Desulfosarcina ovata subsp. sediminis: DSCO28_00250
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Entry
DSCO28_00250 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00020
Citrate cycle (TCA cycle)
dov00270
Cysteine and methionine metabolism
dov00620
Pyruvate metabolism
dov00630
Glyoxylate and dicarboxylate metabolism
dov00680
Methane metabolism
dov00710
Carbon fixation by Calvin cycle
dov00720
Other carbon fixation pathways
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01120
Microbial metabolism in diverse environments
dov01200
Carbon metabolism
Module
dov_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dov_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DSCO28_00250
00620 Pyruvate metabolism
DSCO28_00250
00630 Glyoxylate and dicarboxylate metabolism
DSCO28_00250
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
DSCO28_00250
00720 Other carbon fixation pathways
DSCO28_00250
00680 Methane metabolism
DSCO28_00250
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DSCO28_00250
Enzymes [BR:
dov01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
DSCO28_00250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Motif
Other DBs
NCBI-ProteinID:
BBO79459
UniProt:
A0A5K7ZI80
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All DBs
Position
complement(27485..28810)
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AA seq
441 aa
AA seq
DB search
MINKIPDPKLASPSIERMHMTPIISDPDWHQRAQEVLAALRKRKTPLTDDFAEDITALIT
RAHRVNNFRELHERILGRLDRLCDRAQSLLLPKMVVSVTGASGGIGKETILQAAQSRMVK
KVIGLVRANSHGPATGNVMDLTDRMYLEGLDGYRANIEIRTYNDFAVESSVEEPVDVFIH
TIGQGRKPAPINPDTLEPIGKPPTREELLSRNQAVLKQVVACTHGASPKALNIFVTNPIG
LRLMQVVLDAGVNANKILGFGGELDSARFRHFIWQALEAGGHGVLDVRAQVIGEHNNNMI
PLQGSEVTFANGVTLSIERCVAEGLLSTKKVRQIMDRTIQRGIEIVESQGSSAIRSPARG
LVVMFEKLLCGKVVNGLSYRLDCNGQLCFVGGPVRLHNGLTLVPEPLEHPFTLTRSEKKE
WLKTMQANCVSSDRHHPVLNP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
ttgattaataaaattcccgatcctaagctggcatcaccttctattgaacgtatgcatatg
acacccattatcagtgatcccgactggcatcaacgcgcccaagaagtcttggctgcccta
cgcaagcgaaaaacgccgttaaccgacgattttgccgaggacataacagcgttgatcacc
cgcgcgcaccgcgtcaataattttcgggaattgcatgaacgaattctggggcggctcgat
aggctttgtgacagggcacagagcttgttgctgcccaaaatggttgtcagcgttaccggt
gcgagcggcgggattggcaaagaaaccatactgcaggcagcccagtcgcgtatggtaaag
aaagtgataggactggtgcgggccaacagtcatgggccagcgaccgggaatgtcatggat
ctgaccgatcggatgtacctcgaaggcctcgacggttaccgggccaacatcgagattcgc
acatacaacgattttgccgttgagtcgtctgttgaggaaccggtagatgttttcattcat
accatcggccagggccgcaagccggcacccatcaacccggatacattggaacccatcggt
aaacctcctacccgggaagagcttctgtcccgcaatcaagcggtgctgaagcaggtggtg
gcttgcacccatggtgcaagcccaaaagccttgaatatctttgttaccaatcccatcgga
ctccgcttgatgcaagtggttctggacgcaggggtgaacgccaacaagattttagggttc
ggtggagaattggattcggcccgcttccgccattttatctggcaagcccttgaggcggga
ggccatggcgtcctcgatgttcgtgcccaggtgatcggtgaacacaacaacaacatgatt
ccgctgcaaggcagcgaagtgacatttgccaatggcgtgactctatccatcgaacggtgc
gtggcagaaggactgctgtcgaccaagaaggtccggcagataatggatcgtaccattcag
cgggggatagagattgtcgaatcccaaggaagttccgccatacgctcacctgccagggga
ttggtcgtgatgtttgaaaaactgctgtgcggcaaagtggtcaacggcctcagctatcga
ctcgattgcaacggccagctatgttttgtcggtggtccggtacgcttgcataacggactg
acactggtgccggaacccctggagcatcccttcacgctgacaaggtctgaaaaaaaagag
tggttgaaaaccatgcaagccaattgcgtaagttccgatcggcaccatccagttctgaat
ccttga
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