KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0237900
Entry
Os06g0237900      CDS       T02163                                 
Name
(GenBank) DNA glycosylase family protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Os06g0237900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os06g0237900
Enzymes [BR:dosa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Os06g0237900
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Os06g0237900
 Prokaryotic type
     Os06g0237900
SSDB
Motif
Pfam: HhH-GPD HHH_5
Other DBs
NCBI-ProteinID: BAF19167
RAP-DB: Os06g0237900
UniProt: Q0DDA6
LinkDB
Position
6
AA seq 221 aa
MTRKPKRKPPPSPEPYHDHPSPSPAQCLAVRDALLAFHGFPDEFAPFRRRRRRLGLDTSP
DPEEDTDGDPSPPPTVLDGLVTTLLSQNTTDAISRRAFAALKAAFPTWDQVVDEEEGKRL
EDAIRCGGLAATKAARIRAMLRGVRERRGKICLEYLRDLSVDEVKTELSRFKGIGPKTVS
SISLFSCFFSEFGFRPVGFHRNVENASIDFVVKDEELIKCD
NT seq 666 nt   +upstreamnt  +downstreamnt
atgacccggaagcccaagcggaagcctccgccctcgccggagccgtaccacgaccacccc
tccccttcccccgcccaatgcctcgccgtccgcgacgccctcctcgccttccacggcttc
cccgacgagttcgcgcccttccgccgccgccgccgccgcctcggcctcgacacatccccg
gacccggaggaggacacggatggcgatccgtctccgccgcccaccgtcctcgacggcctc
gtcacgaccctcctctctcagaacaccaccgacgccatctcgcgccgcgccttcgccgcc
ctcaaggccgcgttccccacctgggaccaggtggtggatgaggaggaggggaagaggctg
gaggacgccatccggtgcggggggcttgcggcgacgaaggcggcgaggataagggcgatg
ctgaggggcgtccgggagaggcgaggcaagatttgcctcgagtatttgcgggatctgtcc
gtggatgaggtgaagactgagctatctcggttcaaagggatcgggccaaagactgtgagt
tccatctctctcttctcctgtttcttcagcgaatttggttttcgtcctgttggatttcat
cgtaatgtagagaatgctagtattgattttgttgtgaaggatgaggaattgataaaatgt
gactag

DBGET integrated database retrieval system