaactgcttttgcgctagtaaataacgatgat
aaaaatggacctgttatggttcagaatacaaaagcaaaaaaagtaacctacgctttaaaa
tcatatgcagattatagagcgcaaattttagaaaaccaactgtctggattattacttaaa
attcaagatcaagaagtttgggtaaagcttattgggtcatttaatgcctataatttgcta
gccatttttgcaacggcagagcttttggaactagatcaaatggaagcattaaagctttta
agtgagttagaaagtgtgtctgggcgtttccaatactttatttcagaaggtaatgtgaca
gcaatagtagattatgcacacacgccagatgctcttaaaaatgtactagagaccataaat
gacatccgcactaaaaatgaggagcttattacggttgtaggagctggtggagatagagat
actacaaagcgtcctaagatggggcacattgcaagtgcgctgagtacgaaagctattatc
acaagtgataatccgcgctcagaaaagccagaagcaattatcgagcaagtagaagcaggt
gttgagcctattaactacaagaagattttatctatcacagatagaaagcaagctataaaa
acagcttgccaacttgcaaatccaggagatataattcttatcgcaggtaaaggtcatgag
acttaccaagagattatgggagagcgatttgattttgacgattataaaatagtacaagaa
acccttaaacaacttaataagtaa
DBGET
integrated database retrieval system
