Dolichospermum sp. UKL201: HEP80_23875
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Entry
HEP80_23875 CDS
T10192
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
doz Dolichospermum sp. UKL201
Pathway
doz01501
beta-Lactam resistance
doz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
doz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HEP80_23875
01503 Cationic antimicrobial peptide (CAMP) resistance
HEP80_23875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
doz03036
]
HEP80_23875
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
doz02000
]
HEP80_23875
01504 Antimicrobial resistance genes [BR:
doz01504
]
HEP80_23875
Chromosome and associated proteins [BR:
doz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HEP80_23875
Transporters [BR:
doz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HEP80_23875
Antimicrobial resistance genes [BR:
doz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HEP80_23875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
BSH_CzcB
YknX_C
BSH_YknX
Biotin_lipoyl
BSH_CusB
CzcB_C
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
HH_AprE
HH_EMRA
ZnuA
Motif
Other DBs
NCBI-ProteinID:
QSV56392
LinkDB
All DBs
Position
5071426..5072730
Genome browser
AA seq
434 aa
AA seq
DB search
MSLPEPQTDIKDISPSPPKSNRWLRLVLAALLLIGGVSGIAWKLLNPEKPTPAVANAPPP
GVKVKLSPVQTGTVEDSTEYIASLESRRSVNLQPRIQGQVSQIFVKSGDLVTSGTAILQI
DSQQQQAVVSSLSAAGRGSQAQLENVRATLKSLQAERLANIADVRLNQQDYNRYSELAAQ
GAVSRQTQDLYANKLATAKAQLGAIDSRIQAQIATISQVEKSLVQADANIKQQQIQLQYY
TITAPFTGTVGDIPVKVGDVVNTSTPLATITQNRPLDVKIPVPLEKGTQLRPGLPVELIN
AQGKIIGNSSIFFISPNITNNSQSILVKALYNNDNGQLRADQLIRAKVIWNQRSGVLVPT
TAISRIAGETFVFVAETGQSPQGGSQLIAKQKQVKLGNIKGNDYQVIEGLQRDEKLIVSG
IQNLRDGLPIIPEN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacctgaacctcaaaccgatattaaagacatttctccctcacctcccaagtca
aatcggtggctgcggttggtattagccgcactgttattgattgggggtgtcagcgggata
gcatggaaattgctaaatcctgaaaaaccaactccagcagtggctaatgcgccacctcca
ggggttaaagttaaactatcaccagtgcaaacaggtacagttgaagatagtacggaatat
atagccagtttagaatcgcggcgttcagtcaatctccaaccgcgaattcaaggacaagtt
tcccaaatattcgtcaaatcaggagatttagttacctccggaactgcaattctgcaaata
gattctcaacaacaacaagccgtagttagtagtttatctgctgctggtcgaggttcacaa
gcgcaactagaaaatgttcgcgctactcttaaatctttgcaagcagaacggttggcaaat
attgcagatgtgcgtttaaaccaacaagattataatcgctattctgaattagccgcgcaa
ggggctgtatcacgtcaaactcaagatttatatgctaacaaactggcgacagcaaaagcc
caactaggggcgatagattcccgcattcaagctcaaatagctaccatatcccaggtagaa
aaatccttagtccaagctgatgccaatattaaacaacaacaaattcaactgcaatattac
acaattactgctcccttcactggaactgttggcgatattcccgttaaagtaggggatgtt
gtgaatacttccacgccattagcaactattacccaaaaccgacctttggacgttaaaatt
cctgtccctttggaaaaaggtacacaattacgcccaggattgccagtggaattaattaac
gcccaaggtaaaatcattggcaatagtagtatattctttatttctcccaatattacaaat
aactctcaatcaatattagttaaggcactttataacaatgataatgggcaactacgagcc
gatcaattaattcgggctaaggtgatctggaatcaacgttctggggtgctagttcccaca
acagcaatatctcgaatcgctggagaaacctttgtatttgtagctgaaactggacaatct
cctcaaggtggttctcaattaatagctaaacaaaaacaggtgaaactaggaaatattaaa
ggtaatgattaccaagtaatcgagggattacaacgagatgaaaaattaattgtttcagga
atacaaaatctcagagatggactaccaataattcctgaaaattag
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