Desulfosarcina ovata subsp. sediminis: DSCO28_50930
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Entry
DSCO28_50930 CDS
T06286
Symbol
sfrB
Name
(GenBank) NADPH-Fe(3+) oxidoreductase subunit beta
KO
K15022
formate dehydrogenase (NADP+) beta subunit [EC:
1.17.1.10
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00680
Methane metabolism
dov00720
Other carbon fixation pathways
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
dov01200
Carbon metabolism
Module
dov_M00377
Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
DSCO28_50930 (sfrB)
00680 Methane metabolism
DSCO28_50930 (sfrB)
Enzymes [BR:
dov01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.10 formate dehydrogenase (NADP+)
DSCO28_50930 (sfrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
NADH_4Fe-4S
NAD_binding_8
Pyr_redox
DAO
Thi4
Pyr_redox_3
FAD_binding_2
HI0933_like
AlaDh_PNT_C
FAD_binding_3
Amino_oxidase
MurD-like_N
FAD_oxidored
NAD_binding_7
GIDA
PALP
NAD_binding_9
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BBO84527
UniProt:
A0A5K7ZW86
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Position
complement(5754246..5756135)
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AA seq
629 aa
AA seq
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MEHPVINTWTGDQASIDSCDASVRALMGWEGIVIRDPEVDPVDLLDAYLKRTAAESCGQC
IPCRLGTAQLVDLMDDIVGGRGSEKTLEQIRFLVLQISRTARCDIGRTMAKPVVDLMDNF
QADFLAVINNERPVRRGSYASVVTAPCISACPSNVDIPAYLENVRMDRWSQAMATVRADC
PMPGTIGRVCVRPCETHCRRSRLDEPLAIRAVKRFLADEEMAAKLDADTPPPPAKPGRVA
VIGAGPAGLSCAYYLGKQGYRCTIFEAQEGPGGMAAYGIPSYRLPRQVIAHEVAMVEKQG
AEIRYGIKVGEDIRLDELLGKGYGAVFLAVGAPESSKMRCEGEDAGYRCFMTGVNFLAEA
ARGRTPLSGKRLVVIGGGNVAMDCVRTARRIGFDDVNLLYRRTEAEMPADPQEIEEAKEE
GVHFHHLVAPVSIVADGEEITGLKCQRMELGEPDASGRRRPVPVQGSEFVIDCDTIIPAV
GQVCVVDCVLPEEDALTPWKTLVVDQTTFQSETSHIFGGGDCVTGPATLIKALAAGKHAA
RFIAEYLEAGQCTGKPIDILRKLITPDTVCDPQETFAYPGQTLRAHPEIMAPDVRIGSFD
EVEKGFSAAQARVEAARCLRCYRLMLSAI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggaacatccggtgatcaacacatggacgggagatcaggcgtcgatcgattcctgtgat
gccagcgtccgagcactgatggggtgggaaggcattgtgattcgggatccggaagtggat
ccggtggatctcttggatgcctatctcaagcgcacggccgccgaatcatgcggccaatgt
atcccctgccgtttgggtacggcgcaattggtcgatctgatggacgacatcgtcggtggt
cgcgggtctgaaaagaccctggaacagatccgtttcctggttctgcagatcagccgcacg
gcccgctgcgatatcggccgcaccatggccaagccggtcgttgatctgatggacaacttt
caggcggattttttggccgtcatcaacaacgaacggccggtgcgccgcggcagctacgca
tccgtggtcaccgccccctgcatcagtgcctgcccgtccaacgtggacattccggcctac
ctggaaaatgtgcgcatggatcgctggtcccaggccatggccacggtacgggccgactgc
cccatgcccggcaccatcggccgggtctgcgtgcgtccctgcgaaacccattgccgccgc
tcacgccttgacgagccgctggccatccgggccgtcaaacgcttcctggccgacgaagag
atggccgccaaactggatgcggacaccccaccaccaccggccaaaccaggccgggtggcc
gttatcggagccggtccggccggcctttcctgcgcctactatctgggcaaacagggctat
cgctgcaccattttcgaggcccaggagggtcccggcggcatggccgcctatggcatcccc
tcctatcgtctgccgcgccaggtgatcgcccatgaagtggccatggtggaaaaacaggga
gccgaaatccgttacggaatcaaggtcggcgaggatatccgcctggatgagctgttgggt
aagggctatggggccgtgtttctggccgtgggcgcgcccgagtcatccaagatgcgctgt
gagggcgaggatgccggctaccgctgtttcatgaccggggtcaatttcctggccgaggcg
gccaggggccgcacgccactgtcgggtaagcggctggtggtgatcggcggcggcaacgtg
gccatggactgcgtacgcaccgcccggcgcatcggcttcgacgatgtcaatctgctctat
cgccgtaccgaagcggagatgccggccgatccccaggagatcgaagaggccaaggaggaa
ggcgttcactttcaccatctggtggcaccggtatccatcgtggccgacggggaggagatc
accggcctcaaatgccagcgcatggaattgggagaaccggacgccagcggccggcggcgg
ccggtaccggtccagggatcggaatttgtcatcgactgcgacaccatcatcccagccgtc
ggacaggtctgcgtggtggactgcgtcctgcccgaagaagacgccctcactccctggaaa
accctggtggtggatcagaccaccttccagtccgaaaccagccacattttcggtggtggc
gactgcgtaaccggaccggccaccctgatcaaagccctggccgccggcaagcacgccgcc
cggtttattgccgagtacctcgaagcaggccaatgcacaggaaagcccattgatattttg
agaaaattgatcactcctgatacggtttgcgaccctcaggaaacctttgcctatccgggc
caaaccctcagggcccatcctgaaatcatggccccggacgtgcgcatcggcagcttcgat
gaagtggaaaaaggattttcagcagcccaggcccgagttgaggcggctcgctgtttgcga
tgttaccggctgatgctctcggccatatga
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