Dyadobacter pollutisoli: ON006_23560
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Entry
ON006_23560 CDS
T09794
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dpf
Dyadobacter pollutisoli
Pathway
dpf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ON006_23560 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpf03400
]
ON006_23560 (nth)
Enzymes [BR:
dpf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ON006_23560 (nth)
DNA repair and recombination proteins [BR:
dpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ON006_23560 (nth)
Prokaryotic type
ON006_23560 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WAC10707
UniProt:
A0A9E8NA75
LinkDB
All DBs
Position
complement(5754664..5755326)
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AA seq
220 aa
AA seq
DB search
MQRQQRFNLFLDYFTKNFPEPETELHYSSPYELLVAVILSAQCTDKRVNIVTPPLFERFP
DPESLAASNAEEVFTYIRSISYPNNKSKHLVGMARMLTEQFNSEIPTSVEDLQKLPGVGR
KTANVIASVIFNQPAMAVDTHVFRVSRRLGLVPLTAKTPLAVEKALLRYIPKLLVHKAHH
WLILHGRYVCTARNPQCFQCPLSPFCKYFATNVKIDVFHS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacaacaacgttttaacttatttctggattattttaccaagaactttcccgag
cccgaaactgaactacattattccagtccatatgaactactagttgcagtcatactttcg
gcgcaatgcacggataagcgagtaaatatcgtcacgcccccattgttcgagcgcttcccc
gacccggaatcattggcagcatctaatgcggaggaggtttttacttacattagatcgatt
tcgtatcccaataataaaagtaagcacctggttggaatggcccggatgctgaccgagcag
ttcaattcggaaattccgacatctgtcgaagatttgcagaagctgccgggtgtaggccgc
aagacggcgaatgtgattgcgtccgttatttttaaccaacccgccatggcggttgataca
catgtctttcgggtgtccaggcggctgggattggttccattgacggccaaaacgccattg
gcagtggaaaaagcattgttgcgatatattcccaaactactggttcacaaggctcaccat
tggcttatattgcatgggcgttacgtttgcaccgccaggaacccgcaatgctttcaatgc
ccgctgtcgccattctgtaaatattttgcgacaaatgttaaaatagacgtttttcattcg
tga
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