Dryobates pubescens (Downy woodpecker): 104308028
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Entry
104308028 CDS
T08526
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04115
p53 signaling pathway
dpub04210
Apoptosis
dpub05164
Influenza A
dpub05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104308028 (APAF1)
04115 p53 signaling pathway
104308028 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104308028 (APAF1)
05168 Herpes simplex virus 1 infection
104308028 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
NB-ARC
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_Aladin
NBCH_WD40
WDR90_beta-prop_4th
CFAP251_N
CARD
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_VPS8
CARD_2
Beta-prop_IFT140_1st
Beta-prop_SCAP
ASA1
Beta-prop_NUP159_NUP214
eIF2A
PEP5_VPS11_N
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_DCAF12
WDR54
Beta-prop_WDR11_2nd
AAA_16
DUF2415
AAA_22
PAC11
nSTAND6
WHD_Dark
Beta-prop_RSE1_2nd
LRRC37
Motif
Other DBs
NCBI-GeneID:
104308028
NCBI-ProteinID:
XP_009907455
UniProt:
A0A093H1R3
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MDVKSRNYLLMNRQALQRDIKTAYIMDRMISDEVLTLQEEERVRQQSTQEERAEMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPPVSSGNRKSSMDGMTSHVKTVLCEGGVP
QRPVVFVTRPKLVEAIKEKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDCFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
ILDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANLLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNYKDYYKDLSVLPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVPSQEDC
MYWYNFLAYHMAGANMEKELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKDSTV
RENFQEFLSLNGHLLGREPFPDIIQLGLCQPETSEVYQQAKLHAQRERGTFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLGISAHDDEVLC
CSFSADGELVATCSADKKVKIWNSRTGQCRSVYEHVEQVNCCQFNNRSGQYLLATCSNDT
FIKLWVLSENRCRNTMIGHQNSVNHCRFSPNDEYVASCSTDGTVKVWDTRSGNEQKSIEI
KDFFRNAEEQPDDVEVLVKCCSWSRNGDVILVAAKNKLLLFDVKTCDLLSQVIANHHSTI
QYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSLDGSLFLTSSDD
QTIRIWETKKVCKSSDAVLKSELDVVFHNDEVMILAIYNQKHLQLINGNTDSVIMQTSAQ
ESPISCCCLSEDLKFAAFGQENGAIKVLQLVDGKVLKSQEAYRISVQHCRFTSDCQTLIS
SAHDSVIQVWNWQSNECVFLRGHKEAIKDFRLLENSKLLSWSFDGTVKVWDITTGNTEKD
FACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKGHEACVRCCAFSPNNN
LMATGDDKGEIRIWDILTGALLHFCSPVTVDEGEPAHGGWVTDLSFSPDSNMLVSAGGYL
MWWNVTTGESLQTFYTNGTNLKSIHVSPDFAVYVTVDNLGILYVLQKL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaaagcagaaattatttacttatgaatcgccaagctttgcagagagacatc
aagactgcttacattatggatcggatgatctctgacgaggtgctaacgctgcaggaggag
gagagagtgagacaacagagcacacaggaggagcgagcagaaatgctaataaacattatt
cttacaaaagataataactcctatagatccttctataatgcactgcttcatgaaggctac
agagatcttgctgcgcttcttcaggatggcatccctccagtctcctctggtaacagaaag
agttcaatggatggaatgacttcacatgtgaaaacagttctctgcgaaggaggtgtgcca
cagagaccagttgtgttcgtcacccggccaaagctggtagaagctattaaagagaagctc
tactgcttgggaagtgatccaggctgggtcacagtttatggaatggcaggttgtgggaag
actgttttaacagcagaagctttaagggatcatcagctcttggaagattgctttccagga
ggagtccattggatctctgttggaaagcaggacaaagcagggctcctaataaaacttcag
aatctctgtagcagattagaacatgactctaccctttcacaaaggccaccacttaacatt
gaggaggctaaagatcgtctgcgtttgctgatgctacggaagtatcccaggtctcttttg
atcctggatgacatttgggattcctgggtattaaaagcattcgataatcaatgtcaggtt
cttatcaccagcagggacaggagcgtaacagacgctgtggccggcaataaatacgaggtt
catgtggaaagtggactagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagaactaccagagcaagctaacctccttgtaagggaatgtaaaggttct
cctcttgtaatatccttgatcggtgcattattacgagacttccctagtcgctgggagtac
tatctcagacagctgcagaacaagcagtttaaaagaataagaaaatcatcttcttatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcagctgaatgacaattataaa
gactactataaagacctctctgtcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagtggaagatatactgcaggagtttgttaac
aagtcactattgttctgtgaccgcaatgggaagtcattccattattatttacatgatctt
cagctggactttcttacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatactacaaactgaatacacctgttccatctcaagaggattgc
atgtactggtacaactttctagcctatcacatggctggtgccaacatggagaaggaactc
cgtgaccttatgttctctttggactggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagagtatagttcaatcctggatcaaaaggatagcacagta
cgtgagaacttccaggagttcctgtctctaaatgggcacctgcttggaagagagccattt
cctgacatcatacagctgggtctttgccaaccagagacatcagaggtgtatcaacaagcc
aagctccatgctcaaagagaaagaggaacattttatttggaatggataaataaaaagtcc
ttgaagaacctctaccggctggttgttcgtccacacagagatgcagtttaccatgcctgc
ttttctaaggacagacaaagaatagcatcctgtggggctgacaaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggggataagtgcccatgatgatgaagtactgtgc
tgctctttctctgcagacggtgagcttgtagcaacttgttcagctgataaaaaagtgaag
atctggaactcaagaacaggccagtgcagaagtgtgtatgaacatgtggagcaggtgaat
tgctgccagttcaataacaggagtggtcagtatcttttagccacctgctcaaatgacact
ttcatcaaactttgggttctgagtgaaaaccgttgtagaaacacaatgatagggcatcag
aattccgtcaatcactgcagattttcaccaaatgatgaatatgttgctagctgctcaaca
gatggaacagtgaaggtgtgggacacacgctcaggtaatgaacagaagagtattgagata
aaagatttcttcagaaatgcagaggagcagccagatgatgtggaagttttagtgaaatgt
tgctcctggtccagaaatggtgatgtgattttggtggcagccaaaaataagcttttgctt
tttgatgttaagacgtgtgatttgttgtcacaagtcattgcaaaccaccacagcaccatc
caatactgtgacttctgtcctggtgatgagttagtagcagttgctttgtctcactgttct
gttgagctatggaacattaaatctctctcaaaagtggcatactgcaggggacacatgagc
tgggttcattgtgtaacattttccctagatggatctttatttctgacatcttctgacgac
cagacaatacgtatttgggagaccaagaaggtgtgcaagtcttctgatgctgtgctaaaa
agtgaactggatgttgtgtttcacaatgatgaagtgatgattttagccatttacaaccag
aagcatttacagcttatcaatggaaacacagacagtgtcattatgcagacatcagctcaa
gaatcccccatttcctgctgttgcctaagtgaggatcttaaatttgcagcatttggacag
gagaatggagcaataaaggtattacagttggtggatgggaaggttctgaagtcccaggag
gcctacaggatatctgtgcagcattgtcgctttacctctgattgccagactctcatttcc
agtgcccatgactcagtcatacaggtgtggaattggcagtcaaatgaatgtgtgtttctg
agaggacacaaggaagcaatcaaggattttagacttctggaaaattccaaacttctttct
tggtcatttgatggaactgtgaaggtctgggatatcactacaggaaacacagaaaaagat
tttgcttgccatggaggtgctgttctgtcctgtgctgtttcacctgatggtagtaaattt
tcatctgcttctgctgacaaaactgcaaagatctggagctttgaaagttcttctgttctt
catgagctgaaaggtcatgaagcctgtgtaaggtgctgtgctttctctcctaataacaac
ttaatggccactggagatgacaaaggagaaataaggatttgggacattctaacaggtgca
ttacttcacttctgctctccagttactgtagatgaaggagaaccagcacatgggggttgg
gtgacagacctctcgttttctcctgacagtaacatgcttgtgtcagctggaggctatctt
atgtggtggaatgtaactactggagagtccttacaaaccttctacaccaatggaacaaac
ctcaagtcaatccatgtgtcccctgattttgcagtgtatgtgactgttgataatcttggt
attctttatgtactgcagaagttgtga
DBGET
integrated database retrieval system
