Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0143300
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Entry
Os08g0143300 CDS
T02163
Name
(GenBank) AMP-dependent synthetase and ligase domain containing protein
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00130
Ubiquinone and other terpenoid-quinone biosynthesis
dosa00940
Phenylpropanoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Module
dosa_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
dosa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Os08g0143300
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
Os08g0143300
Enzymes [BR:
dosa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
Os08g0143300
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BAH94104
RAP-DB:
Os08g0143300
UniProt:
Q6YYZ2
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Position
8
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AA seq
591 aa
AA seq
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MQRDAIAAARNAGCSSGRISQPPPPPFYSAATGIYSSIHPPVALPTDPSLTLVAHLFARL
PLADPGAPTLVDAATASAVSRADLRRLVASLAAGLRRRHGVRKGSVVLLLLPNSVAFPVS
FLAVLAAGAVATTMNPSSSPAEIAAQARATGACLVLASRDGAARLPPLAAPVVLVPEILD
HSAAADDGDDDQRVFAAFRAMLDGGGGDGTETAVPVVGQDDAVAILYSSGTSGRSKGVVL
THRNLIAMTELFVRFEASQYHARGARENVYMAALPMSHVYGLSLFAVGLLSIGATVVVMR
RFDAGDAVAAIGRYKVTHMPLVPPIMAAMVRAAAAGGVPPSQVASLVQVSCGAAPITAAL
IHEFLQAFPHVDFIQGYGMTESTAVGTRGFNTSKHKKYTSVGLLAPNMHAKIVHLESSSC
LPPGFSGELWLHGPGIMKGYLSDDDDACTRKDGWLRTGDIAYFDLDGYLYIVGRLKDTIK
YKGFQIAPGDLEEVLIHHPEILDVAVTSAEDEEAGEIPVAFVVRRSGSNLSCKQVMEYVA
KQVAPYKRVRKVVFVEAIPKSPAGKVLRRLLRNSHDTAAAATSSCSISSKL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgacgcgatcgccgccgcccggaacgccggctgctcgagcggccgcatctcg
cagccgccgccgccgccgttctactccgccgccaccggaatctacagcagcatccaccct
cccgtggcgctccccaccgacccctccctcaccctcgtcgcccacctcttcgcccgcctc
cccctcgccgacccgggcgcccccaccctcgtcgacgccgccaccgcgtccgcggtgtcc
cgcgccgacctccgccgcctcgtcgcctccctcgccgcggggctccgccgccgccatggc
gttcggaaggggtccgttgtgctgctgctcctcccgaactccgtcgcgttccccgtctcg
ttcctcgccgtgctcgccgccggcgccgtcgccaccaccatgaacccctccagctccccc
gccgagattgccgcccaggcgcgggccaccggcgcatgcctcgtcctcgcctcgcgcgac
ggcgccgcgaggctcccgcctctcgctgcccccgtcgtcctcgtgcccgaaatcctggac
cattccgccgcggccgacgacggcgacgacgaccaacgcgtgttcgccgcgttccgcgcc
atgctcgacggcggcggcggcgacggcaccgagacggcggtcccggtggtgggccaggac
gacgcggtggccatcctctactcgtcggggacgtcggggaggagcaagggggtggtgctg
acgcaccgcaacctgatcgccatgacggagctgttcgtccggttcgaggcgtcgcagtac
cacgcgcgaggtgctcgcgaaaatgtctacatggcggcgctgcccatgtcccacgtgtac
ggcctctccctcttcgccgtcggcctcctctcgatcggtgccacggtggtggtgatgagg
agattcgacgccggcgacgccgtcgccgccatcgggaggtacaaggtgacgcacatgccg
ctcgtgccgcccatcatggcggccatggtcagggccgccgcggccggcggcgtgccgccg
tcgcaggtggcctcgctggtgcaggtctcgtgcggcgcggctccgatcaccgccgcgctc
atccacgaattccttcaggctttcccccacgtcgacttcattcagggttatggcatgaca
gaatctactgccgtaggaactcgcggatttaacactagcaagcacaaaaagtatacctcg
gtaggccttttggcccccaacatgcacgccaagattgttcatcttgagagtagttcatgt
ttgcctccaggcttctcaggggagctatggctccatggcccaggaatcatgaaaggttac
ttgagtgatgatgatgatgcctgcacgagaaaggatggctggttgcgtaccggagacatt
gcctactttgatctggatggctacctatacattgtaggccgcttgaaggacacaatcaag
tacaaaggatttcagatagctccgggggacttggaagaagttttgatccaccaccctgaa
attcttgatgttgctgtgacatctgctgaggatgaagaagctggagagataccagtagct
tttgtggtgaggagatctggaagcaacctttcttgtaagcaagtgatggagtatgtggcc
aagcaggttgctccatataagagagtgaggaaggtggtatttgtggaggcaattcccaag
tcacctgctggaaaagttttgaggaggcttctcaggaactcgcatgacactgctgctgct
gctacctcttcttgcagtatcagctccaagctctga
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