Dryobates pubescens (Downy woodpecker): 104307315
Help
Entry
104307315 CDS
T08526
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104307315 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpub03400
]
104307315 (TDG)
Enzymes [BR:
dpub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104307315 (TDG)
DNA repair and recombination proteins [BR:
dpub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104307315 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104307315
NCBI-ProteinID:
XP_009906663
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MRKLGDEKTGNRPRPSAHSPSPPIQLTRRTCVTASACSAAAARRRERRGPAPRSTPLRVT
RPSERRGRCLERELCGKFAGVGGRATGICGRWCGYYAYLQQAQAFYTFPFHQMMTAAPNM
EIMTEQPTLEGVPEPNIAQEPPKEVKKGGRKRKAKATEPKQPKKPAAKKEKSTKSKGKQE
KITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPG
NHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEFREGGRILM
QKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARC
AQFPRAQDKVHYYIKLKDLRDQLKGIAPNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDP
GYEAAYGGAYCDRTPYGSEPCNFSSNGSAAGNPQYCEGASFGEVPNGQWMTQSFADQIPE
FSTGVTREEEGSST
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaactcggagacgagaaaaccgggaaccgaccacggccaagcgcccactccccc
tcccccccaatacagttaacgcgccggacgtgcgtcactgcctccgcctgcagtgcggcc
gcagcacggcggcgagagcgccgaggcccagccccgcggagtactccgctacgggtgaca
cgcccgagtgagcgccgagggaggtgcctggagcgggagctctgcgggaaatttgcgggg
gttggtggtcgtgcgacggggatctgcgggcgctggtgtggatactacgcgtatcttcag
caagctcaagcgttttacacgtttccgttccatcagatgatgactgcagcgccgaacatg
gaaatcatgacagagcagccgactctagagggcgttccagagccgaacattgctcaggag
cctccgaaagaagttaaaaagggaggaagaaaaagaaaagccaaagcaactgagccaaag
caacccaaaaagcctgctgctaaaaaagaaaagtccaccaagtcaaaaggcaaacaagaa
aagatcacagacacctttaaagtcaaacgaaaagtggatcggtttaatggtgtgtctgaa
gcggaactgctcaccaagacgttacctgatattttgaccttcgatctggacattgtaata
attggcataaatcctggcttgatggcagcttacaaaggacatcattaccctggacctgga
aaccatttttggaagtgtctgttcatgtctggtctaagtaatgaacaactgaaccatatg
gatgaccacaccttgccacataaatacgggattggatttacaaacatggttgaaaggaca
acacctggaagcaaagacctctccagcaaagagtttcgggaaggagggcgcattctgatg
cagaagttacagaagtataaacctcgtatagcagctttcaatggaaaatgtatttatgaa
atttttagtaaagaagtttttggaataaaggttaagaacttggaatttggactgcagcca
cacaaggtgccagatacagaaactctctgctacgttatgccatcatccagtgcaagatgt
gctcagtttcctcgtgcacaagataaagttcattattacataaagctgaaagatctaagg
gatcagctgaaaggcatcgcaccaaatacagaggtgcaggaggtgcagtacacgtttgac
ttgcaacttgcacaagaggatgctaaaaagatggccgtcaaagaagaaaagtacgatcca
ggttacgaagcagcatacggaggagcttactgtgatcgcacaccatatggaagtgaaccg
tgcaacttctcttcaaacggatctgcagcaggcaatccacagtactgtgagggggcatcc
tttggtgaagttcctaatggacaatggatgacgcagtccttcgcagaccagattccggag
ttcagcactggtgtgacacgggaagaagagggaagcagcacgtaa
DBGET
integrated database retrieval system
