KEGG   Dryobates pubescens (Downy woodpecker): 104303697
Entry
104303697         CDS       T08526                                 
Symbol
KDM6A
Name
(RefSeq) lysine-specific demethylase 6A
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpub03036]
    104303697 (KDM6A)
Enzymes [BR:dpub01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     104303697 (KDM6A)
Chromosome and associated proteins [BR:dpub03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     104303697 (KDM6A)
   Histone demethylases
    104303697 (KDM6A)
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_17 TPR_8 TPR_2 TPR_12 TPR_16 TPR_19 TPR_7 TPR_CcmH_CycH TPR_9 TPR_11 SNAP ARM_TT21_C ANAPC3
Other DBs
NCBI-GeneID: 104303697
NCBI-ProteinID: XP_009902671
LinkDB
Position
Unknown
AA seq 1264 aa
MFKVNTDYESSLKHFQLALIDCNPCTLSNAEIQFHIAHLYEIQRKYHSAKEAYEQLLQIE
NLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYS
SIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAW
MDLGTLYESCNQPQDAIKCYLNATRSKNCSNTSALAARIKYLQAQLCNLPQGSLQNKTKL
LPSIEEAWSLPIPAELTSRQGAMNTAQQACKPHHPNTEPVLGLTQTPISQQSLPLHMIPS
SQVDDLTSPAKRKRTSSPTKNTSDVWSGGHTVSHPPVQQQIHSWCLTPQKLQHLEQLRAN
RNNLNPAQKLMLEQLESQFVLMQQHQQLRQTGVAQVRSTGIPNGPTADSSLPTNSVSGQQ
PQVALTRVPNVSQRGIRPACPGQPMANGPFPAGPVPCSTARTLSSTDTILIGNNHITESG
SNGNVPYLQQNALSLPHNRTNLTSSAEEPWKNQLSNSTQGLHKGQSSHLAGPNGERPLSS
TGPSQHLQAAGTGIQNQNGHPATPSNSVTQGAALNHLSSHTATSGGQQGITLTKESKPSG
NTSAVPETSRHSGETPNSTAGVEGLPNHVHQVMADAVSSPSHGDSKSPGLLSSDNPQLSA
LLMGKANNNVGTGTCDKVNNVHPAVHTKTENSVASSPSSAISTATPSPKSTEQTTTNSVT
SLNSPHSGHTVNGEGLEDSQSPMKADPPPISHKPSPQIIPSMSVSIYPSSAEVLKACRNL
GKNGLSNSSILLDKCPPPRPPPPPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNP
NNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPTGTKKIWRC
ESSRSHTTIAKYAQYQASSFQESLREENEKKSHHKDHSDNESTSSDNSGRRRRGPFKTIK
FGTNIDLSDDKKWKLQLHELTKLPAVXXXXXXNTVQLYMKVPGSRTPGHQENNNFCSVNI
NIGPGDCEWFVVPESYWGVMNDFCEKNNMNFLMGSWWPNLEDLYEANVPVYRFIQRPGDL
VWINAGTVHWVQAIGWCNNIAWNVGPLTACQYKLAVERYEWNKLQSVKSIVPMVHLSWNM
ARNIKVSDPKLFEMIKYCLLRTLKQCQTLREALIAAGKEIVWHGRAKDEPAHYCSICEVE
VFDLLFVTSESNSRKTYVVHCQDCARKISTNLENFVVLEQYKMEDLMQVYDQFTLAPPLP
SSSS
NT seq 3795 nt   +upstreamnt  +downstreamnt
atgttcaaagtgaacacagactatgagtctagtttaaagcattttcagttagctttgatt
gactgcaatccctgcactttgtctaatgctgaaattcagtttcacatcgctcacttatat
gaaatccagagaaagtatcactctgcaaaggaagcttatgaacagcttttgcagatcgaa
aaccttcctgcacaagtaaaagcaactgtcttacagcagttaggctggatgcatcacacc
gtggatcagcttggagacaaggcaaccaaggaaagctacgctatacagtatcttcagaaa
tctctagaagcagatccaaattctggtcaatcctggtatttccttggaaggtgctattca
agtattgggaaagttcaggatgcctttatatcttataggcaatctattgataaatcagaa
gcaagtgcagatacatggtgttctataggtgtgctgtatcaacagcaaaatcagcctatg
gatgctttacaggcctatatctgtgctgtacaattggaccatggccatgctgcagcctgg
atggacctaggcacactctatgagtcctgcaaccagcctcaggatgccattaaatgctac
ttaaatgcaactaggagcaaaaattgtagtaatacctctgcacttgcagcacggataaag
tatttacaggctcagttgtgtaaccttccacaaggtagtctacagaataaaactaaatta
cttcctagtattgaggaggcatggagcctaccaatccccgcagagcttacctccaggcag
ggtgccatgaacacagcacagcaggcttgtaaacctcatcatccaaatactgaacctgta
ctaggcctcactcaaacaccaatttcacagcaatccttgccactacacatgattccttct
agccaagtagatgacctgaccagtcctgccaagaggaaaagaacatctagtccaacaaag
aatacttcagatgtttggagcggtggccatacagtgtcacatcctcctgtacagcaacaa
attcattcttggtgcttgacaccacagaaactacagcacttggaacaacttcgtgcaaac
agaaataatctaaatccagcacagaaactcatgctggaacagctggagagtcagtttgtc
ttgatgcagcaacaccagcagctgagacaaacaggagttgcacaggtacgatctactgga
attcctaacgggccaacagctgattcatcactgcctacaaactctgtctctggtcagcag
ccgcaggttgctctaaccagagtgcctaatgtctctcagcgtggaatccgtcctgcctgc
cctgggcagcctatggctaatggaccctttccagcaggccctgttccctgcagcacagca
agaacgctgagtagtacagacactattttgataggcaataatcacataacagaaagtgga
agtaatggaaacgtgccttacctgcagcaaaacgcactctctctacctcataaccgcaca
aacctgaccagcagcgcagaggagccgtggaaaaaccaactatctaactccactcagggg
cttcacaaaggtcagagttcacatttggcaggtcctaatggtgaacgacctctctcttcc
actgggccttcccagcatctccaggcagctggcactggtattcagaatcagaatggacat
cctgccacgcctagcaattcagtaacacagggggctgctctcaatcacctctcctctcac
actgctacctcaggtggacaacaaggcattaccttaaccaaagagagcaagccttcagga
aacacatcagcagtgcctgaaacaagcaggcattctggagagacacctaacagcactgcc
ggtgtagagggacttcctaatcatgtccatcaggtgatggcagatgctgtttctagccct
agccatggagattctaagtcaccaggtttacttagttcagacaatcctcagctctctgcc
ttgttgatgggaaaagccaataacaatgtgggtactggaacctgtgacaaagtcaataac
gttcatccagctgttcatacaaagactgagaattctgttgcctcctcaccatcttcagcc
atttccacagcaacaccttctccgaaatctactgaacagactaccacaaacagtgttacc
agccttaacagccctcacagtggacatacagttaacggagaggggttggaggactctcag
agccccatgaaagcagatcctcctccaattagccacaaacctagtcctcagatcatacca
tcaatgtcggtgtccatataccccagctcagcagaagttctaaaagcatgtcggaatctg
ggtaaaaatggcttatctaacagtagtattctattggataaatgcccacctccacgacca
ccacctccaccataccctcccttgccaaaggacaagctgaatccacctacacctagtatt
tatttggaaaataaacgagatgctttctttccacctttacatcaattttgtacaaatcca
aacaaccctgttactgtaatacgtggccttgctggagcgcttaaattagacctgggactc
ttctctactaagacattggtagaagcaaataatgaacacatagtagaagtaaggacacaa
ctactgcagccagcagatgaaaactgggaccccactggaacaaagaaaatctggcgttgt
gaaagcagtagatctcatacaacaattgctaaatatgcacagtaccaggcctcctcattc
caggagtctttaagggaggaaaatgagaagaagagtcaccacaaggaccactcagataat
gaatccacgtcttctgataactctgggaggaggagaagaggaccttttaaaacaatcaag
tttgggaccaacattgacctgtcagatgacaaaaagtggaagttgcaacttcatgaactg
acaaaacttcctgctgttnnnnnnnnnnnnnnnntgaacacagtgcagttgtacatgaag
gttccaggaagcagaacaccaggtcatcaagaaaataacaatttttgttcagtcaatata
aatattggtccaggtgactgtgaatggtttgttgtccctgaaagctattggggtgtcatg
aatgacttctgtgaaaagaataatatgaatttcctaatgggatcttggtggccaaacttg
gaagatttgtatgaagctaatgtcccagtttataggttcattcaaagaccaggggatttg
gtgtggataaacgctgggactgttcattgggttcaggctattggttggtgcaacaacatt
gcgtggaatgttggccctcttacagcctgtcaatataaattggcagtggaacggtacgag
tggaataaattgcagagcgtaaagtccatagtacccatggttcatctttcatggaatatg
gctcgaaatatcaaggtctcagatccaaagctttttgaaatgataaagtactgcctgtta
agaactctcaaacagtgtcagacactgagggaagctctaattgctgcaggaaaagagatt
gtctggcatgggcgagcaaaggacgagccagctcattactgtagcatttgtgaggtggaa
gtctttgatctgctttttgtcactagtgagagcaattctcgaaagacctatgtcgtacat
tgccaagactgtgcacgaaagataagcacgaacctggaaaattttgtggtgctagaacag
tacaaaatggaggacttgatgcaagtctatgatcaatttacattagctcctccattgcca
tcctcctcatcttga

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