Desulfosarcina ovata subsp. sediminis: DSCO28_05120
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Entry
DSCO28_05120 CDS
T06286
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov01501
beta-Lactam resistance
dov01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSCO28_05120
01503 Cationic antimicrobial peptide (CAMP) resistance
DSCO28_05120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_05120
01504 Antimicrobial resistance genes [BR:
dov01504
]
DSCO28_05120
Transporters [BR:
dov02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DSCO28_05120
Antimicrobial resistance genes [BR:
dov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSCO28_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BBO79946
UniProt:
A0A5K7ZG70
LinkDB
All DBs
Position
542298..545468
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AA seq
1056 aa
AA seq
DB search
MLSKFFLARPVFAWVIAIVMMVAGGLAIYNLPISQYPPIAPPSIAIESFYAGASAETVEN
SVTQIIEQKMTGFDDMLYLSATSDSSGASRIELTFTPGTDPDLAWAKVQNKLQLAMASLP
EAVQSQGVTVSKSTRNYLLIVGLVSEDGSMDGNDLRDYAQSNLEKVLARVPGVGEVTTFG
SQYAMRIWLDPDRLTDYRLTIQDVITALRAYNVEISAGQFGGAPAVEGQRLNASIIVQNL
LKTPDEFAAIPLRINPDGSVIRVRDVGRTELGTEQYDVQAHHNGQPAGGLAIRQSAGANA
LATARAIREKLDEMSRYFPEGMKVVYPYDTTPFVAVAIKEVFKTLFEAIILVFLVMYLFM
GNIRATLIPTIAVPVVILGTFAVLGLFGFSINMLTMFAMVLAIGLLVDDAIVVVENVERI
MSDEGLSPLDATAKSMDQITSALIGIGLVLSAVFGPMAFFPGSTGVIYRQFSITIIASML
LSVLVALILTPVLCASLLKPVPAGHEPADHAIFFMRPFFRWFDRFFFRSRTLYLKLVEHS
LRRRLRYVFVFLLIVVAMVVLFRQMPTAYLPEEDQGILFVQAMLPANSTLEQTKAVLERV
KTHFLEEQSEAVESLMTVSGYSFSGRGQNVGMAFVRLRDWELRNRPDLKVNAVAGKAMGT
FSQIKNAMVFAFPPPAVIELGQANGFDFQLLDRGGAGHASLVAARNQLLGIAGQDTRLTR
VRPNGLEDVPQYRIDVDWEKAGALGVPIAQIHRTISAAFGSAYVNDFIQAGRVKRVYIQA
DAPFRRLPGDLEKLYVRNMSGKMVPFASFASGHWTSGSPKLERFNGFPSINIWGEPVHGK
SSGEAMQAMEEAVAQLPRAFGYDWTGLSYQERMAGSQAPILYAFSILVVFLCLAALYESW
PIPISILMTLPLGVIGGVLASTMMDLPNDVYFQIGLLTILGLTTKNAILIVQFARARVDE
GMRLIDATLEGAKLRLRPIVMTSLAFGFGVLPLALASGAGAGAQQAIGIGVLGGVVTSTF
LVTLFAPLFYVIIYKLLGRHRKRERVQPAAVSPAEK
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgctatcgaaatttttcctggcccgccccgttttcgcctgggtgatcgccattgtgatg
atggttgccggcgggctggcgatttacaacctgcccatatcccaatatccgcccattgcg
ccgccctccatcgccatcgaatccttctatgcgggcgcatcggcggaaacggtggagaac
agcgtgacccagatcatcgagcagaagatgaccggtttcgacgacatgctctacctgtcg
gccaccagtgactcctccggtgcctcgcgcatcgaactgacctttacgccgggtaccgat
ccggatctggcctgggccaaggtgcaaaacaagctccaactggccatggccagcctgccc
gaggcggtacagagccagggcgtcacggtaagcaaatcgacacgcaactatcttctcatc
gtcggcttggtctccgaagacggcagcatggacggcaacgatctgcgcgactatgcccag
tccaacctggaaaaagtacttgcccgggtgccgggagtgggggaggtgaccaccttcggc
tcccaatacgccatgcggatctggctcgatccggaccgtctcaccgactaccgcctgacc
attcaggatgtgatcacggccctccgggcatacaacgtcgagatttccgccggccagttc
ggcggcgcgccggctgttgaggggcagcggctcaacgcctccatcattgtccagaacctg
ctcaagacaccggacgagttcgccgccatccccctgcggatcaatccagacggatcggtg
atccgggtccgggacgtggggcgtaccgaactgggcaccgagcagtacgacgttcaggct
caccacaacggccagcccgccggcgggttggccattcgtcagtcggccggagccaatgcc
ctggccacggccagggcgatccgggaaaaactcgacgagatgagccgctattttccggag
gggatgaaggtggtctacccttacgacaccacgccattcgtggccgtggccatcaaggag
gtgttcaagacccttttcgaggcgattatcctggtttttctggtgatgtacctgtttatg
ggcaacatccgcgcgacgctgattccaaccatcgccgtgcccgtggtgatcctgggaacc
tttgccgtgctgggccttttcggcttctccatcaacatgctgaccatgttcgccatggtt
ctggctatcggccttctggtggatgacgccatcgtggtggtggaaaacgtggagcgcatc
atgagcgatgaggggctctccccgctggacgccacggccaaatccatggaccagatcacc
agcgccctgatcggcattggcctggtgctttcggcggttttcggtccaatggcctttttt
cccggttccacgggcgtgatttaccgccagttttccatcaccatcatcgcctccatgctt
ctttcggtgctggtcgccctgattctgaccccggtgctgtgtgcctccctgctcaaaccg
gtgccggccggacacgaaccggccgaccatgccatctttttcatgcgtccgttttttcgc
tggttcgaccggttttttttccgctcacggaccctgtacctgaaactggtggagcactcc
ctgcggcggcggcttcgctacgtgtttgtgtttttgctcattgtggtggccatggtggtc
ctgttccggcagatgcccacggcctatctgcccgaagaagatcagggaatcctttttgtc
caggccatgctgccggccaactcgaccctggagcagaccaaggcggttctggaacgggtg
aaaacgcatttccttgaggaacagtccgaggcggtggagtcgttgatgaccgtgtcgggt
tacagtttttccggccggggtcagaatgtgggcatggccttcgtgcgccttagggactgg
gaactgcgcaaccgaccggacctgaaggttaacgcggtggccggaaaggccatgggtact
ttctcgcagatcaagaacgccatggtgttcgcctttccaccgccggcggtgatcgaactg
ggccaggccaacggcttcgatttccagctgctcgatcgcggtggcgccggtcatgccagt
ctggtggcggcccgcaaccagctgctgggcatcgcgggccaggacacgcggttgacccgg
gtgcggcccaatggccttgaggacgtaccccagtaccgcatcgacgtggactgggagaag
gccggagccctgggcgtgcccattgcccagatccaccgcaccatctcggcggccttcggc
agtgcctacgtcaatgacttcatccaggccggccgggtcaagcgggtttacatccaggcc
gatgcccctttccgccgcctgcccggcgatctggaaaaactttacgtgcgcaatatgtcg
ggcaagatggtcccctttgcatcattcgcttcgggtcactggacttccggttcgcccaag
ctcgagcgcttcaatggattcccgtcaatcaacatctggggcgagccggttcacggcaaa
agttccggcgaggccatgcaggccatggaggaggcggtggcccagttgccccgggccttc
ggttatgactggaccggcctctcctaccaggagcgcatggccggctcccaggctccgata
ctctacgccttttcgattctggtggtctttctctgcctggcggccctgtatgaaagctgg
cccattcccatctcgatcctgatgaccctgcccctgggcgtcatcggcggggtgctcgcc
tcgacgatgatggacctgcccaacgacgtctattttcagatcgggctgctcaccatcctg
ggattgaccaccaagaacgccattttgatcgtgcagtttgcccgggcccgggtggacgag
ggcatgaggctgatcgacgccaccctggagggggccaagctgcgcttgaggcccatcgtg
atgacgtcgctggcctttggtttcggcgtgctgcccctggccctggccagtggtgccggt
gccggtgcgcagcaggccatcggcatcggtgtgctgggcggcgtggtcacctccaccttc
ctggtgaccctgttcgccccgctgttctacgtgatcatatacaagctgctcggccggcat
cgcaagcgggaacgcgtgcagcccgccgccgtgagccctgcggagaaataa
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