Dipodomys ordii (Ord's kangaroo rat): 105992796
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Entry
105992796 CDS
T07834
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04360
Axon guidance
dord04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
105992796 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
105992796 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dord01009
]
105992796 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dord04040
]
105992796 (Trpc5)
Protein phosphatases and associated proteins [BR:
dord01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105992796 (Trpc5)
Ion channels [BR:
dord04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105992796 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
Motif
Other DBs
NCBI-GeneID:
105992796
NCBI-ProteinID:
XP_012881310
Ensembl:
ENSDORG00000012318
UniProt:
A0A1S3FY57
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPPKRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRSSSAQGKSKAESSSKRSFMG
PSFKKLGLLFSKFNGHMSEPSSEPMYTISDGLVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEVRGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaagaaggtcaattactcaccatatagagatcgcatccccctg
caaatcgtgagggctgagacggagctttctgcagaggagaaggccttcctcaatgccgta
gagaagggagactatgccactgtgaagcaggccctgcaggaggctgagatctactacaat
gtcaacatcaactgtatggatcctctgggccgaagtgccctacttattgccattgagaat
gagaacttggagatcatggagctactgctgaaccacagcgtgtatgtgggcgatgcatta
ctctatgccatccgcaaggaagtggtgggggctgtggagcttctactcagctacagaaag
cccagtggagagaagcaggtccccactctgatgatggacactcaattttcagaattcaca
ccggacatcactcccatcatgctggccgcccataccaacaattatgaaatcatcaaattg
cttgtccaaaaacgggtcactattccacggccccaccagatccgctgcaactgtgtggag
tgtgtgtccagttcagaagtggacagcctgcgtcactcccgctccagactgaacatttac
aaggctctggcaagcccctcactcattgccttatcaagtgaggaccccattctaaccgct
ttccgtctaggctgggagctcaaagagctcagcaaggtggagaatgaattcaaggctgaa
tatgaggagctctcccagcaatgcaagctttttgctaaagatctgttggaccaagctcga
agttctcgggaactggagatcatcctcaatcatcgagatgaccacagtgaagagcttgac
cctcagaaataccatgacctggccaagctgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcccaattgccaacagttacttgccaccctgtggtatgatggcttccct
ggatggcggcgtaaacactgggtagtcaaacttctgacctgcatgaccattgggttcctg
tttcctatgctatctatcgcctatctaatctcacccaggagcaaccttgggctgttcatc
aagaaaccttttatcaagttcatctgccacacagcatcctatttgaccttcctcttcatg
cttctcctggcttctcaacacatcgtcaggacagacctccatgtgcaaggacctccgcca
actgttgtagaatggatgatactgccttgggttctaggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacttgatggatttt
gcaatgaattccctctacctggcaacgatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccaactttgattgcagaggca
ctcttcgccatatccaacattttgagttccttgcgtctcatatccttgttcacagccaat
tcccacttagggcctctacagatctctttgggacgcatgctgcttgatatactcaaattc
ctctttatctactgtctggtactactggcttttgcgaatggactgaaccagctttacttt
tattatgagaccagagctatcgatgaacctaacaactgcaaagggatccggtgtgagaaa
cagaacaatgccttctccacgctttttgaaacccttcagtcactcttctggtctgtattt
ggacttttaaatctctatgtcaccaacgtgaaagccagacatgagttcactgagtttgtt
ggagctaccatgtttggaacgtacaatgtcatctccctggtagttctgttgaacatgctg
attgctatgatgaacaactcctaccagcttattgctgaccatgctgatattgaatggaag
tttgcaagaacgaagctttggatgagttattttgatgaaggtggtactttgccacctcct
tttaacatcatccccagtcccaaatcatttctctatcttggtaactggttcaacaatact
ttctgccccaaaagagatcctgacggtagacggagaaggcacaacttgagaagcttcaca
gagcgccatgctgacagcctgatacaaaatcaacattatcaggaagttatcaggaactta
gtcaaaagatatgtggctgccatgataagaaattccaaaacaaatgagggtctaacagaa
gaaaattttaaggaattaaagcaagacatctccagctttcgatatgaagtgcttgatctc
ttaggaaatagaaagcccccaaagagaagcttttccactagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttt
aatttaggctgcaaaaaaaaggcctgtcatgggccccctctcatcagaaccatgccaaga
tccagcagtgcccaaggaaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccttctttcaagaaactgggtctcttattctccaagtttaatggtcatatgtctgagccc
agttcagagccaatgtacacaatttctgatggactcgttcagcagcactatatgtggcag
gacatcagatattctcaaatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagttcggggcgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaactt
ttagactcctctgaggatgtatttgaaacttggggagaggcttgtgacttgctcatgcac
aaatggggtgacggacaggaagaacaagttacaactcggctctaa
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