Desulfosarcina ovata subsp. sediminis: DSCO28_06510
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Entry
DSCO28_06510 CDS
T06286
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00020
Citrate cycle (TCA cycle)
dov00270
Cysteine and methionine metabolism
dov00620
Pyruvate metabolism
dov00630
Glyoxylate and dicarboxylate metabolism
dov00680
Methane metabolism
dov00710
Carbon fixation by Calvin cycle
dov00720
Other carbon fixation pathways
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01120
Microbial metabolism in diverse environments
dov01200
Carbon metabolism
Module
dov_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dov_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DSCO28_06510 (mdh)
00620 Pyruvate metabolism
DSCO28_06510 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
DSCO28_06510 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
DSCO28_06510 (mdh)
00720 Other carbon fixation pathways
DSCO28_06510 (mdh)
00680 Methane metabolism
DSCO28_06510 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DSCO28_06510 (mdh)
Enzymes [BR:
dov01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
DSCO28_06510 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
DAO
NAD_binding_7
TrkA_N
F420_oxidored
NAD_binding_8
Shikimate_DH
AlaDh_PNT_C
3HCDH_N
ELFV_dehydrog
Pyr_redox_2
ApbA
ThiF
Thi4
Motif
Other DBs
NCBI-ProteinID:
BBO80085
UniProt:
A0A5K7ZIR2
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All DBs
Position
complement(715045..715977)
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AA seq
310 aa
AA seq
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MDKKVTVVGAGNVGATAAQRLAEKELCDVVLVDIVEGVPQGKSLDLMEAAPIEKHDAKVA
GSNTYEATAGSDIVIITAGIPRKPGMSRDDLISTNAGIIKSVTQQIVKHSPNAILIIVSN
PLDAMCHVAYEASGFPKNRVMGMAGVLDSARFRAFIAMELNVSIENTHAFVLGGHGDTMV
PLPRYSTVAGIPITELMSKERIDALVDRTANGGAEIVGLLKTGSAYYAPASAAVEMAESI
LKDKKKILPCAAYLQGEYGINDLYIGVPVKLGKDGIEQVIEITLTDAEKAALDKSAAAVQ
GLKEDLAKLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaagttacggttgtcggtgccggcaatgtcggtgccacggctgcccagcgg
ctggctgaaaaggaactttgtgatgtggtgctcgtcgatatcgtcgaaggggttccccaa
ggaaagtcccttgatctgatggaagccgcacccattgaaaaacacgatgccaaagtggcc
ggcagtaatacctatgaggccaccgccggttcggatattgtcattattaccgccggaatt
ccccgcaaacccggtatgagccgcgatgatctgatcagtaccaatgccggcattatcaaa
agtgtgacccagcagatcgtcaagcattcccccaacgccatcctgattatcgtcagcaac
ccgctggacgccatgtgccatgtggcctatgaagcctccggttttccgaaaaaccgtgtc
atgggcatggcgggcgtactggattcagcccgcttccgtgcgtttatcgccatggaactg
aatgtttcgattgaaaatacgcatgctttcgttttgggcggccatggcgacaccatggtt
cccctgccccgctactcgacggtggccggaattcccatcaccgaactgatgtccaaggaa
cgcattgatgccctggtcgaccgcaccgccaatggcggggccgaaatcgtagggctattg
aagacgggcagcgcctattacgccccggcatcggctgccgtggagatggctgaatccatt
ttgaaagataagaaaaaaatcctgccctgcgcggcgtatctgcagggcgagtacggcatc
aacgacctttatatcggcgttccggtcaaactgggcaaagacggaatcgaacaggtcatc
gaaatcaccctgaccgacgctgaaaaagcggcgctcgacaaatccgccgctgctgttcag
ggcctcaaagaggacctggccaaactggcatag
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