KEGG   Dipodomys ordii (Ord's kangaroo rat): 105992068
Entry
105992068         CDS       T07834                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03250  Viral life cycle - HIV-1
dord05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105992068
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    105992068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dord03019]
    105992068
Messenger RNA biogenesis [BR:dord03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105992068
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC1 APOBEC4 dCMP_cyt_deam_1 Toxin-deaminase N_NLPC_P60 MafB19-deam
Other DBs
NCBI-GeneID: 105992068
NCBI-ProteinID: XP_012880331
UniProt: A0A1S3FUU1
LinkDB
Position
Unknown
AA seq 400 aa
MQLQRQRPRAGLGPSCLGCLYPSTQIRNPMFTLSQGSFYFHFQNLLYANGRHTTFLCCRV
ERQQEGLIDTRVFKNQGIHAELCFLHWFHDEEFFPGEDYQLTWYMSWSPCPDCAEQVAQF
LATHRNVSLTIFIARLYYHWLPQFQQGLRRLCQEGAQVEVMSYQEFEDCYEEFVKKSFRP
WKGLYTNYKQQEITLRRILGSTVSLLKEETFLFQFNNRHRVPRHCGQYRPRRRTYLCYLL
ARPGDTTAPTKGCLQNKKGHHAEIRFIERIRSMGLDPSQDYQITCYLTWSPCLDCAFKLA
KLKKDFPRLTLRIFTSRLYFHWIRKFQKGLHQLWLSGVLVAIMGLQEFTDCWNNFVNHQQ
RSFAPWEKLDAYSKNIRERLGRILRSWGCGPTPSSGGDSR
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgcagctgcagcgccagagaccgagagccgggctgggaccctcctgcctgggatgtctg
tatccgtctacacagataagaaaccccatgttcaccttaagtcaaggatcattctacttc
catttccaaaaccttctttacgccaacggccggcatacaaccttcctatgctgtcgagtg
gaaagacaacaggaaggcctgatagacacgagggtcttcaaaaaccagggcatccatgcg
gagctctgcttcctccattggttccatgacgaggagttcttccccggagaggactaccag
ctcacctggtacatgtcgtggagcccctgccccgactgtgcggagcaggtggcccagttc
ctggcgacgcaccgcaacgtgagcctgaccatcttcatcgcccgcctctactaccactgg
ctgccccagttccagcaggggctccgccggctgtgccaggagggcgcccaggtggaggtc
atgtcctaccaagaatttgaagactgttatgaagagtttgtgaagaagtccttcaggccg
tggaaggggctgtacactaattataagcaacaggaaatcacactgaggaggattctcgga
agcacggtgagtctgttaaaagaagaaaccttcctcttccagttcaacaaccggcaccgg
gtgcccaggcactgcggccagtaccggccccgcaggaggacctacctgtgctacctgctg
gctcgccccggggacaccaccgcccccaccaaaggctgccttcaaaacaagaaaggtcac
catgcagaaatccgcttcattgagagaattcggtccatgggcctggaccccagccaagac
taccagatcacctgttacctcacatggagcccctgcctggattgtgccttcaaactggct
aagctcaaaaaagacttcccgcgcctgactctgaggatcttcacctcccgcctgtacttc
cactggatccggaagtttcagaaggggctgcatcagctgtggctgtcaggggtgctggtg
gcgatcatgggcctccaagagtttactgactgctggaacaactttgtaaaccaccagcaa
agaagcttcgccccctgggagaaactggatgcgtacagcaagaacatacgagagaggctg
ggccggatcctgaggtcttggggctgtggacctacaccatcctcaggaggggattcaagg
tga

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