Dolosigranulum pigrum: FNV33_03960
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Entry
FNV33_03960 CDS
T06088
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dpm
Dolosigranulum pigrum
Pathway
dpm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FNV33_03960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpm03400
]
FNV33_03960 (nth)
Enzymes [BR:
dpm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FNV33_03960 (nth)
DNA repair and recombination proteins [BR:
dpm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FNV33_03960 (nth)
Prokaryotic type
FNV33_03960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
PG_binding_4
Motif
Other DBs
NCBI-ProteinID:
QDO91249
UniProt:
A0A516GIA7
LinkDB
All DBs
Position
835480..836124
Genome browser
AA seq
214 aa
AA seq
DB search
MTDNLLTSEEATKVIQAMGQLFPEAKAELNHDSPFQLLIAVILSAQTTDVGVNKVTPGLF
EAYPTPEALMQAAREDIMEKIKTIGLYRNKAKFIKSCATDIVERFGGEVPQTRKELQSLA
GVGRKTANVVMSVAFDEPAIAVDTHVNRISKKFNIAPEDASIRQVENCLMEKLPEDLWSQ
AHHWLIFFGRYQCPARDHDHEECVRKVYDIVETM
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaatttactgaccagcgaagaagcaacgaaagtcattcaagcgatgggacag
ttattcccagaagcgaaggctgaactaaatcatgatagtccatttcaattgttaattgcg
gttatcttaagtgcacaaacaaccgatgtcggggtgaataaagtcacaccgggtttattc
gaagcataccctacaccggaagctttaatgcaggctgcccgagaagatattatggaaaaa
attaaaacaattggtctttaccggaataaagcaaaatttattaaaagttgtgcgactgat
attgttgagcgcttcggtggcgaagttccacagacccgtaaggaattgcaatcgttagcc
ggtgtcggacgtaagacagctaatgtagtaatgagtgtggctttcgatgaaccagccatc
gcagtggatacgcatgtcaatcgaattagtaagaagttcaatattgcaccggaagatgct
agtattcgtcaagttgaaaattgcttaatggaaaaactgccagaagacttatggagtcaa
gcacatcactggctgatcttcttcggacgctaccaatgtccggcccgagatcatgatcac
gaggaatgtgtccgcaaagtgtatgatatagttgaaacaatgtag
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