Dryobates pubescens (Downy woodpecker): 104309991
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Entry
104309991 CDS
T08526
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04010
MAPK signaling pathway
dpub04020
Calcium signaling pathway
dpub04510
Focal adhesion
dpub04540
Gap junction
dpub04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dpub01001
]
104309991 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dpub04090
]
104309991 (PDGFRB)
Enzymes [BR:
dpub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
104309991 (PDGFRB)
Protein kinases [BR:
dpub01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
104309991 (PDGFRB)
CD molecules [BR:
dpub04090
]
Proteins
104309991 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
104309991
NCBI-ProteinID:
XP_009909685
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MLHLPLKASLWLLILTSLLQGTSGGSGLRVEPGDTELVLDLHSSFSLLCYGDRELVWERE
GQPLAASLEKRDGVFISNLTLSNVTGRQTGEYACTYSPQQAAEPLERKALYIYVPDPSLV
FLPTITSEELFIFITGYTEAIIPCRVTNPQMQVTLYEKKVENPIPAAYDPQQGFRGFFED
KTYFCRAVVDDQEVDSDTFYVYRIQVSSVNVSISAVQTMVRQGENITLMCTVSGNELVNF
NWDYPRKQAGKTVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
IAVHVIERGFVRFHTNLPSTVYAEVHKSHTIQVEVEAYPQPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSACSDIKGCSSEGQPRRLLGNESAEIGLQTNASYHS
ELQLYRVRSTLQLHGLDQPLLLRCSVHNALGSSSQDITLVPHALPFKVLIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSCGEKARRDTELYGNTPKQDHG
QSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIDSSNYGTPYELDSYAPSAPD
RTDRMTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMAKPTHASEEIYDIMQKCWEEKFETRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPILPGLNNARLHASAPSSSILYTAVHQDGGENDYI
IPLPDPKPEASCELPQEPSASRASSVLNEANTSSTISCDSPLGLQQDEEQEPDPQPGCQE
PTTGHQEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctccctttgaaggcatctctctggctcctcatcctcaccagtctgctgcaa
ggaacgtctgggggcagcgggctgcgcgtagaacctggagacactgagctcgtcctcgac
cttcacagcagcttctccctcttgtgctatggggacagggagctggtctgggagcgggag
ggtcagcccctggctgcctcactggagaagagggacggtgtcttcatcagcaacctcacc
ctcagcaacgtgacgggccggcagacgggcgagtacgcctgcacctacagcccccagcag
gctgcagagcccctcgagaggaaagctctctacatctacgtcccagatccctccctagtc
ttcctccccacaatcacctctgaagagctcttcatcttcatcacgggctacacggaggcc
atcatcccatgccgggtgaccaacccacagatgcaggtgaccctctatgagaagaaggtg
gaaaaccctatcccagctgcttatgacccacagcagggattcagaggcttctttgaggac
aagacctatttctgccgggcggttgtggatgaccaggaggtggattcagacactttctat
gtctacaggatccaggtctcatctgtgaacgtctccatcagcgcggtgcagaccatggtg
cgccagggagagaacatcaccttgatgtgcaccgtgagcggcaacgagctggtcaacttc
aactgggattacccccgcaagcaggcagggaagactgtggagccggtgaccgacttcctg
cctggatccacccacgagatccgctccatcctcatcatccagaacgcagagctggaggac
agtggcacctatgtctgcaatgtctctgagggctaccatgagaaaacagaccggaaggac
attgcagtccacgtcattgagcgtggctttgtgcgcttccacaccaacctgcccagcaca
gtgtacgctgaggtgcacaagagccacaccatccaggtggaggtggaggcatacccacaa
cccagcattgtgtggctgaagaacaacaagactctgaccatggagagcagcagtgagttc
accatcaccagcaggaacctgtctgaaactaggtaccaaacagctctggtgctggtgcgg
gtgaagcaggaggaaggaggattttacaccatccgagcttccaacgaggatgatgagcag
gagctctctttccacctgcagataaatgtgccagccaaagtggtggatctcaaggagaac
agcagtgccagcagcggggagcagacagtgacatgctctgctgaaggcatgccccagcca
gagatcagctggtctgcatgcagtgacatcaaagggtgcagcagcgaggggcagcccagg
cggctgctggggaacgagtctgcggagatcgggctgcagaccaacgcctcctaccacagc
gagctgcagctgtaccgagtcagaagcaccctgcagctgcacggcctggaccagcccctg
ctcctcaggtgctccgtgcacaacgccctgggcagcagctcgcaggacatcacgctggtg
ccgcacgccttgccattcaaggtgctcatcatctccgtcatcctggccctgctggtcctc
actgtcatctccctcatcatcctgatcgtcttgtggcagaagaagcctcgctatgagatc
cgctggaaggtgatcgagtcggtcagctccgacgggcacgagtacatctacgtggatccc
atgcagctcccctatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
actctcggctccggggccttcggacgcgtggtggaggcaacggctcacggtctgagtcat
tcacagtccaccatgaaagtggcagtcaagatgctcaagtccacagcccgaagcagcgag
aagcaagccctcatgtccgagctgaagatcatgagccacctggggcctcacctcaacatt
gtcaacttgctgggggcctgcaccaaaggagggcccatctacatcatcacggagtactgc
cgctacggcgacctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctgt
ggggagaaggctcgcagggacacggagctctatggcaacacccccaagcaggaccacggc
cagagccacctctccttgtctgtcgagagcgatgggggctacatggacatgagcaaggat
gactccctggattatgtgcccatgtctgacatgaagggggaagtcaagtatgctgacatt
gactcctccaactatggcaccccctacgagctggacagctatgccccgtcagctcccgac
agaacagacaggatgacgctgatcaatgagtctccactcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaactgtgtgcat
cgtgacctggctgccaggaacgtgctcatctgtgaggggaagctggtgaagatctgcgac
tttggcctggcgagggacatcatgagggactccaactacatctccaaaggcagtaccttc
ttgcccctgaagtggatggctccagagagcatcttcaacaacctctacaccaccctgagc
gatgtgtggtcctttgggattctcctctgggagatattcactctaggggggactccctac
cctgagctgcctatgaacgaacagttctacaacgccatcaagcgtggctatcggatggcc
aaacccacccatgcctctgaggaaatctatgacatcatgcagaagtgctgggaggagaag
tttgagaccaggccgtccttctcgcagctggtggtgctgatgggaaacctcctggtggac
tgctacaggaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgcg
gtcgtccgcacaagacccatcctccccgggctgaacaacgccaggctccacgccagcgcc
cccagcagcagcatcctctacacggctgtgcaccaggatgggggcgagaacgactacatc
atccctctgcccgaccccaaacccgaggcaagctgcgagctcccgcaggagccctccgcc
agccgcgccagctctgtgctgaatgaggccaacacatcatctacaatatcctgtgacagc
cctctgggcctccagcaggacgaggagcaggaacctgacccacagccaggctgccaggag
ccaaccacagggcaccaagaggtggaggagagctttctgtag
DBGET
integrated database retrieval system
