Dreissena polymorpha (Zebra mussel): 127880562
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Entry
127880562 CDS
T08834
Name
(RefSeq) antiviral innate immune response receptor RIG-I-like
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
dpol
Dreissena polymorpha (Zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dpol04054
]
127880562
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127880562
Pattern recognition receptors [BR:
dpol04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127880562
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RIG-I_C-RD
ResIII
Helicase_C
CARD_2
RIG-I_C
CARD
AAA_19
Flavi_DEAD
AAA_22
SLFN-g3_helicase
SNF2-rel_dom
Yippee-Mis18
AAA_7
Motif
Other DBs
NCBI-GeneID:
127880562
NCBI-ProteinID:
XP_052283838
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All DBs
Position
5:6308958..6331323
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AA seq
1055 aa
AA seq
DB search
MTTYDHLDEGTLDSRVRMWRPAIEYCFKKSDVVTKLAQHGLLNAEETARLIELYDLKPSQ
DAASEMLNILFKKRALARKWNIFVDAIREAGYDFAVSRLINESVEIPEERERGRQLLLLF
GPHLERDINPLLLITRLLASSVIKDEDADKIKNTTQTKSKREGMRILLQRIQCYMEPHRW
WEEFLKVLWETNFEHMALLLEPEYNPSSNKLGPIDEAACITGPAAMEEHVMEDQVDAEPD
NDLNAPPVPARSYSLGAFEDNESTYTGRNTGAMTSTADDINTLNENLKELNIKPERFKFV
DDAARESDADSVESNEWDSENGGSDFDEFDEKQEGFENNETLHTREATGALTKGLNQRNK
RTYEPRDYQLELAEKALRGKNTIICAETGTGKTWVALHVIEQHLQQTSKRTRKVAFMART
GILIKQQYNRLEKFLPRHNTKLITGDDEDSRMVDAFIPTNDIICFTPQILVNNLDSGNIT
SLSKFSLLIFDECHHTRGDDPYAKLARRYLIEKSNGQKELPQIVGLTASIGVGRSRTVEE
TVDYILRVCALLDVRPPLSTVERCRESFRKWVNTPEEETIKMIVKNPDLCRDILLAAMED
AEALLEEMMVFQPDMIDMLYEKRPGERDSQAYNKWTVDIEKSAQQNVNDHQISRDISACA
VYLNVYNSAIEVSNLLQIAQVARYLAEKQRRESEGRQKHTETEKKLFEHLTEVQLKLLKL
RNDKDAANPNVLIVSEQLQKMLQEKGEDSRAIVFVKSRATCRALAEFLDNDLKKIGAKAS
PLYGQQTKGADEGMTESVQTEILKKFRDGFFKVMVCTSVGAEGIDVPDCNIVLNYNYAGD
EITKIQMKGRGRKKGAAVVVMGDDKLLEQEKVNAYKADMMYKAIGELKKVGAQDVDYKIK
MFQKEEMQKHRYKTEYEKAKKGRRAEDDLEIMCKRCNTIACLASDVRKLGSQHFVLAEEF
SSKVTITPHKSPKKYDGIEKKGKMHCKQCPLDWGIVADRNGDDLFILKLEHLKLRNMRTG
VVSRHKKWLDVPYEVQEVGLDDIPTLVAAASTSAK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatacgatcatctggatgaaggtacactggattcgcgggtgagaatgtggcgg
ccagctatagagtactgctttaagaagtcggatgtggtcactaaactagcacaacatggg
ctgttgaatgcagaagagactgccagattaattgaactgtacgacctaaagccttcccaa
gacgcagcaagtgaaatgttaaatattttgttcaagaaacgtgctctggcgagaaaatgg
aatatatttgttgatgccattagggaagcaggttacgattttgcggtgtctcgcctgata
aacgaaagtgttgaaattcctgaggagagagaacgaggaaggcaactccttttgttgttt
ggaccgcacttagaaagagatataaaccctttgcttcttataacacgactgctagctagc
agcgttatcaaggacgaagacgcagataaaataaaaaatacaactcaaacaaagtccaaa
agagaaggaatgagaattttattgcagcgcatccagtgttacatggaaccacacaggtgg
tgggaagagtttctaaaagtattgtgggaaactaactttgagcacatggcactgttattg
gaacctgaatataacccttcgtcgaataaattagggcctatagatgaagccgcatgcatc
acaggtcctgctgctatggaagaacacgttatggaagaccaggtagatgcagagcctgac
aatgacttaaatgctcctcctgtaccagctcgatcgtattcgttaggggcatttgaagac
aatgagtcgacatatacagggcggaatactggggcaatgaccagcaccgctgatgacata
aatactcttaatgagaatttaaaagaactcaacattaaaccggaaagatttaaatttgta
gatgacgctgcacgtgaatctgatgcggattctgttgaatcaaatgaatgggattccgaa
aatggcggaagcgacttcgatgaattcgatgaaaagcaagaaggatttgaaaacaatgaa
accttacatacaagagaggctactggagccttgaccaaaggattaaatcaacggaataag
cggacttacgagcctcgtgattatcagctggaattagcagagaaggctctacgtggtaaa
aatactatcatttgtgcggaaactggaacaggaaagacctgggtagcgctgcatgtgatc
gagcagcatctacagcagacttctaaaagaacaagaaaggttgcgtttatggctaggacg
ggtatcctaatcaaacaacaatacaacaggttggagaagtttcttccccgtcataatacc
aagcttataacgggagatgacgaagattcaagaatggtcgacgctttcatccccacgaac
gacatcatttgtttcacgccacaaatattggtcaacaatcttgatagtggtaacattacc
agcctttccaaattctctctccttatattcgacgaatgccatcacactcgaggggacgat
ccttacgcgaaacttgcgagaagatatttaatagaaaaaagtaatggacaaaaggagctc
ccacagattgttggccttacggcttccattggagttggtaggtctaggacggtggaagaa
actgtcgactacattctccgcgtgtgtgcattgctggatgttaggccaccgctgtctacc
gtggagagatgtagagagagtttcaggaaatgggtgaacacgccggaagaggaaaccatc
aaaatgatcgtaaaaaatcctgacctatgcagggacattttattagcagccatggaggat
gcagaagcacttctagaagaaatgatggtttttcaacccgatatgatcgacatgctgtac
gaaaagcgccctggtgaaagagatagtcaggcttataacaaatggacagtggatattgaa
aagagcgcccaacaaaatgtaaatgatcatcagatatcacgagatatcagtgcgtgcgca
gtttatttgaacgtatacaattctgcaattgaagttagtaatcttcttcaaatcgcacaa
gtagccaggtatctggctgagaagcaacggcgtgaatcggagggaaggcagaaacataca
gaaacggaaaagaagttgtttgaacatttaacggaggttcaactgaagctattaaaattg
aggaatgacaaagatgccgcaaatccaaatgtactgatagtaagcgagcagcttcaaaaa
atgttgcaagaaaaaggagaggattcacgtgcgatagtttttgtgaagtccagagcaaca
tgccgcgcgcttgcagaatttttggataatgatcttaaaaaaattggggctaaagctagt
ccattgtatggacaacaaacaaaaggagcagatgaaggtatgactgaaagtgttcagact
gaaatcttaaagaaattcagagacggattcttcaaggtaatggtatgtacctcagttggt
gcagagggtatcgacgtcccggactgtaacattgtccttaactacaattatgccggggat
gaaatcaccaagattcagatgaaagggcgcggtagaaaaaaaggggcagcagtagtcgta
atgggggatgataaactgttagaacaagaaaaggtcaacgcttacaaagcagacatgatg
tacaaagccattggagagttgaagaaagtcggtgcacaagatgtcgattataagataaag
atgtttcaaaaagaggaaatgcaaaagcacagatacaaaactgagtacgaaaaggcaaag
aaaggtcgaagagcagaggatgaccttgaaattatgtgtaagcgatgcaacaccattgca
tgtttggcgtcagatgtacgaaagcttggaagccaacattttgtgttagctgaagagttt
tcatcaaaggttacgattacgccgcacaaaagtccaaaaaaatacgatggcattgaaaag
aaagggaagatgcattgtaaacagtgccccttggactggggcatagtagctgatcgcaac
ggtgacgatttatttatcctgaaactagaacatttaaagttgcgaaacatgcgaaccggt
gtcgtttcgcgacacaaaaagtggctagatgtcccatatgaagtgcaagaggtaggactg
gacgatatccctacacttgtcgctgcagctagcacatctgctaagtaa
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