Dipodomys ordii (Ord's kangaroo rat): 105990442
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Entry
105990442 CDS
T07834
Symbol
Tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105990442 (Tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105990442 (Tdg)
Enzymes [BR:
dord01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
105990442 (Tdg)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105990442 (Tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
105990442
NCBI-ProteinID:
XP_012878302
Ensembl:
ENSDORG00000005552
UniProt:
A0A1S3FR28
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MEAPDAGSYSLEQAQAFYSFPFQQMMAEAPTMAVMTEQQMPEVPAPAPAQDPAPEAPKGR
KRKVRTTEPKKPVEPKKPVEPKKSAESKKSGKSKKSKEKQEKITDTFKVKRKVDRFNGVS
EAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNH
MDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIY
EIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDL
RDQLKGIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGTYSENLASSEP
CSFSDGLTANGSQLQGESTFSDIPNGQWMAQSFTEQIPSFNHCGMQEQEEGSCA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccggacgcgggcagctattcccttgagcaagctcaagctttttactcattt
ccatttcaacaaatgatggctgaagctcctaccatggcagtcatgactgagcagcaaatg
ccagaagttcctgcaccagctcccgcccaggatcctgcaccagaggctccaaaaggaaga
aaaagaaaagtcaggacaacagaaccaaaaaaaccagtagaacccaaaaaacccgtggaa
cccaaaaaatctgctgagtcaaaaaaatcgggcaagtcaaaaaaatcaaaagaaaagcaa
gaaaaaatcacggacacatttaaagtgaaaagaaaagtagaccggttcaatggtgtttct
gaagctgaacttttgaccaagactcttccggatattttaactttcaatctggacattgtg
attattggcataaacccgggactaatggctgcttacaaagggcatcattatcctggacct
ggaaaccatttctggaagtgcctgtttatgtctgggctaagtgaggttcagctgaatcac
atggatgaccacaccctgccagggaagtatggcattgggtttaccaacatggtggaaagg
acaacaccaggcagcaaagatctttccagtaaagaatttcgtgaaggaggacgtattcta
gtacagaaattacagaaataccagccacgaatagcagtgtttaatggaaaatgtatttat
gaaatttttagtaaagaagtttttggagtgaaagttaagaacttggaatttgggcttcaa
ccccataagatcccagacacagaaactctgtgctatgtgatgccatcgtccagtgcacga
tgtgctcagtttccccgagctcaggacaaagtccattactacattaagctgaaggacttg
agagatcagttgaaaggaattgaacgaaacacagatgttcaggaggtgcagtatacattc
gacctacagcttgcccaagaggatgcaaagaaaatggcggtgaaggaagaaaagtacgat
ccaggctatgaagccgcgtatggaggcacctacagtgaaaacctggccagcagcgagccc
tgcagcttctcagatgggctaacagccaacgggtcacagctacaaggagaatctactttt
tctgacattcccaatgggcagtggatggctcagtcatttacagagcagatcccttccttc
aatcactgtgggatgcaggagcaggaagaaggaagctgtgcttaa
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