Dyadobacter pollutisoli: ON006_04020
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Entry
ON006_04020 CDS
T09794
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf01501
beta-Lactam resistance
dpf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ON006_04020
01503 Cationic antimicrobial peptide (CAMP) resistance
ON006_04020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpf02000
]
ON006_04020
01504 Antimicrobial resistance genes [BR:
dpf01504
]
ON006_04020
Transporters [BR:
dpf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ON006_04020
Antimicrobial resistance genes [BR:
dpf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ON006_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF8015
DUF2997
Motif
Other DBs
NCBI-ProteinID:
WAC13128
UniProt:
A0A9E8SLJ3
LinkDB
All DBs
Position
953834..956890
Genome browser
AA seq
1018 aa
AA seq
DB search
MKITSFAVKNYQFTLIIFLLVAVVGVLTLLTMPRSEDPTTHPPQYLVTVIYPGTSPKDME
EQVVKPIENKIYGLENIDKILTTVEDGVAAIQIKFKYGVDVDNKYQEISTEINALKNSEL
PKEIYQIKTEKIASSDVKIIQVALISNTASSKTLRDHADILKTKLEKITNLREVKYTGMP
EQEIRIDMQLDKLAQLKIPMNLVVGSLQSEAADIPGGSIHMDSKVFNVKTSGKFKNAEDV
ANTVIYNANGKIVYLRDVARVSYKDGTVSHITRINGQRCILVTAAMKNDVDISQVKKEYT
PVLEEFTQALPDNIKMVKNFDQADMVSKRLGHLGFDFGLAILLVIVTLLPLGFRPSLIVM
ISIPLSLALGLIAMNLLGYSLNQLSIVGLVVALGLLVDDSIVVVENIERWLREGHSRKDA
VLKGTRQIGAAVVGCTATLVIAFLPLAFLPDMAGEFIRSLPMAIITSVLASMIVALTLVP
FIGSKILKTHEHGEGNYFLRKLQGFLTFSYRGIMPLALRWPKVTIGISLALSVLAFLLFP
LAGFKLFPTSEKPMFLINIKMPLQANIPESDRATRLVETELKKHEEIIYYTSNVGKGNPQ
IYYNVHQQDIKPDFAQIFVQLQEETSPIAKTQLIKRLRGKFSDFPYAKIEVKDFDQGTPI
EANIVVRVFGDNQDTLRTLTFKVEEILRKHPGTFFINNELNSYKSDVKIRIDKEKARTLG
VMTSDIDKVIRMAVAGLNVGDYIDDRGDARNVVITIPRDKFSNLDALRNLYVSSIQGVPI
QVDQIASIGFETSPTAINHFNKSRFAKVTSLTKDNMLANDILKDVVPELNKLKMPKGYYY
KLSGEAESEGDALGGNFLSVIILSTFLFIGVLLLQFKTFKGIIIVLSIIPLGVLGGVVFL
LMTGNPMSLVSIIGFIGLSGIQVKNSLLLVDFTNQLRAEGKSIEEAISIAGETRFLPVVL
TSITAICGLIPIAMNPNPQIAPLAIVLIGGLISSTILSRIVTPVMYKLIPPSIDSDDH
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaccagtttcgctgtcaaaaattatcagttcaccctgatcattttccttctg
gttgctgttgtcggcgtgctgacgctgctgaccatgccacgttcagaagaccccactacc
catccgccccaatatctggtcacggtaatctaccctggcacgagtcccaaggacatggaa
gaacaagtggtaaaacccatagaaaataagatttacggtctggaaaacatcgacaagatc
ctgactacggtggaagacggcgtagcggccatccagatcaagttcaaatatggtgtcgat
gtggataataagtaccaggaaatttccacggaaatcaacgcgttgaaaaacagcgagctt
cccaaggagatctaccagatcaagacggagaaaattgcgtcatcggatgtgaaaattatc
caggttgcgctcatatccaacacggcgtcatcgaaaacattgagggaccatgcggatatc
ttaaagaccaaactggaaaagatcaccaacctgcgggaagtgaaatacacagggatgcct
gagcaggaaatacggattgatatgcagctggataagctcgcccagctgaaaatacccatg
aacctggttgtcgggagcctgcaaagtgaagcggcagatattccgggggggagtatccat
atggacagcaaggtttttaatgtcaaaaccagcggcaagtttaaaaatgcagaagatgtt
gccaatacggtcatctacaacgccaacgggaaaatagtctacctcagagacgtggcaagg
gtgagctataaagacggcacggtcagccacatcaccaggatcaacgggcagcgctgtatt
ttggttacagccgccatgaaaaacgatgtagacatcagtcaggttaaaaaagagtacaca
cctgtactggaagagtttacccaggcattacctgacaacatcaaaatggtcaaaaacttt
gaccaggccgatatggtttccaagcgtctgggccaccttggctttgatttcgggctggcc
atcctgcttgtgatcgtaacgctgctgccgctgggcttccggccatcgttgatcgtgatg
atctccattccgctctcgctcgccctggggcttatcgcgatgaacttgcttggctactcg
ctcaatcagctcagtattgttggtcttgtcgtcgcattgggccttttggttgacgacagc
atcgtcgtggttgaaaacattgaaaggtggctcagggagggacattccagaaaggatgct
gtcctgaaaggcacacggcagatcggggcagccgtggttggctgcactgccacacttgtc
attgcatttttaccgttggcttttttgcctgacatggccggggagttcatccgcagtctt
ccgatggcgatcatcaccagcgtactggcatcgatgatcgtagcgctcacgctggtccct
tttatcggaagcaagatcctgaaaacccacgagcacggagagggaaattacttccttcgg
aaattgcagggctttctgaccttttcctaccgtggcatcatgcccctggccctcaggtgg
cctaaggtaacgattggtatatcgctcgcattgagcgtactggcgtttttgctgttccca
ctggcagggtttaaactcttccctacctcggaaaaacccatgtttctgatcaacattaaa
atgcccctgcaagccaacatccccgaaagtgaccgggctacaaggctagtggaaacggag
ctgaaaaagcatgaagaaatcatttattacacctccaacgtgggaaaaggcaacccgcaa
atatattataatgttcaccagcaggatatcaaaccggattttgcacagattttcgtgcag
ctccaagaggaaacaagccctattgccaagacgcagctgatcaaaagattaaggggcaag
tttagtgattttccttacgccaaaatagaggtaaaggattttgatcagggtaccccgatt
gaagccaatatcgtggtcagggttttcggcgacaaccaggacacgctgcgcacgcttacc
ttcaaagtggaagaaatactacgcaagcacccgggtacctttttcattaacaacgagctc
aattcctataagtcggatgtgaagatccgcattgacaaggaaaaagccaggacattgggc
gtaatgaccagtgacatcgataaggtgatcagaatggccgttgccggactgaatgtagga
gattacattgatgacaggggtgatgcgagaaatgtggtcatcaccatcccgcgcgacaag
ttctccaatctggatgctctcaggaacctatacgtgagcagcatccagggtgtcccaatc
caggtagatcagattgcgagcatcggctttgaaacctcgccaactgccatcaaccacttc
aacaaatcgcggtttgccaaggttacttcgctgacaaaggacaacatgctggccaatgat
attttgaaagatgttgtacctgagctcaacaaattgaaaatgcccaagggctactattac
aaattgtcgggtgaggccgaatcagaaggcgacgcgctgggcgggaatttcctttcggtc
atcattttgagcacattcctgtttattggcgtgctgctcttgcagttcaagaccttcaag
ggcatcattatcgttttatcgatcatcccgctgggcgttttgggtggggtggtgtttctg
ctgatgaccggaaatccgatgtcgcttgtttcgatcatcggtttcatcggactctcaggt
atacaggtcaaaaactcgctgctgctcgtcgactttaccaaccagctcagagccgaaggt
aaaagtatagaggaagccatcagcattgccggggaaaccaggtttttgcctgtggtactt
acatcgataacggccatttgcggtctgatcccaatcgcgatgaaccccaatccgcagatc
gccccacttgccattgtattgatcggaggattgatcagctcaacgatattatcgcggatc
gttaccccggtgatgtataagctcatcccgccaagtattgatagtgatgatcactga
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