Dryobates pubescens (Downy woodpecker): 104305034
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Entry
104305034 CDS
T08526
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub00260
Glycine, serine and threonine metabolism
dpub00270
Cysteine and methionine metabolism
dpub00670
One carbon pool by folate
dpub01100
Metabolic pathways
dpub01230
Biosynthesis of amino acids
Module
dpub_M00035
Methionine degradation
dpub_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104305034
00270 Cysteine and methionine metabolism
104305034
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104305034
Enzymes [BR:
dpub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
104305034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Poxvirus_B22R_C
Motif
Other DBs
NCBI-GeneID:
104305034
NCBI-ProteinID:
XP_009904150
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MLVLLLGMLLQGREGTVEARHVFRLSRATASSSAGTESHMVAVVREDGDPRGEPADPDPC
CGSQRKGNSPAAFHAPLSFQLLDFEKSLPLQVELTKTCLLSDSSCRGSQESEADSTWILP
NLPSQCTWTAATPAAMSPHSCIALPKETKILPNILRKIGSTPLVRINKIGKSYGLKCELL
AKCEYFNAGGSVKDRIGLRMVEDAEKAGIIKPGDTLIEPTSGNTGIGLALVAAVKGYRCI
IVLPENMSKEKVDILRALGAEIVKTPCGRFDAPDSNIRVAWKLKSEIPNSHILDQYRNPS
NPLAHYDTTAEEILEQCEGKVDMVVIGSGTGGTVTGIGRKLKEKCPECKIVGVDPDGSIV
ALPSELNGTNTTTSEVEGIGHDFIPTVLDRSVIDQWYKCNDRDSFLMSRRLIREEGLLCG
GSSGSAMSAAVRAARDLKEGQRCVVILPDSVRNYMSKFVNDKWMIKNDFLDDIQEHKPWW
WNIKVQKLNLSAPFILLPEVSCQKAIEILQEKGYDQAPVVSESGVILGMVTLSNTLTSVL
AGNAQFSDPVTKVIYNQYSKIGLENSLGKLSCILEDDHFAVVVQEQTQFNGNGSSLRKEV
VVGVVTAMDLLTFVSRDDKRERSSLAASTSAPPAGPAATPTPEPPGQESF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgttgctgctgggaatgctcctgcaaggtcgagaaggaaccgtggaggcgagg
cacgtgttccgtctgtcccgagccaccgcttcctccagcgccggcaccgagagtcacatg
gtggcagtagtgagggaggatggagacccaaggggagagcctgcggaccctgacccgtgc
tgtggcagccaaaggaaaggcaactcacccgctgccttccatgcacccctctccttccag
ctcttggactttgaaaagtcactgcctctccaggtggagctgaccaagacatgcctgctc
tcagacagcagctgcaggggaagtcaggaaagcgaagctgacagcacgtggattcttccc
aacttgcccagtcagtgcacgtggactgctgcaacgccagctgccatgtctccacactcc
tgcatagccttgccaaaagaaacaaagatcttgcccaacatcctgaggaaaattggctcc
accccactagtccgaatcaacaagattgggaagtcctatgggctcaagtgtgagctcttg
gcaaaatgtgagtacttcaatgcagggggcagtgtgaaggaccgcatcggcctgaggatg
gtggaagatgcagagaaagctgggattataaaaccaggagacacgctgattgaacctact
tcaggaaacacaggaatcggactggcactggtagctgcagtgaaaggttaccgctgcatc
atcgtcttaccggagaacatgagcaaggagaaggttgacattctgagggcactgggtgct
gaaattgtgaagaccccctgcggccgcttcgatgccccagactctaacattcgtgttgcc
tggaagctgaagagtgaaatcccaaactcccacatcctggaccagtaccgaaatccaagc
aaccccctggctcattacgacaccacagctgaggagatcctggagcaatgtgaaggcaaa
gtcgacatggtggtgattgggtctggcacaggaggcactgttactggcattggaaggaag
ctgaaggagaagtgcccagagtgcaagatcgttggtgtagatcctgatggatccatcgtc
gccctgcccagtgagctgaatggaacaaacaccacaaccagtgaggtggagggcattggg
catgactttatccctactgtccttgatagatcagtgattgatcagtggtacaagtgcaac
gacagagattcatttctcatgtctcgcaggctgatcagagaggaaggattgctgtgtggt
ggcagctcaggcagtgccatgtctgctgctgtgcgagctgcccgggacctgaaggagggc
cagcgctgtgttgttatcctgcctgactctgtcagaaactacatgtccaaatttgtgaat
gacaagtggatgataaaaaatgatttcctagatgacatccaggagcacaaaccttggtgg
tggaacatcaaggtgcagaaactgaatctctcagcccctttcattctccttccagaagtc
agctgtcagaaggcaattgagatccttcaggagaagggatatgaccaagctcctgtagtt
tctgaatcaggagttattctgggtatggtgaccctcagcaataccctcacttcagttctg
gctggaaacgcacagttctcagaccctgttacgaaggtcatctacaaccagtactcaaag
attggcctggagaacagccttgggaagctttcctgcatcctggaggatgatcatttcgct
gttgttgttcaggagcaaacacagttcaatggaaatggcagttccctcaggaaggaggtg
gtggttggtgtggtgacagcaatggacctcctcacctttgtcagtagagatgacaagagg
gagcgcagcagcttggctgcatccacctctgctcccccagcagggccagctgcaaccccc
acgcctgaaccacctggccaagagtctttctag
DBGET
integrated database retrieval system