Oryza sativa japonica (Japanese rice) (RAPDB): Os01g0286100
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Entry
Os01g0286100 CDS
T02163
Name
(GenBank) Basic helix-loop-helix dimerisation region bHLH domain containing protein
KO
K12126
phytochrome-interacting factor 3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04075
Plant hormone signal transduction
dosa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
Os01g0286100
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
Os01g0286100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os01g0286100
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
Os01g0286100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-ProteinID:
BAF04689
RAP-DB:
Os01g0286100
UniProt:
Q0JNI9
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Position
1
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AA seq
637 aa
AA seq
DB search
MSDGNDFAELLWENGQAVVHGRKKHPQPAFPPFGFFGGTGGGGGGSSSRAQERQPGGIDA
FAKVGGGFGALGMAPAVHDFASGFGATTQDNGDDDTVPWIHYPIIDDEDAAAPAALAAAD
YGSDFFSELQAAAAAAAAAAPPTDLASLPASNHNGATNNRNAPVATTTTREPSKESHGGL
SVPTTRAEPQPQPQLAAAKLPRSSGSGGGEGVMNFSLFSRPAVLARATLESAQRTQGTDN
KASNVTASNRVESTVVQTASGPRSAPAFADQRAAAWPPQPKEMPFASTAAAPMAPAVNLH
HEMGRDRAGRTMPVHKTEARKAPEATVATSSVCSGNGAGSDELWRQQKRKCQAQAECSAS
QDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKA
SMLDEAIEYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHLQIPPMAHFPHLGMGLGYGMG
VFDMSNTGALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVPP
FASLAGLPVRPSGVPQVSGAMANMVQDQQQGIANQQQQCLNKEAIQGANPGDSQMQIIMQ
GDNENFRIPSSAQTKSSQFSDGTGKGTNARERDGAET
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggcaacgacttcgccgagctgctgtgggagaacggccaggcggtggtgcac
gggaggaagaagcacccgcagccggccttcccgccgttcggcttcttcggtggcaccggc
ggtggcggcggcggcagcagtagtagagcccaggagaggcagcccggcggcatcgatgcg
ttcgccaaggtggggggcggcttcggcgccttgggcatggctccggcggtgcacgacttc
gcttctggcttcggcgccaccacgcaggacaacggtgatgatgacaccgttccgtggatc
cattaccccataattgacgatgaagacgccgccgcccctgctgctctcgcagcagcggac
tatggctccgacttcttctccgagctccaggcggcggcggctgccgcggcggccgccgcg
ccgccgaccgatctcgcctctctgccagcctccaatcacaacggcgccaccaataacaga
aatgctccggttgccaccaccaccaccagggaaccctccaaggaaagccacggcggcctg
tcggttcccaccacccgagccgagccgcagccgcagccacagctcgccgcagccaagctg
cctcggtcgagcggcagcggcggcggcgagggcgtgatgaacttctcgctcttctcccgc
ccggccgtcctggcgagggcgacgctggagagcgcgcagaggacgcagggcaccgacaat
aaggcgtccaatgtcaccgcgagcaaccgcgtcgagtcgacggtcgtgcagacggcgagc
gggccaaggagcgcaccggcgttcgccgatcagagggcggcggcgtggccgccgcagccg
aaggagatgccgttcgcgtccacggcagccgctcccatggccccggccgttaacctgcac
cacgagatgggccgtgacagggcaggccgaaccatgcctgtccacaaaaccgaggcgagg
aaggcacctgaggccacggtcgcgacatcgtcggtgtgctccggcaacggagctgggagt
gacgagctgtggcgccagcagaagcggaagtgccaggcccaggcagagtgctcagctagc
caagacgatgatcttgacgatgaacctggagtattgagaaaatctggaaccaggagcacg
aaacgcagccgcacagctgaggttcacaatttatcagaaaggaggagaagggacaggatc
aatgaaaagatgcgcgctctgcaagaactcattcccaactgcaacaagattgataaagcc
tcgatgctggatgaagctatagagtacctcaaaacccttcagcttcaagtacagatgatg
tccatgggaactgggctgtgcattcctccaatgctattaccaacagccatgcagcacttg
caaattccaccgatggctcatttccctcatctcggcatgggattggggtacgggatgggc
gtcttcgacatgagcaacactggagcacttcagatgccacccatgcctggtgctcacttt
ccctgcccaatgatcccaggtgcgtcaccacaaggtcttgggatccctggcacaagcacc
atgccaatgtttggggttcctgggcaaacaattccttcgtcagcgtctagtgtaccacca
tttgcatctttggctggtcttcctgttaggccaagcggggtccctcaagtatcaggcgcc
atggctaacatggtgcaagaccagcaacaaggcatagcgaatcaacagcagcaatgtctg
aacaaggaagctatacagggagcaaatccaggtgattcacaaatgcagatcatcatgcag
ggtgacaacgagaattttaggataccctcttcagcccaaacaaaaagcagtcaattttca
gatggtaccggcaaggggaccaacgctagagagagagatggggctgaaacataa
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