Dryobates pubescens (Downy woodpecker): 104306853
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Entry
104306853 CDS
T08526
Symbol
THBS1
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-1
KO
K16857
thrombospondin 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04115
p53 signaling pathway
dpub04145
Phagosome
dpub04148
Efferocytosis
dpub04350
TGF-beta signaling pathway
dpub04510
Focal adhesion
dpub04512
ECM-receptor interaction
dpub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104306853 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104306853 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104306853 (THBS1)
04148 Efferocytosis
104306853 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
104306853 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104306853 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104306853 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104306853 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dpub00536
]
104306853 (THBS1)
Membrane trafficking [BR:
dpub04131
]
Endocytosis
Phagocytosis
Opsonins
104306853 (THBS1)
Glycosaminoglycan binding proteins [BR:
dpub00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104306853 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
TM1586_NiRdase
Motif
Other DBs
NCBI-GeneID:
104306853
NCBI-ProteinID:
XP_009906166
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MTGPAAVLFLLLTLGASEAKRAAESRSDDNSVFDLFELVGFIRKGAGRRAPGVHLVKGPE
SSSPAYRIEDAGRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS
GHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEK
MENAELDIPIQNIFTRDLASSASLRMAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS
SSTSAIITLDNPINGSSPAIRTNYIGHKTKDMQAVCGFSCDELTNMFVELQGLCSIWVPT
LQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVS
CPLMPCSNATVPDGECCPRCWPSDYTDDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNR
CEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGK
PCEGEARENKACQKDPCPINGNWGPWSPWDTCTVTCGGGLQKRSRLCNNPEPQYGGKACV
EKARGAQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGIHCEDIDEC
KEVPDACFAFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTD
GTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYH
CKKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDEVGD
RCDNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQ
CDNCPLEHNPDQEDTDSDLIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGD
ACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDI
SETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTF
FINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGP
GEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIM
ADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgacggggccggcagcggttctcttcctcctcctcacgctcggcgcctccgaagccaag
cgtgccgcagagtccaggagtgatgataacagtgtctttgatctctttgaactcgttggc
ttcattcggaagggagctgggcgccgggcacctggggtgcacctggtgaagggaccagaa
tcctccagccctgcttaccgcatcgaagatgctgggcgcatccctgctgtccccgactcc
aagttccaagacttattagatgccatccatgccgagaagggcttcatcctcctggccact
ctccggcaagccaagaagagcaggggcacgctgctctctgtggaacagaaagatggctct
gggcacgtcttcagcctggtatccaacggcaaggcaggcaccctggacctcagcctgtct
ggcgacggcaagcagcagctcgtctcagtagaggatgccttgctagctacaggacactgg
aagaacatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa
atggagaatgctgaactggacatccccattcagaacatctttacgagggacctggccagc
agtgccagtctccgtatggccaaagggggagtcaacgacaacttccagggactgctgcag
aatgtgcggttcgtgttcggaaccactctggaaaccatcctgaggaacaaaggctgctcc
agctccaccagtgccatcatcaccttggacaaccccatcaacggctccagcccagctatc
cgcacgaactacatcggccacaagaccaaggacatgcaggcagtgtgtggcttctcctgt
gatgagctgaccaacatgttcgtggagctgcaggggctgtgctccatatgggtcccgacg
ctccaggacagagtgcgcaaagtgactgaagaaaatgagctcattgccaaagtggtccag
atcaccccgggagtgtgcattcataacggaatcttgcacaaaaacaaagaggagtggact
attgacagctgcactgaatgcacctgccagaactctgccaccatatgccgcaaagtgtcc
tgtcctctcatgccctgctccaacgccaccgtgcccgacggggagtgctgccctcggtgc
tggccgagcgactacactgacgacggatggtctccctggtccgagtggacgtcctgctct
gtgacctgcggcaacgggatccagcagagggggcggtcctgtgacagcctcaacaaccgc
tgcgagggctcttctgtgcagaccaggacttgccaccttcaggagtgtgacaagagattt
aagcaggatggtggctggagtcactggtccccatggtcatcgtgctctgtcacctgcggc
acgggcatcatcacgagaatccggctgtgcaactcgccagtgccacagctcaatggcaaa
ccttgtgagggcgaggcaagagaaaacaaagcctgccagaaggatccttgcccaattaat
ggcaactggggcccatggtctccatgggacacctgcacagtgacctgtggaggaggactt
cagaagcggagccgcctctgcaacaaccctgagcctcagtacgggggcaaggcttgtgta
gagaaagccagaggggctcaggtctgcaacaagcaggactgcccaattgatgggtgtctg
tccaacccctgctttgcggggaccacctgcaccagctcccctgatggctcctggaagtgt
ggtgcctgtcctgctggctatcatggggatggaatccactgtgaagatattgatgagtgc
aaagaggttcctgatgcctgctttgccttcaatggagtgcacaggtgtgagaacaccgaa
cctggctacaactgcctgccttgtccaccacgcttcactgggacacagccctttggacgc
agtgtggaggatgccatggccaacaaacaggtgtgtaagccacgtaacccctgcacagat
ggcacacatgactgcaacaagaatgccaagtgcaactaccttggccacttcagtgacccc
atgtaccgctgcgagtgcaagccaggctatgctggcaacggcatcatctgtggcgaagac
actgacctggacgggtggcccaacgagaacctcgtctgtgtggccaatgccacctaccac
tgtaaaaaggataactgccccaatctgcccaactctgggcaggaagactatgataaagat
gggattggtgatgcctgtgacagtgatgatgatgacgatggaattcctgatgaccgggac
aactgtcccttcatctacaacccccagcagtatgactatgacagggatgaggttggtgac
cgctgcgataactgcccctacaaccacaaccctgatcagactgacactgacaacaatggg
gaaggagatgcctgtgcagtggacattgatggggatggagtcctcaacgaaagggacaac
tgccagtacgtctacaacgtagaccagagggacacagacctggatggtgttggagatcag
tgtgacaactgtcctctggaacacaaccctgaccaggaagacaccgattctgacctcata
ggggatcagtgtgacaacaaccaggacattgatgaagatggccatcaaaataaccttgac
aactgcccctatgtgcccaatgccaaccaagctgaccacgataaggacggaaaaggcgat
gcctgcgaccatgatgatgacaatgatggtatccctgatgacaaagacaactgcagactg
gttgccaacccagaccaagccgattcagatggcgatggacgtggggatgcttgcaaagat
gactttgaccaagacagcgtgccagacattgatgacatctgccctgaaaacgtggacatc
agtgagactgacttcaggaagtttcagatgattcccttggatcccaaaggaacatcccag
aacgatcccaactgggtggttcgtcaccagggcaaagagctggttcagacagtcaactgt
gaccctggccttgctgttgggtttgatgaattcaatgctgtggacttcagtggcaccttc
ttcatcaacacagagagggatgatgactacgctggctttgtgtttggctaccagtctagc
agtcgtttctatgttgtgatgtggaagcagatcacccagtcctactgggactctacgcca
accaaagctcagggctactcgggtctctccatcaaagttgtgaactccaccacgggccca
ggagagcaccttcggaatgctctgtggcacacggggaacacccccgggcaggtgagaacc
ctgtggcatgacccccggcacataggctggaaagacttcactgcgtacaggtggcggctg
agccacagacccaagactggctacatcagggttgtgatgtatgaagggaagaaaatcatg
gcagactcaggacccatctatgacaagacctacgctgggggccggctagggctgtttgtg
ttctctcaagaaatggtcttcttctcagatctgaaatatgaatgcagagatccatag
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integrated database retrieval system
