Dreissena polymorpha (Zebra mussel): 127857816
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Entry
127857816 CDS
T08834
Name
(RefSeq) antiviral innate immune response receptor RIG-I-like isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
dpol
Dreissena polymorpha (Zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dpol04054
]
127857816
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127857816
Pattern recognition receptors [BR:
dpol04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127857816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
DEAD
Helicase_C
ResIII
RIG-I_C
CARD_2
AAA_19
CARD
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
127857816
NCBI-ProteinID:
XP_052250448
LinkDB
All DBs
Position
14:complement(20532716..20546990)
Genome browser
AA seq
1058 aa
AA seq
DB search
MTTYDHLDEETLDSRVRLLRPAIEYCFKKSDVVTKLAQHGLLNAEETARLIEVYDQKPSQ
DASSEMFNILFKKRVPTRKWKIFVDAIKEAGYDFAVSRLISERVEIPEERERGKTLLLQF
GPFLERDINPLLLITRLLASSVIKEEDADKIENTTQTKSKAEGMRILLQRIQCYLEPHNL
WEKFLTVLWETEFEHMALLLEPEYFPTSKKLGPIDAPDVVTGPADMQEYVMEDKVDAEPD
NDLNAPPVPARSYSLGAFEDDESSFSGQDTRAMTSIADDMQALNENFKGINIKPERNKSV
DDVAHQSDEDSVDSNEWDSENGGSDFEENDDNQEGFENKEILYTREATGALTKELNKRNK
RTYEPRDYQLELAEKALCGQNTIICAETGTGKTWVALYVIDKHLSQASKSPKKVAFMART
GVLIKQQSNRFKKYLPQYNTKLITGDDEDSRMVDAFIPTNDIICFTPQILVNSLDSGNIS
SLSKFSLLVFDECHHTRGDEPYARLARKYLVEKANGQKELPQIVGLTASIGVGKSRTVEE
AVDYIIRVCASLDVRPPLSTVERCRESFKKWVNTPEEETIKMMVKNPDPCKDILLEAMED
AEKLLEEMMYFQPEMIDMLYDKRPGERDTQAYNKWTVDIEKSAQLNVNDHEISRDISACA
VYLNVYNSAIEVCNLLQIAEVAKYLSEKHHRELEGRKKHTETEKKLFDNLIDVQRKLNKL
KNDKDAANPNVQIVSEQLQKMILEKGDDSRAIVFVKARATCRALAKYLDEDLQKIGVKAS
RLYGQQTKGADEGMTEAVQTETLQKFRDGFYKVMVCTSVGTEGIDVPDCNIVINYNYSGD
EITKIQMKGRSRKKGATIIVMGDEKQLEQEMINAYKANMMYKAISELKKINARAVEHKLK
MFQTDEMQKLRYKTEYEKAKKSRRSEDDLEILCRRCNSMACLVSDVRKLGSQHFVIAKDF
PSKITTKPHKSPKKYDGIEKKGKMYCKKCPLDWGIVADRDGVDLFILKLQCFKLRNMRTG
VVSQHKKWLDVPYDVPELGLEDIPKFFRNETEENASPE
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatacgatcatctggatgaagagacactggattcgagggtgagactgttgcgg
ccagctatagaatactgctttaagaagtcggatgtggtgactaaactggcacaacatggg
cttctgaatgcagaagagactgccagattaattgaagtgtacgaccaaaagccatcacaa
gacgcatcaagtgagatgttcaatattttgttcaagaaacgtgttccgacgagaaaatgg
aaaatatttgttgacgccattaaggaagcaggatacgattttgcggtgtctcgcctgata
agcgaaagagttgaaattcccgaggaaagagaacgaggaaagacactccttttgcagttt
ggaccgttcttagagagagatataaaccctttgcttctaatcacgcgactgctagctagc
agcgttatcaaggaagaagacgcagataaaatagaaaatacaactcaaaccaagtcaaaa
gcagaaggaatgagaattttattgcagcgtatacagtgttacctggaaccacacaatttg
tgggaaaagtttctgacagtgttgtgggaaactgaattcgagcacatggcactgttattg
gaacctgaatattttcctacgtcgaagaaattagggcctattgatgcaccagacgtcgtc
accggtcctgctgatatgcaagagtatgttatggaagacaaggtagatgcagaacctgac
aatgacttaaatgctcctcctgtaccagctcgatcgtattcgttaggggcatttgaagac
gatgagtcgtcatttagtgggcaggatacaagagctatgaccagcatcgctgatgacatg
caggctctaaatgaaaattttaaaggaatcaacattaaaccggaaaggaacaaatctgta
gatgatgttgcgcatcaatcggatgaggattctgttgattcgaatgaatgggattccgaa
aatggcggaagcgacttcgaggaaaatgatgacaatcaagaaggatttgaaaacaaggaa
atcttatatacaagagaggctactggagccttgaccaaagaattaaataaacgaaataag
cggacctacgagcctcgtgattatcagctggaattagcagagaaggctctatgtggccag
aatacgatcatctgtgctgaaactgggacaggaaagacatgggtagcgttgtatgtcatc
gacaaacacctgtcacaggcgtctaaaagtcctaaaaaagttgcgttcatggctaggact
ggtgtcttaattaaacaacaatcaaaccggttcaagaagtatcttccacaatacaatacc
aagcttataacgggagatgacgaagattccagaatggtagatgcctttatccccacgaac
gacattatatgtttcacgccacaaatattggtcaacagtcttgatagtggtaacataagt
agcctttccaaattctctcttcttgtctttgacgaatgccatcacacaagaggagacgag
ccttacgcaagacttgcgagaaaatatttggtagaaaaagctaatggacaaaaggagctc
ccgcagattgttggtcttactgcctccataggcgttggtaagtccaggacggtggaagaa
gcggtcgactacattattcgtgtgtgtgcatcgctagatgttaggcctcctctgtctacc
gtagagagatgcagagagagtttcaagaaatgggtgaacacgccggaggaggaaacaatc
aagatgatggttaaaaatcctgacccttgcaaggacattttattggaagcaatggaagat
gcggaaaaacttctcgaagaaatgatgtatttccaacctgaaatgatcgacatgctgtac
gacaagcgccctggtgaaagagatacccaagcatacaacaaatggacggtggacatcgaa
aagagcgctcaactgaatgtaaatgatcatgagatatcacgtgatatcagtgcgtgcgca
gtttatttgaatgtatacaactctgcaatcgaagtatgtaatcttcttcaaatcgccgaa
gtagccaagtatctctctgaaaagcatcaccgtgaattggagggtaggaagaaacatact
gaaacggaaaagaagttgtttgacaatcttattgatgttcaaaggaagctcaataaatta
aaaaacgacaaggatgcagcaaatccgaacgtgcagatagttagcgaacagctacaaaaa
atgatactggaaaaaggcgacgattcacgtgcgattgtctttgtaaaggctagagcaaca
tgccgagcgctagctaaatatttggatgaagatcttcagaagatcggagttaaggctagt
cgattgtatggacaacaaacaaagggagcggatgaaggtatgaccgaagctgttcagacc
gagacccttcagaaattcagagacggtttttacaaggtgatggtttgtacgtctgttggt
acagaaggtattgacgtaccggactgcaacatcgttatcaactacaactactccggagac
gaaatcacaaagattcagatgaaaggtcgaagcagaaagaaaggcgcaacgattatcgta
atgggagatgaaaaacaattggaacaggaaatgatcaacgcgtataaagcaaacatgatg
tacaaagcaataagtgagttgaaaaaaattaatgcacgggctgttgaacataaattaaag
atgtttcaaaccgatgagatgcaaaagctcagatacaaaacggagtatgaaaaggcaaag
aaaagtcgaagatcggaagatgacctcgaaattctgtgtaggcgatgcaactccatggca
tgcttggtgtcagatgtgcgaaaacttggaagccaacattttgtgatagcaaaagacttt
ccatcaaagattacgacaaaaccacacaaaagcccaaagaaatacgatggcatagaaaag
aaagggaagatgtattgtaaaaagtgtccattggactggggcatagtagctgatcgcgat
ggtgtcgacttgtttattctgaaactacaatgcttcaagcttaggaacatgagaacgggt
gtcgtttcgcaacataagaaatggctagatgtcccatatgatgtaccagagttgggactg
gaagatatcccgaaattcttcaggaatgagacggaagaaaatgcatctcccgagtaa
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