Dryobates pubescens (Downy woodpecker): 104310069
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Entry
104310069 CDS
T08526
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104310069 (KDM1A)
Enzymes [BR:
dpub01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
104310069 (KDM1A)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
104310069 (KDM1A)
REST complex
104310069 (KDM1A)
Histone demethylases
104310069 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_oxidored
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
GIDA
MurD-like_N
Lycopene_cycl
IlvN
DUF1180
CdiI_2
Motif
Other DBs
NCBI-GeneID:
104310069
NCBI-ProteinID:
XP_009909772
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDS
SGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWL
DNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVI
IIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPM
AVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN
NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQY
KEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLS
SRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGL
DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP
LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPI
LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYS
YVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA
GRIADQFLGAMYTLPRQPTPGVPPQQAASM
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtcttgcaaacctgtcagaagatgaatattactctgaagaagagagaaat
gctaaagctgagaaagagaaaaagctaccaccaccacctccaccagctcctgcagaagaa
gaaaatgaaagtgagccagaggagccatctgggcaagcaggaggacttcaagacgacagt
tctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagtaga
cttccacacgaccgtatgacatctcaagaagctgcctgcttccctgatataatcagtggg
ccccagcaaactcagaaggtgtttttgtacatcaggaaccgcaccctgcagctctggctg
gataatccaaagattcagctgacatttgaggcaactatccagcaattagaagcaccttat
aacagtgacaccgtgctggttcacagagtacacagctatctggagcggcatgggctcatc
aacttcggcatctacaaaagagtgaagccccttcccaccaagaagactgggaaggtgatc
atcatcggttctggagtctctgggttggcagcagctcgccagctgcagagttttggaatg
gatgtcacagttctggaagccagggaccgggtaggaggaagagttgcgaccttccgcaaa
gggaactacgttgctgacctgggagcgatggtggtgacaggacttggaggaaatcccatg
gctgtggtcagcaagcaagtgaatatggaattggctaagatcaaacaaaaatgcccactc
tatgaagcaaatggacaagctgtcccaaaagagaaagatgaaatggtggagcaagaattt
aatcgtcttctggaagccacatcctatctcagtcatcagctggattttaatgttctcaat
aacaaacctgtgtccctgggtcaggctctggaggttgtcatacaattgcaggagaagcat
gtgaaggatgagcagattgaacactggaaaaaaattgtgaaaacacaggaggagttgaaa
gatctgcttaacaagatggtgaatttgaaagagaaaattaaagaacttcatcagcagtat
aaggaagcctcagaagtgaagccacctcgtgatattacggcagagttccttgtgaaaagc
aaacacagagatctgactgcactctgcaaggagtatgacgaattggcggaaacacaagga
aagctggaagagaagttacaagaacttgaagccaatccacccagtgatgtttacctgtca
tcaagagacaggcaaatactcgactggcattttgccaacctggaatttgccaacgccacg
ccgctgtccacgctctcgctgaagcactgggaccaggatgatgactttgaattcacaggc
agccacctgactgtgaggaatggctattcctgtgtgcctgtggcactggcagaggggttg
gacatcaaactgaacacagcagttcgacaggttcgctacacagcgtcaggctgcgaggtg
atagctgtgaacacccgatctaccagccagactttcatctacaagtgtgatgctgtgctg
tgtacccttcctttgggagtgctgaagcagcagcctccagcagtacagtttgtgccacct
cttcctgagtggaaaacttctgcagtgcagcgcatgggatttggcaaccttaacaaggtt
gtgctgtgtttcgatcgtgtcttctgggatccaagtgtcaatttgtttggccatgttggc
agcactactgccagcagaggagagctcttcctgttctggaacctgtacaaagcacccata
ttgttggccttggtggcaggagaagcagcagggatcatggagaacatcagtgacgatgtc
atcgtggggcgctgcctcgccatcctcaaaggcatcttcggcagcagcgccgtgccgcag
cctaaggagaccgtggtgtcccgctggcgtgctgacccatgggcccgagggtcctactcc
tatgtagcagctggatcttctgggaatgactatgatttgatggcccagccaattactcca
gggccagccattccaggtgctcctcagcccatccctcggctgttcttcgcgggagagcac
accatccgcaactaccctgcgacggtgcacggcgcgctgctgagcggcctgcgggaagca
gggcgcatcgccgaccagttccttggggccatgtacactctgcctcgacagcccacacct
ggggtccccccacaacaagctgccagcatgtga
DBGET
integrated database retrieval system
