Dipodomys ordii (Ord's kangaroo rat): 105993403
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Entry
105993403 CDS
T07834
Symbol
Ddx58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04064
NF-kappa B signaling pathway
dord04622
RIG-I-like receptor signaling pathway
dord04623
Cytosolic DNA-sensing pathway
dord05160
Hepatitis C
dord05161
Hepatitis B
dord05162
Measles
dord05164
Influenza A
dord05168
Herpes simplex virus 1 infection
dord05169
Epstein-Barr virus infection
dord05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
105993403 (Ddx58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
105993403 (Ddx58)
04623 Cytosolic DNA-sensing pathway
105993403 (Ddx58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
105993403 (Ddx58)
05160 Hepatitis C
105993403 (Ddx58)
05171 Coronavirus disease - COVID-19
105993403 (Ddx58)
05164 Influenza A
105993403 (Ddx58)
05162 Measles
105993403 (Ddx58)
05168 Herpes simplex virus 1 infection
105993403 (Ddx58)
05169 Epstein-Barr virus infection
105993403 (Ddx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dord04054
]
105993403 (Ddx58)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105993403 (Ddx58)
Pattern recognition receptors [BR:
dord04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
105993403 (Ddx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
VPS11_C
AAA_25
Motif
Other DBs
NCBI-GeneID:
105993403
NCBI-ProteinID:
XP_012882108
Ensembl:
ENSDORG00000027625
UniProt:
A0A1S3G1E2
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MTAEQRRNLWAFHDYVRKTLDPTYILAYMAPWLGEDQMQYIQAQKDSKGPMEAASLFLEF
LLNLKEEGWFRGFLDALFQAGYSGLYEAIETWDFQKIEKLEEHRSLLRRLQPEFKDRIIP
TDILSDMSECLISQECEEIKQICSNKGMMAGAEKMVECLIRSDKENWPKILKLALEKEEN
TFSQLWCVGEGQKDVEDDRIEASSIQIFFREDPDCLNLSQNSCPPSDMTHTNLNSPLKPR
NYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEHHLKQFPEGQKGKVAFFANQVPVYL
QQKSVFSMYFERLGYKVAGISGATAESVPVQQTIENNDIIILTPQILVNSLKQGSILSVS
VFTLMIFDECHNTSKHHPYNMIMFSYLDQKLGGPSDPLPQVVGLTASVGVGDATTVEEAM
LYICRLCAALDASVIATVRENVEELEEVVYKPQKFFRKVESRTTDKFKFIISQLIKETEC
LAKNVSEQLGHLFEIQNREIGTQKYEQWIVGVHKECMVFQMADKEEESRICKALFLYTSH
LRRYNDALIISEHAQMKDALNYLKDFFNNVRSAGFDEIEQDLTRRFEEKVPELESISLDP
SNENPKLKDLYLILQEEYHVNPETKTILFVKTRALVDALKNWIEENSALNFLKPGILTGR
GRTGEVTGMTLPAQKCVLDAFRANSNNNILIVTSVADEGIDIAQCNLIILYEYVGNVIKM
IQTRGRGRARGSKCFLLTSNADVIEKEQMNMYKEKMMNESISRLQAWDVAQFEKTVHRIQ
IDEKFSRDSQQKPKPAPVKENKKLLCGKCKGLACYTAEVRVIEDCHYTVVGNAFKERFVI
KPHPKPKTYGSFVKKAKIFCARPDCNHDWGIHVKYNAFEIPVIKIQSFVVEDVATRAQTW
FSRWKDFNYEWTQFAPAEMSI
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggagcagcggcggaacctgtgggccttccacgactacgtccggaagactctg
gaccccacctacatcctggcctacatggccccctggctgggggaggatcagatgcagtat
attcaggctcagaaagacagtaaaggcccgatggaggctgcctcactttttctcgagttc
ctgttgaacctcaaggaagaaggctggtttcgtggatttttggatgctctattccaagca
ggttattctggactttatgaagccattgaaacttgggatttccaaaaaattgaaaagtta
gaggagcatagatctcttttaagacgtttacaaccagaatttaaagacagaattattcca
acagatatcctctctgatatgtcagaatgtttaattagtcaggaatgtgaagaaattaaa
cagatatgctccaataaaggaatgatggcaggtgcagagaaaatggttgaatgccttatc
agatcagataaagaaaattggcccaagattttgaaacttgctttggagaaagaagagaac
acatttagtcaactgtggtgtgttggggaaggtcagaaagacgttgaagatgacagaata
gaagcttccagcatacagattttcttccgcgaggatccagactgcctgaatcttagtcag
aattcctgcccaccttcagacatgactcataccaacttgaacagcccattaaaaccacga
aattaccaactagagcttgctttgcctgctaagaaaggaaaaaatacaataatatgtgct
cctaccggttgtggaaaaactttcgtttcacttcttatttgtgaacatcatctcaaacaa
tttccagaaggacaaaaagggaaagttgccttttttgctaatcaggttcctgtatactta
cagcagaagtctgtgttctcaatgtattttgaaagacttgggtacaaagttgcaggcatt
tctggagcaacagctgagagcgtccctgtgcagcagacaattgagaacaatgacatcatc
attttaaccccacagatccttgtgaatagtcttaagcaaggaagcattctgtcagtgtct
gttttcactttgatgatatttgacgaatgccacaataccagtaaacaccacccgtacaac
atgatcatgttcagctacctagatcagaaacttggaggaccttcagatccactgccccag
gttgtggggctgacggcctcagtgggcgtcggggatgccacgactgtggaggaagccatg
ttgtacatctgcagactgtgtgccgctctggatgcctctgtcatcgccaccgtcagagag
aacgtggaagaactggaggaagttgtgtataaacctcagaaatttttcaggaaagtagaa
tcacggactactgacaaatttaaattcattatatctcaactgataaaggagacagagtgt
ctggcaaagaatgtctctgaacaacttggacacttatttgagatccaaaatagggaaatt
ggaacacagaaatacgaacagtggattgttggggttcataaagagtgcatggtattccag
atggcagacaaagaggaagagagcaggatttgcaaagcactcttcctgtatacttcacat
ctgcggagatataatgatgctctcattatcagtgagcatgcacaaatgaaagatgctttg
aattatctgaaagacttcttcaacaatgtccggtcagcaggatttgatgagattgagcaa
gatcttactcgaaggtttgaagaaaaggtgccagaactagaaagtatttctttggatcct
agcaatgagaaccctaaactcaaagacctctacttgatcctacaagaagaataccatgta
aatccagagacaaaaaccattctctttgtgaaaacaagagcccttgtggatgctttaaag
aactggattgaagaaaattctgctctgaactttctaaaacctggcatattgacaggacgt
ggtagaactggcgaagtaacaggaatgaccctccctgcacagaagtgtgtattggatgca
ttcagagccaacagcaataacaatattctgattgtgacctcggttgctgatgaaggcatt
gacatcgcccagtgcaatctgatcatcttgtatgagtatgtgggcaacgtcatcaaaatg
atccaaaccagaggcagaggaagagcaagaggtagcaagtgcttccttttgacaagcaat
gctgatgtaattgaaaaagaacagatgaacatgtataaggaaaaaatgatgaatgaatcc
atttctagacttcaggcatgggatgtagcacagtttgaaaaaacggttcaccggatacag
attgatgaaaaattcagcagagacagtcaacaaaaacccaaacctgctcctgttaaggag
aataagaaactgctgtgtggcaagtgcaagggtttggcatgctacacggctgaggtccga
gtgatagaggattgccattacactgtagttggaaatgccttcaaagagcgctttgtgatt
aaaccacaccccaagcccaagacctatgggagttttgtgaagaaagcaaagatattctgt
gccagaccagactgcaaccatgactggggaatacacgtgaagtataatgcatttgagatt
ccggtcatcaaaatccagagttttgttgtagaggatgttgcaaccagagctcagacatgg
ttctcaaggtggaaggactttaactatgagtggacacaatttgctcctgcagaaatgtcc
atatga
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