Dryobates pubescens (Downy woodpecker): 104306645
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Entry
104306645 CDS
T08526
Symbol
RNF123
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpub04121
]
104306645 (RNF123)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104306645 (RNF123)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104306645 (RNF123)
Multi subunit type E3
KPC complex
104306645 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104306645
NCBI-ProteinID:
XP_009905933
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLSTEPEKSKVTGIVNSRLLNDYLHRVFTSADGNQPAAAYRKHLT
FQNLQEHLDRLLAEENGSEDGRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKARKLLGYLKNVIHIGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPATLSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANVLIDPAELQAVTMDDLDEDEESATSAAQSQRPSA
ALAIGGALARPGWLSSPTLGRANRFLSTAAVSLMNPRRPLGGLEKIKVRTLSVEQRTEED
IEGSHGNEGLLLGRPPEEPDQPITENSLLEILDGIVMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIY
WLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMADLL
RSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTVTLAPEIFLDWSRPSSELLLRRLAQLLNQVXXXXXXVTAERNLFDRVVNLR
LPGLESVDHYPILVAVTGILVRLLVDTDVQGAERATAVLLADPCFQLRSIQYLLGHAEPS
ALAAAAPAADKRHFSLHTYTEYISVEELAKVEKMLSHLSEESKQAAATTLPTSEEDLCPI
CYAHPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagaggtgctgggactgctttctcgaggaagaactacaggctgagcactgag
ccagagaagtccaaggtcacagggattgtgaacagcagactgctgaatgattacctgcat
cgtgtctttaccagcgctgatgggaaccagcctgcagctgcttacaggaagcatctgacg
ttccagaacctgcaagagcacctcgaccggttgctggcagaggagaatggctctgaagat
ggtcgagatcaggtagcagagggtcgccttggcccctctactgtggtgctggaccataca
agtggttttgaggggctcctgctggttgatgatgacttacttggggtgattggccacagt
aactttgggtccatcagggccacaacatgtgtgtacaaagggaaatggatttatgaggtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcaggtttaat
caggaggaaggagttggagacacaccggattcatatgcgtatgatggcaacagggtgcgc
aagtggaacgtgactactaccaactatggcaaatcctgggcagcaggagacattgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaatggcatatctctggga
acagcttttgataacatcaccaggggtgctggaatggcttattttcctgccatcagcctc
tccttcaaagagtctgttgctttcaactttggaagccgaccgctccgttatccagtggaa
ggttaccgccccctgcaagatcctccagttgcagacctcgtgaaggctcgcaagctgctg
ggctacttgaagaatgtgatccacatcgggatagatgtgacggaggggaagctggtggag
aaggacacatccatgtggcagctgcaaggagaacccacggtgctgattacattagctcac
atcttcaactatttctcccctcttatgtgcaaggtgtacctggtggaagatgtgctcatg
accttcctgttgagcatccttgagcgtggaggggctgtggaggcccacccccttattcag
cagctactggatctcatgtggcttcttatggaggagtatgaagtacatgagtgcctcaag
cagctactgatgtccctgctgcgggcttacaggttctctcccatcatcccagacctggga
ttgcagattcactacctccggctcaccattgcagtcctgaagcatgagaaatccaggaag
tacctactcagcaatgttctcttcgatgtgcttcgttcagttgtgttcttctacatcaag
agccctctgcgtgtggaggaggctggtttgcaggagctcattcccaccacgtggtggccg
aaccgcttcaccaaagagggcaaggagagtaaggaggtgaaggaggagagtgctgaggag
agactgaggcgacgagcgtatgaaagaggctgccagcggctcaagaaacgcatcgaagtg
gtggaaggtctccaggttcagattctgaagctgttgctgaacaacaaagacagaggaggg
ggagaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaggaaaacgct
agcaatagagggaacttgactgtgttgtgcccaccagagtacatggtgtgcttcctgcac
cggcttatcgctgccctgcgtttcttctgggatggccacaaggcaaagacccctgccaca
ctgagcagtgaagaggcatatgtccctcctcaactcttctataatgggaaggtggattat
tttgaccttcagcgacttggaggtctcctgtctcatcttaagaagactttgaaagatgac
ctggctgcaaaagccaatgtcctgatcgaccctgcggagctgcaggcagtgactatggat
gatctcgatgaagatgaggaatcggcaacatcagcagcacagtctcagcgtccctctgct
gccctggccattggtggagctcttgccaggcctggctggctcagctcccccaccctgggc
cgtgccaaccgcttcctcagcacggcggcggtcagcctgatgaacccccggcggccgctg
ggcggcctggagaagatcaaagtgcgcacgctgagcgtggagcagcggacagaggaggac
attgaaggcagccatggaaatgagggtctcttactgggcagacccccagaggagccagac
cagcccatcacagagaattcccttctggaaatcctggatgggatagtgatgatgtacaac
ctcagtgtccaccagcaacttgggaagatggttggcgtgtcagatgatgtgaatgaatat
gccatggcactgaaagacacagaggaaaaaatcagccgctgcccaaagaggaggagagat
atccatgaggaactgctgaagagccaaaaggtcttctctgagaagctgaaccacctaagc
cgccgcctcgcttggataaacgtcaccatttattcaaaggagaagatgcaggacatatat
tggctgctgcgagtgtgcatccgcaccatcgagcatggcgacaggacaggctccctcttc
gctttcatgccagagttctacctcagtgtggctatgaacagctacagtgcactcaagaac
tacttcagccctgtaaacagcatggaggaacttccaggctatgaagagactctgatgcgc
ctcgctgccatcctggccaaacattttgctgactcaaggatcgtgggcacagacatccgg
gactccctgatgcaggcgctggccagctacgtctgctacccgcactcgctgcgtgctgta
gagaggatcccagaagagcagcggatctccatgatgaagaacctcctggctccctatgag
cagcgaccctgggcacagaccaactggatcctcgtcaggctctggcggggctgtggcttt
gggtacagatacacacggcttccacacctgctgaaaaccaaacctgaggatgccagcctc
cccagccttcagaagccatgtccctccaccttgctgcagcggcacatggcagacctgctc
cgcagtgaccgtgacctggcccccagcttcctcaacagtgtcctcaaccagctgaactgg
gctttctctgagttcattggtatgatccaggagatccagcaggcagcagagcgcctggag
aggaacttcgtggacagccggcagctgaaggtgtgcgccacctgcttcgacctgtcggtg
agcttgctgagggtgctggagatgactgtcacgctggcaccagagatcttccttgactgg
agtcgcccctcctcggagctgctgcttcggaggcttgcccagctcttgaaccaggtgnnn
nnnnnnnnnnnnngggtgacagctgaaaggaacttgtttgacagagtggtcaacctccgt
ctgccagggctggagagtgtggaccattacccaatccttgtggctgtgacaggcatcctg
gtccggctgctcgtggacactgatgttcagggggctgagcgtgcgacagcagtgctgctg
gcagacccctgcttccagctgcgctccatccagtacctgctgggccatgccgagccctca
gccctggcagctgctgccccagctgcagacaagcgccacttctccctgcacacctacaca
gagtacatcagtgttgaggagctggcaaaggtggaaaagatgctgagccacctgagtgag
gagtccaagcaggcagctgccaccacattgcccaccagtgaggaagacctgtgcccaatc
tgctatgcacatccaatctcagccatcttcagaccctgctcccacaagtcgtgcaaagcc
tgcatcaatcagcacctgatgaacaacaaggactgcttcttctgcaaggccaccatcaca
ggggtggatgacttcaccaagccagccagctcttag
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integrated database retrieval system
