Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0245400
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Entry
Os08g0245400 CDS
T02163
Name
(GenBank) Aminotransferase class-III family protein
KO
K19562
bifunctional dethiobiotin synthetase / spermidine---8-amino-7-oxononanoate transaminase [EC:
6.3.3.3
2.6.1.127
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00780
Biotin metabolism
dosa01100
Metabolic pathways
dosa01240
Biosynthesis of cofactors
Module
dosa_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Os08g0245400
Enzymes [BR:
dosa01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.127 spermidine---8-amino-7-oxononanoate transaminase
Os08g0245400
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.3 dethiobiotin synthase
Os08g0245400
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
AAA_26
Motif
Other DBs
NCBI-ProteinID:
BAF23268
RAP-DB:
Os08g0245400
UniProt:
Q6ZKV8
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Position
8
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AA seq
821 aa
AA seq
DB search
MLRLLRHARRHSTSSSSSAAAAAVPLTSPAFAVFGANTGVGKTLVSAGLVASLLASPSPS
PSTVAYLKPLQTGFPDDSDARFVFDRAPALLRRLRLAGGGASTRLVASNHTLFPSPAVDP
LPERQDTVVNYGGEEGVEEKALVCRTVYAWREPVSPHLAAEREGMPVEDEEVRWLVDRWL
AEEDGGGEVWKVLETAGGVASPGPSGTLQCDLYRSSRLPAVLVGDGRLGGISSTLSAYET
LLLRGYDVGSVILEDRGLSNDRFLLSYLRKRVPVHVLPPIPEDPKDDLTDWFSESSSAFS
SLKDSLQSFHSRRVQRLNSMQRKSKYLLWWPFTQHDLVPVDSVTVIDSRFGENFSAYKVK
DKTIVPQFDACASWWTQGPDSNLQIELARDMGYAAARYGHVMFPENVHEPALRCAELLLG
GVGKDWASRVYFSDNGSTAIEIALKMAFRKYACDHGIIVDSEKDIRSEGSVHFKVLALNG
SYHGDTLGAMEAQAPSAYTSFLQQPWYSGRGLFLDPPTVYIKNKSANLSLPPSIMHDQLS
SCDTCFSSLTEVFCKTRDTSSAANVYVSYISQQLSQYAMSNNSEHIAALIIEPVIQGAGG
MHLIDPLFQRLLVKECKNRKIPVIFDEVFTGFWRLGVESASELLGCFPDISCYAKLMTGG
IVPLAATLATEPIFEAFRSDSKLTALLHGHSYTAHPMGCTAAVKAIQWYKDPSTNSNIDL
DRMKLKELWDSALVNHLSSLPNVKRVVSLGTLCAIELKAEGSDAGYASLYASSLIRQLRE
EDNIYARPLGNVIYLMCGPCTTQDSCTRQLAKVHRRLQKLN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcctcctccgccacgctcgccgccactccacctcctcctcctcctccgccgcc
gccgccgccgtgcccctcacctcgccggccttcgccgtcttcggcgccaacacgggcgtc
ggcaagacgctcgtctccgcgggcctcgtcgcctcccttctcgcctccccctccccttcc
ccttccaccgtcgcctacctcaagccgctccagaccggcttccccgatgactccgacgcg
cgcttcgtcttcgaccgggcccccgcgctcctccgccgcctccgcctcgccggcggcggc
gcctccacccgcctcgtcgcgtccaaccacaccctcttcccttcccccgccgtggatccc
ctccccgagcgccaggacacggtggtgaactacggcggtgaggagggggtggaggagaag
gcgctcgtgtgcaggacggtgtacgcgtggcgggagcccgtgtcgccgcacctggcggcg
gagagggaggggatgccggtggaggacgaggaggtcaggtggctcgtggaccggtggctg
gcggaggaggacgggggtggggaggtgtggaaggtgctcgagacggccggcggcgtcgcc
agccctggcccttctggcacgctccaatgtgatctctatcggtcctctaggttacctgca
gttcttgttggagatggtcgtctaggtggtatttcatctactttatctgcctacgaaact
ctgttgctcagaggatatgatgtgggctcagttattttggaagatcgtggcttgtcgaat
gacagattcctgctctcatacttgagaaagagggtacctgtgcatgtcctgccaccaatt
cctgaggatcccaaagacgacctaactgattggttttctgagtcatcctcagcttttagt
tcacttaaagatagtctgcaatcttttcattcacgaagagttcaaaggctaaacagtatg
cagagaaaatcaaagtatttgttgtggtggcctttcactcagcatgatcttgtacctgta
gattctgttacagttattgattcgcgttttggtgagaatttctcagcatacaaggttaaa
gacaaaacgattgttccccagtttgatgcatgtgctagttggtggacacaaggacctgat
tctaacttacagattgaacttgcaagagatatgggttatgctgctgcaaggtatggtcat
gtgatgtttccagagaatgttcatgaacctgctcttcgttgtgcagaacttttgcttggt
ggtgttggtaaagattgggcttctcgagtttatttttcagacaatggatctactgcaatt
gaaattgctttgaagatggcatttcgtaaatatgcatgtgaccatgggattatagtggac
agcgaaaaagatatcagaagtgaaggaagtgttcattttaaggtccttgctttaaatggt
tcctaccacggggatactttgggtgctatggaagcacaagctccatcagcttacacatct
tttcttcagcagccatggtactcggggcgaggactttttctagatcctcctacagtgtac
attaaaaacaaaagcgccaacctttctcttcccccatcgataatgcatgatcaactgagt
tcttgtgatacatgtttttcctcattaactgaagttttttgcaagaccagggacacatcg
tctgctgctaatgtatatgtttcatacatatcacaacaactatcacagtatgctatgtca
aataattcagagcatattgcagcattaattatagagccagtaatacaaggtgcaggggga
atgcatttgatagatccccttttccagagattacttgtcaaagagtgtaaaaatcgaaaa
attcctgtcatatttgatgaggtatttacaggattttggcgtctcggtgtggagtctgct
tcagagttgcttggctgttttcctgatatctcttgttatgctaaattgatgactggtggc
attgtaccattggctgcaactttagctacagagcctatttttgaagccttcagaagtgac
tctaagctaacagcactcttgcatggccattcctataccgcgcatcccatgggctgtacc
gcagcagtaaaagctatccaatggtataaagatccctccaccaattcaaatattgatctt
gatcgtatgaagctgaaggagctatgggatagtgcactagtgaaccatttatcgtccctg
ccaaatgtgaaaagagtggtgtccttaggaactctgtgtgcaatcgagctaaaggctgag
ggatcagatgctgggtacgcatcactttatgcgagttccttaatccgacaacttcgtgag
gaggataacatctacgctcggcccctgggtaatgtgatataccttatgtgtggtccatgc
acaactcaagatagctgcactcgccagctcgccaaagtgcatcgtagacttcaaaagttg
aattga
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