KEGG   Dipodomys ordii (Ord's kangaroo rat): 105999888
Entry
105999888         CDS       T07834                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04145  Phagocytosis
dord04514  Cell adhesion molecule (CAM) interaction
dord04612  Antigen processing and presentation
dord04640  Hematopoietic cell lineage
dord04658  Th1 and Th2 cell differentiation
dord04659  Th17 cell differentiation
dord04672  Intestinal immune network for IgA production
dord04940  Type I diabetes mellitus
dord05140  Leishmaniasis
dord05145  Toxoplasmosis
dord05150  Staphylococcus aureus infection
dord05152  Tuberculosis
dord05164  Influenza A
dord05166  Human T-cell leukemia virus 1 infection
dord05168  Herpes simplex virus 1 infection
dord05169  Epstein-Barr virus infection
dord05310  Asthma
dord05320  Autoimmune thyroid disease
dord05321  Inflammatory bowel disease
dord05322  Systemic lupus erythematosus
dord05323  Rheumatoid arthritis
dord05330  Allograft rejection
dord05332  Graft-versus-host disease
dord05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:dord00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    105999888
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    105999888
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    105999888
   04612 Antigen processing and presentation
    105999888
   04658 Th1 and Th2 cell differentiation
    105999888
   04659 Th17 cell differentiation
    105999888
   04672 Intestinal immune network for IgA production
    105999888
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    105999888
   05164 Influenza A
    105999888
   05168 Herpes simplex virus 1 infection
    105999888
   05169 Epstein-Barr virus infection
    105999888
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    105999888
   05152 Tuberculosis
    105999888
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    105999888
   05140 Leishmaniasis
    105999888
  09163 Immune disease
   05310 Asthma
    105999888
   05322 Systemic lupus erythematosus
    105999888
   05323 Rheumatoid arthritis
    105999888
   05320 Autoimmune thyroid disease
    105999888
   05321 Inflammatory bowel disease
    105999888
   05330 Allograft rejection
    105999888
   05332 Graft-versus-host disease
    105999888
  09166 Cardiovascular disease
   05416 Viral myocarditis
    105999888
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    105999888
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dord04147]
    105999888
Exosome [BR:dord04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105999888
  Exosomal proteins of epithelial cells
   105999888
  Exosomal proteins of breast milk
   105999888
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 Ig_2 I-set C2-set_2 GtrB_C
Other DBs
NCBI-GeneID: 105999888
NCBI-ProteinID: XP_012890497
Ensembl: ENSDORG00000005172
UniProt: A0A1S3GRC6
LinkDB
Position
Unknown
AA seq 264 aa
MITLLPVLLGLSLGCTGAEGGFVAHVESTCLLDDDGTPKDFAYCISFNKDLLACWNPEEG
IISPCEFGTLNGLAKNIANYLNQDKELLERLSNGLQDCATHTQPFWKSLTHRTRPPSVQV
AQTTPFNTREPVMLACYVWGFYPAEITITWMKNGKPIAPHQNIQKIAQPNGDWTYQTISH
LALTPSYADTYTCAVEHVGIPKPIFKDWTSGLSPIQTIKVSVSAVTLGVGIIIFSLGLIS
WQKAGSSGYIPLPGSNYPEGQHIS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgatcactctcctcccagtgctactgggcctcagcctgggctgcacaggagcagaaggt
ggctttgtggcccatgtggagagcacctgtctgttggatgatgatgggactcccaaggac
tttgcgtattgtatctccttcaacaaggacctgctggcctgctggaatccggaggagggg
ataatatccccttgtgaatttggaacactgaatggtttggccaaaaacatagcaaattac
ctcaatcaagataaagagctactcgagcgcttgagcaacgggctccaagactgtgccaca
catacccagcccttctggaagtcactgacccacagaacacgtccaccatctgtgcaagtt
gctcaaaccactccttttaacaccagggagcctgtgatgctggcctgctatgtgtggggt
ttttatccagctgaaataacaatcacatggatgaagaatggaaagcctattgcccctcac
caaaatatccagaagattgcccagcccaatggagactggacataccagaccatctcccac
ttagctttaaccccctcttatgcggacacctacacctgtgcagtggagcatgttggaatt
cccaagcccatctttaaggactggacctcgggactgtcccccatacagacaataaaggtt
tccgtgtctgcagtgaccctgggtgtgggcataatcatcttctcccttggtctcatcagc
tggcagaaggctggctcctctggctacattcctctccctggatctaattatccagaagga
caacacatttcttag

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