Dipodomys ordii (Ord's kangaroo rat): 105985837
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Entry
105985837 CDS
T07834
Symbol
Smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105985837 (Smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dord03019
]
105985837 (Smg6)
03032 DNA replication proteins [BR:
dord03032
]
105985837 (Smg6)
Messenger RNA biogenesis [BR:
dord03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105985837 (Smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
105985837 (Smg6)
DNA replication proteins [BR:
dord03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
105985837 (Smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
PIN_9
Motif
Other DBs
NCBI-GeneID:
105985837
NCBI-ProteinID:
XP_012871988
UniProt:
A0A1S3F5R9
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MICQGDIARYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYY
YMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFELSPDQWRKGKKSTFRHVGD
DTTRLEIWIHPSHSRSSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAHGKLFTRIG
METFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQ
EQAAALGLAMFSLLVRRCTCLLKESAKAQLSSPEGQDDQDDIKVSSFVPDLKELLPSVKV
WSDWMLGYPDTWNPPPTSLDLPSQVAVDVWSTLADFCNILTAVNQSEVPLYKDPDDDLTL
LILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAF
KGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAK
KLALARKIAEQQRRQEKIQAVLEDQSQMRQMELEIRPLFLVPDTNGFIDHLASLARLLES
RKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFESRDSCLRAL
TSRGNELESIAFRSEDITGQLGNNDDLILSCCLHYCKDKAKDFMPTNKEEPIRLLREVVL
LTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtcaaggagatattgctaggtatcgggagcaagccaatgatacagcaaactat
gggaaagcacgcagttggtacctgaaggcccagcacattgctcccaagaatgggcgtccc
tataatcagttggctttgctggcagtgtatacgaggaggaagcttgatgctgtatattat
tatatgcgcagcttagctgccagcaaccctatcctgactgccaaggagagtctaatgagc
ttgtttgaagagaccaagcgaaaggcagaacagatggaaaagaagcaacatgaagaattt
gaactgagccctgatcagtggcggaaaggaaagaagtctactttccggcatgttggagat
gacaccactcgtctggagatctggattcatccatcccattcccggtcttcccagggcact
gagtctgggaaggattctgagcaggagaacgggcttggaagcctgagccctagtgatctg
aacaaaaggttcatcctcagttttctacatgcccatgggaagctgtttacccggattggg
atggagacattccctgcagtggccgagaaggttctcaaggagttccaggtattgctgcag
catagcccatctcctattggaagtacccgcatgctacagcttatgaccatcaacatgttt
gctgtacacaactcacagctgaaagactgcttctcagaggagtgtcgttctgtgatccag
gagcaagctgcagccctgggcctggccatgttttctctactggtacggcgctgcacctgc
ttacttaaggaatctgccaaagctcagctgtcctctcctgagggccaggatgaccaagat
gacatcaaggtgtcttccttcgtcccagacctgaaagaactgcttcccagtgtgaaagtc
tggtcagactggatgctcggctacccagacacctggaatcctccccccacttctctggat
ctaccctcacaggttgctgtggatgtgtggtcaacattggctgatttctgcaacatattg
acagcggtgaatcagtctgaagtgccactgtacaaggacccggatgatgacctcaccctt
cttatcctggaagaggatcggcttctctcgggctttgtccccttgctggctgcccctcag
gacccctgctacgtggagaaaacctcggataaggttattgcagccgactgcaaaagggtc
acagtgctgaagtattttctggaagccctttgtggacaagaagagcctctgctggcattc
aagggtggaaaatatgtgtcagtggcaccagtcccagacaccatgggaaaggaaatggga
agccaagagggaaaacaactggaagatgaggaggaggacgtggtgattgaagactttgag
gaagattcagaagctgaaggcagtgggggtgaggatgacatcagggaacttagggccaag
aagctggctctagccaggaagatagcggagcaacagcgtcgccaagagaagatccaggct
gtgctggaggaccagagtcagatgagacagatggagctggagatcagacccttgttcctc
gtacctgacaccaacggcttcattgaccacctggccagtctggcacgactgttggagagc
aggaagtacatcctggtggttcctctcattgtgatcaatgaactggacggcctggccaaa
ggacaggagacagaccaccgggcagggggctatgcccgtgtggtacaagaaaaggcccgg
aagtctattgagttcctcgagcgaagatttgagagtcgggactcttgtctacgggccctg
actagccgtggcaatgaacttgaatccatcgcctttcgcagtgaagacatcactggccag
ctgggtaacaatgatgacttgatcctttcttgctgcctccactactgcaaagacaaggct
aaggacttcatgcctaccaacaaagaagagccaatccgcctactacgggaggtggtgtta
ctgactgatgaccggaacctgcgtgtgaaggctctgacgagaaatgtgcctgtgcgggac
atcccagccttccttacgtgggcccaggtgggctga
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integrated database retrieval system
