Desulfosarcina ovata subsp. sediminis: DSCO28_68840
Help
Entry
DSCO28_68840 CDS
T06286
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov01501
beta-Lactam resistance
dov01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSCO28_68840
01503 Cationic antimicrobial peptide (CAMP) resistance
DSCO28_68840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dov03036
]
DSCO28_68840
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_68840
01504 Antimicrobial resistance genes [BR:
dov01504
]
DSCO28_68840
Chromosome and associated proteins [BR:
dov03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DSCO28_68840
Transporters [BR:
dov02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DSCO28_68840
Antimicrobial resistance genes [BR:
dov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSCO28_68840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
PTS_EIIA_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
BBO86318
UniProt:
A0A5K8A1Q5
LinkDB
All DBs
Position
7888207..7889373
Genome browser
AA seq
388 aa
AA seq
DB search
MRKLVLPALLAFALLIFSVQCSEKIEPGTTPVDSGPAVSVRVVDVRSAVQPVLYEAVGTV
RARLSATVSSKLMGTIQAFNVKEGDDVKKGDLLVRIDDRQVAAQLDQARAALAEAKRAEA
GAVSARIAAEAGAQRARLSFERNRTMLEGGAITQEMFETVDAQHKQARASLAQAKAMVEA
ARFRVKQAQAAVEAATVARKDANVLAPFDGQVTAKQADAGALASPGMPLLTLEREGGYRV
DLVVPETHIRAVKTGLPVAVRIPAVSEIPIRGTVDVIVPSGDQGSRTFVVQVGIPVIDGL
RSGMFARVPLTIGEQKTLRIPRSAVVHEGQLTGVFIVDAGNIARFRLIRTGRDYDDSVEV
ISGIEDETRLVAQPPAQLSNGAAVEFAK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacttgttttaccggcactattggcttttgcgttgctgattttctccgttcaa
tgctcagagaagatcgaaccgggaaccactccggtcgacagtggcccggcggtttccgta
cgggtggttgacgtccgcagcgccgttcaaccggtcctttatgaagccgtcggaacggtc
agggccaggctctcggcaacggtttccagtaaattgatgggaaccatccaggcgttcaat
gtcaaggagggcgacgacgtaaaaaaaggcgatttgctggttcgcattgacgatcgtcag
gtcgccgcccagctggatcaggcccgggcggccctggcggaggccaaaagggcggaagcc
ggggcggtctcagcgcggattgccgccgaagcgggtgcccagcgcgcccggctttccttt
gagcgcaatcgcaccatgctcgaaggcggcgccatcacccaggagatgttcgaaacggtt
gatgcccagcacaagcaggcccgggcttccctggcccaggccaaggccatggtggaggcg
gcgcgtttccgggtcaaacaggcccaggcagccgtggaagccgccactgtcgcccggaag
gatgccaacgtattggctccgtttgacggccaggtgactgccaaacaggccgatgcgggg
gctttggcctctccgggcatgccgctgctgaccctggagcgcgagggtggctaccgggtc
gacctggtggttcccgagacccatattcgcgcagtgaagacagggctgccggtggccgta
cggattcccgccgtgagtgaaatccccatccgcggaacggtcgatgtgatcgttccatcg
ggtgaccagggcagccggaccttcgttgtccaggtggggattcccgtcatcgacgggctg
cgttcgggaatgtttgcccgggtgccgctgaccatcggcgagcagaagaccctgcgtatt
ccccgttcggccgtggtccatgaagggcagttgaccggggtattcatcgtcgatgccggg
aacatcgcccgctttcgcctgattcgcaccggccgcgactatgacgattccgtggaagtg
atttcgggtatcgaggacgagacccggctggtggcccagccgccggcccaattgagcaac
ggagctgccgtggagtttgcaaaatga
DBGET
integrated database retrieval system
