Desulfosarcina ovata subsp. sediminis: DSCO28_21610
Help
Entry
DSCO28_21610 CDS
T06286
Name
(GenBank) transporter
KO
K18138
multidrug efflux pump
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov01501
beta-Lactam resistance
dov01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSCO28_21610
01503 Cationic antimicrobial peptide (CAMP) resistance
DSCO28_21610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_21610
01504 Antimicrobial resistance genes [BR:
dov01504
]
DSCO28_21610
Transporters [BR:
dov02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DSCO28_21610
Antimicrobial resistance genes [BR:
dov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSCO28_21610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BBO81595
UniProt:
A0A5K7ZMI4
LinkDB
All DBs
Position
2349513..2352671
Genome browser
AA seq
1052 aa
AA seq
DB search
MLSRIFIQRPRLAMVVSLIITFAGLLAIFNIPVSEYPNKIVPPEIYVSATYPGANAEEVA
ASVASPLESRINGVDDMLYMSSTATNNGSYSLSIYFAVGTDPDIAQVNVLNRVQEAQSSL
PSEVTEQGISVRQRSSDMLGVVFFYYKDASRDVLPLANWVSINVSDTLKRVEGVSEASPF
GSHDYSMRIWLDPVRLTALGLTADDVISAIQEQNLLAAAGSIGTAPMPDGQQVQYTLKVK
GRLSSATEFRDIVVQTNTQGGIVRLGDVARIELGSESYASEDTLNGQPGIPLAVYQTPGS
NALQTMENVRAALKDLESRLPEGVRFDVIYDSTKFVSAAIEEIILTLLITFCLVVGVTYV
FLQDWRATLIPTLTIPVSLIGTFALLLAMGYSANTITLFALILAIGLVVDDAIVVVENVQ
RVMDDEGLDARSAAFRSMDQVTGPIIATTLVLLAVFVPVGFLPGITGQIYRQFAVTICVA
VLLSAVNALSLSPALCSLLLGKPKMARRGPLAWFNRTLNGSRNLYVAVSGWLVRKIVIAV
FILAIIGIGVWRLFGIVPTSFLPEEDKGFMIVDVQLPDGAAFARTAKLVDDLSKRIKSLD
GVDFVIGIRGYSLISGAGENAGIALVGLTPWDERTTADLQIKSVQNKIRGIAATVSGANI
NVFVPPAIQGLGMSGGFNLELQALEGQTPHEIDAVAKGLMVALNQDPAIAYAFSSYSANV
PQLAVNLDRTKARMLKVPVSRVFGVLQANLGSRYVNDINLNDRVFQVTVQADAGFRDTAD
DISRLYVRSDDNNMVPLSSLITVSTVLGPQSVTRFNQFSSASFIGAALPTVSSGQALSTV
ERIADSTLPRGYGYDWSGMSYQEKKIGNESTVVMVLALLFGYLFLVAQYESWTQPLPVII
SIVVAVLGALAGLLVSGLALSIYAQVGLVLLVGLAAKNAILIVEFAREQREAGESIYQAA
ITGARMRYRAVLMTAFSFILGVFPMIIATGAGAASRRAIGTTVFFGMLAATLIGIFLIPA
LYAGFQTMREATTRKFRNRHSANAPTSEVSHE
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgctatccagaatcttcatccagcgtccgcgcctggccatggtggtctccctgatcatc
acctttgccggactgctggccatcttcaatatcccggtgtccgaatatccgaacaaaatc
gtacccccggaaatatatgtatccgccacctaccccggtgccaatgccgaagaggtggcc
gcgtcggtggcatccccattggaatcccggatcaacggggtggacgacatgctctacatg
tcctccacggccaccaacaacggcagttattccctgtcgatctattttgccgtgggaacg
gacccggacatcgcccaggtcaacgtgctcaaccgcgttcaggaagcccagtccagcctg
cccagcgaagtcaccgagcagggaatttccgtgcgccagcgctcgtcggacatgctgggc
gtggtgttcttctactacaaggacgccagccgggatgtccttccgctggccaactgggtt
tccatcaacgtcagcgacaccctcaaacgagtggagggcgtcagcgaggccagccccttc
gggtcccacgactacagcatgcgtatctggctcgaccccgtccggctcaccgccctggga
ctcaccgccgatgacgtgatcagcgccatacaggagcagaaccttttggccgccgccggc
tccatcggtaccgcccccatgcccgacggccagcaggtccagtacaccctcaaggtcaag
gggcggctttccagtgccacggaattccgcgatatcgtggtgcagaccaacacccaggga
ggcatcgtgcgcctgggcgatgtcgcccggatcgagttgggcagcgagtcctatgcctcc
gaggatactctcaacggccagccgggtatccccctggcggtttatcagacgccgggcagc
aatgccctgcagaccatggaaaatgttcgtgcggcattgaaagacctcgaatcgcggctt
cccgaaggcgtccgctttgatgtgatttacgactccacgaagttcgtctcggccgccatc
gaagagatcatcctcaccctgctgatcaccttctgcctggtggtgggggtgacctacgtc
tttctccaggattggcgggccaccctgattccgaccctgaccattccggtatcactcatc
ggcaccttcgctctgctcctcgccatgggctactcggccaataccatcaccctcttcgcc
ctgatcctggccatcggcctggtggtggacgacgccatcgtggtggtcgaaaacgtccag
cgggtaatggatgacgaagggctcgacgcccgatcggcggctttccgttcaatggaccag
gtcaccggcccgatcatcgccaccaccctggtgctgctggccgtgttcgtgcccgtcggt
ttcctgcccggcatcaccggacagatttatcgccagtttgccgttaccatctgtgtggcc
gtactcttatcggcggtcaacgccctcagcctgagcccggccctgtgcagtcttctgctg
ggcaaaccaaaaatggcccgccgcggtcccctggcctggttcaaccggacgttgaacggc
tcccgcaacctctatgtggctgtctcgggctggctggtgcgcaaaatcgtgatcgccgtg
ttcatcctggcaatcatcggcatcggcgtatggcggcttttcggcatcgtgcccacaagc
ttcctgcccgaggaagacaagggattcatgatcgttgatgtccagctgcccgacggcgcc
gctttcgcccggaccgccaaactggtggacgacctttccaaacgcatcaaatccctcgac
ggagtcgatttcgtaatcggcatacgcggctacagcctgatcagcggtgcgggcgaaaac
gccggcatcgccctagtgggcctcaccccgtgggacgagcgcaccacggccgacctgcaa
atcaaaagcgtgcaaaacaagatccgcggcatcgcggcgacggtctccggtgccaacatc
aacgtattcgttcccccggccatccaggggctgggcatgtccggcggtttcaacctcgaa
ctgcaggccctggaaggacagacgccccatgaaatcgacgcggtggccaagggcctgatg
gtggccctcaatcaggatccggccatcgcctacgccttttcttcctattcggccaacgtg
cctcagctggccgtcaatcttgaccgtaccaaggcacgcatgctcaaggtgccggtcagc
cgggtcttcggggtcctccaggccaacctgggctcgcgctacgtcaatgacatcaacctg
aacgaccgggtcttccaggtgaccgtacaggccgatgccggcttccgggacacggccgat
gacatcagccgtttgtatgtgcgcagcgacgacaacaacatggtgcccctgtccagtctg
atcacggtctcgaccgtgctcggaccgcagtcggtcacccgcttcaatcagttttcctcg
gccagtttcatcggtgcggccctgccgacggtcagttcgggacaagccctttccaccgtc
gaacggatcgccgacagcaccctgcccagaggctacggttacgactggtcgggcatgagt
tatcaggagaaaaaaatcggcaacgagtcgaccgttgtcatggttctggccctgctattc
ggctatctttttctcgtggcccagtatgagagctggacccagccgctgccggtgattatc
tccattgtggtggccgtgctgggtgccctggccggtctgctggtcagcggactggccctt
tccatctatgcccaggtcgggctggtgctgctggtggggctggcagccaaaaacgccatt
ctcatcgtggaattcgcccgcgaacagcgcgaggccggcgagtcgatctaccaggcggcg
attaccggcgcccgcatgcgttaccgcgccgtgctgatgacggccttctcgttcatcctg
ggtgttttccccatgatcatcgccaccggcgccggtgcggccagtcggcgcgccatcgga
accacggtgtttttcggcatgctggccgccacgctgatcggaattttcctgatccccgcg
ctctacgccggtttccagaccatgcgcgaggccaccacccggaaattcagaaaccggcat
tcagccaatgcccccaccagcgaggtatcccatgagtaa
DBGET
integrated database retrieval system
