Dyadobacter pollutisoli: ON006_13540
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Entry
ON006_13540 CDS
T09794
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf01501
beta-Lactam resistance
dpf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ON006_13540
01503 Cationic antimicrobial peptide (CAMP) resistance
ON006_13540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpf03036
]
ON006_13540
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpf02000
]
ON006_13540
01504 Antimicrobial resistance genes [BR:
dpf01504
]
ON006_13540
Chromosome and associated proteins [BR:
dpf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
ON006_13540
Transporters [BR:
dpf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ON006_13540
Antimicrobial resistance genes [BR:
dpf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ON006_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
KN17_SH3
Osteoregulin
Motif
Other DBs
NCBI-ProteinID:
WAC14960
UniProt:
A0A9E8NE00
LinkDB
All DBs
Position
3307489..3308640
Genome browser
AA seq
383 aa
AA seq
DB search
MRNLIWAALSALSIITFGCTSKGERISETKDNLLAIPVLKLNPTNTDMHREYVANIQAVR
NVEIYARVRGYLEKVYVDEGKEVKKGQVLFSVNNEEYEAQLAKAKANLQNAIADAKGAEL
ELKRVKLLVEKNVISKTEVEVAEAKVAAADAKIEEARSEKAKAAIQLGRTVIKAPFDGLI
DRIPHRMGSLISDGTLLTTISDTKSVYAYFNVSENEYLEYINTRGKDHDEKAIVELQLAD
GSFFKQKGIIETMEGAFDESTGSIAFRAKFANPQKLLKHGSTGTIRLTNTIENVILIPQK
AAFEIQDKNFVYILGKNNKIKTRSFIPQSRIAGYYVVSSGLEPGETIICEGLQGLKDGAT
IQPKPVDLGHLKLPDANSKLTVR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctaatttgggcggctctctccgccctgtctatcatcacgtttggctgtact
tcaaagggcgaacgaatcagcgagaccaaagacaatttgctcgccattcccgttttgaaa
cttaatcccaccaacacagatatgcaccgggagtatgtagcgaatatccaggccgtgcga
aacgtagagatatatgcgcgtgtgagaggttatcttgaaaaagtatacgtggatgagggc
aaagaagtaaaaaaaggccaggtcctcttcagtgtcaacaatgaagaatatgaagcccag
ctggcaaaagcaaaagccaatctgcaaaacgcgattgccgacgcaaagggcgctgaactc
gaattaaaaagggttaagttactggtagagaaaaatgtaatttctaaaactgaagtcgaa
gtggcagaagcgaaggtagccgctgcggacgccaaaattgaagaagcccgttccgaaaaa
gccaaggcagctatacagctcggccgaaccgtgatcaaagcaccttttgacggattaata
gaccggattccacacaggatgggcagcctgatcagcgacggaacgttgctcactaccatt
tcggataccaaatcggtatatgcctattttaatgtatctgaaaatgaatatctcgaatac
ataaacacaagaggaaaagatcacgatgaaaaagctattgtagagctgcaacttgcagac
ggctcctttttcaaacaaaaggggatcattgaaacgatggagggcgctttcgatgaaagc
acaggctcgattgcgttcagagcgaaatttgcgaatccgcaaaaactactcaaacatggt
tcaaccggcacgatacgtctaaccaacaccatcgagaatgtaattttgatacctcagaaa
gctgcgtttgaaattcaggataaaaattttgtgtacatccttggcaagaacaacaaaatc
aaaacgcgcagcttcataccgcaatcccgaatagcgggttactacgtcgtaagttcaggt
ttggagccgggggaaacgattatttgcgaggggctgcaaggtttgaaggacggtgcgact
attcaaccaaaaccagtggacctcggtcacctcaaactacccgacgcaaactcaaaattg
accgtgcgatag
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