Oryza sativa japonica (Japanese rice) (RAPDB): Os05g0139100
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Entry
Os05g0139100 CDS
T02163
Name
(GenBank) Basic helix-loop-helix dimerisation region bHLH domain containing protein
KO
K12126
phytochrome-interacting factor 3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04075
Plant hormone signal transduction
dosa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
Os05g0139100
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
Os05g0139100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os05g0139100
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
Os05g0139100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
Nucleo_P87
Motif
Other DBs
NCBI-ProteinID:
BAF16507
RAP-DB:
Os05g0139100
UniProt:
Q6AT90
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All DBs
Position
5
Genome browser
AA seq
505 aa
AA seq
DB search
MLRGNDTGSDLAELLWDNGAPAPLRPPPPPPFQPFTCSAAATTSPPAHDYLFIKNLMRGG
GAANHHHHDDDDDDDDDVPWLHYHPVVDDDDDADADTAPLPPDYCAALLSGLSDHLPPPA
AAASRVDPDPCSSSHGAVVPSTSAAAAKQARTSGGGGGGVMNFTFFSRPLQQRPSGGETA
SASASAAATSTVPVESTVVQAATNRLRSTPLFSDQRMAWLHPPKPSPRAAAPPPPPPLAP
TTRHRLDTAAATATVAQRLPPSEARAPDAPPPAATATATTSSVCSGNGDRRQLNWRDSHN
NQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQE
LIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGMFVPPMMLPAAAAAMQHHHMQMQQ
MAGPMAAAAHFPHLGAAAAMGLAGFGMPAAAQFPCPMFPAAPPMSMFAPPPPPPPFPHAA
ATAVEQTPSPPGAADAGNAPAVKQA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgctacgcgggaacgacaccggcagcgacctggccgagctgctctgggacaacggcgcc
ccggcgccgctcaggccgcctccgcctccgcccttccagcccttcacctgcagcgccgcc
gccaccacgtcgccgccggcgcacgactacctcttcatcaagaatctcatgcggggcggc
ggcgccgccaaccaccaccaccacgatgacgatgacgacgacgacgacgacgtgccgtgg
ttgcattaccaccctgtcgtggacgacgacgacgacgccgacgctgacacggcgccgctg
cctcccgactactgcgccgccttgctctccggcctctccgaccacctcccgccgcccgcc
gctgcggcgagcagggtggaccccgacccctgctcctcctcccacggcgccgtcgtcccg
tccacgtccgccgccgccgccaagcaggctcgcacgagcggcggcggcggcggcggcgtc
atgaacttcaccttcttctcgaggcctctgcagcagcgcccctccggcggcgagaccgcg
tcggcgtcggcgtcggcggcggccacctcgaccgtccccgtcgagtcgacggtggtgcag
gcggcgacgaaccggctgagaagcaccccgctcttctccgaccagaggatggcatggctg
cacccgcccaagccgtcgccacgcgccgccgcaccgccgccgccgccgcctctggcccct
accactcggcaccgactcgacaccgccgccgcgacggcgacggtggcgcagaggttgccg
ccgtccgaggcaagagctcccgacgcgcccccgcctgccgcgaccgcgacggcgacgacc
tcgtccgtctgctccggcaacggcgaccggagacagctcaattggagggacagccacaac
aaccagtccgccgagtggtcggccagtcaagacgagctggacctcgacgacgagctcgca
ggcgtccaccggaggtcggcggcgaggagctccaagcgcagccgcaccgccgaagtccac
aacctgtcagagcggaggagaagagaccggatcaacgagaagatgcgggcgctgcaagag
ctcatcccaaactgcaacaagattgacaaggcgtcgatgctggaggaagccatcgagtac
ctcaagacgctgcagctgcaggtgcagatgatgtcgatggggacggggatgttcgtgccg
ccgatgatgctgccggcggcggcggcggcaatgcagcaccaccacatgcagatgcagcag
atggccgggccaatggcggcggcggcgcatttcccccacctcggcgccgccgccgccatg
gggctcgccggcttcggcatgcccgccgccgcgcagttcccttgcccgatgttccccgcc
gcgccgccgatgtccatgttcgcgccgccgccgccgccgccgccgttccctcacgcggcc
gccaccgccgtcgagcagacgccgtctccgccgggagcagcagacgccggcaacgccccc
gccgtgaagcaggcgtga
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