Daphnia pulex (common water flea): DAPPUDRAFT_239212 Help Entry DAPPUDRAFT_239212 CDS       T04347                                  Name (GenBank) hypothetical protein   KO K11124   protein SMG6 [EC:3.1.-.-] Organism dpx  Daphnia pulex (common water flea) Pathway dpx03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:dpx00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     DAPPUDRAFT_239212  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dpx03019]     DAPPUDRAFT_239212    03032 DNA replication proteins [BR:dpx03032]     DAPPUDRAFT_239212 Messenger RNA biogenesis [BR:dpx03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      DAPPUDRAFT_239212    mRNA cycle factors     Common to processing body (P body) and stress granule      DAPPUDRAFT_239212 DNA replication proteins [BR:dpx03032]  Eukaryotic type   DNA Replication Termination Factors    Telomerase complex (animals)     DAPPUDRAFT_239212 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  EST1_DNA_bind EST1 Motif Other DBs NCBI-ProteinID:  EFX83998 JGI:  Dappu1_239212 UniProt:  E9G8N1 LinkDB All DBs Position Unknown AA seq 1561 aa AA seqDB search MNADIDHSRSSRRPRPEVAVYRPGSGPLKKSSSNVENIQPGSSLQGTGRADIDAGLESNF RNVNLNDESNKSKDRGGEVHTQESKTRRTNNQRQDRNADKPRTENHHQQHTNKKKEEFKE PPVPSNQGKRQLYYQDNVDTGSNQDLRQLLEKRQQRSNESPATGHHESSPTPNQPSNGKQ KNDNRQERQPVKPKEEARASQPTDPFPPNNVSKSTSIDSSLLSRQSDKRSSGRRRNDRKP RVENSFSEGHLASLTNNNSSAAATKPPSSKTVEEKTATSGNWNDSERSKNNSKDKRDGSG RSGIGRKKRNNRGPGGSRRGSFSSEAGTPVPDRDVRGTSSTSRPDDYNYYQSTTPTRFVL LVDEDKPTKRVGGSGGYYQATGSSRSRHTSSPQSSTSRNGMIVEENPVANAVSPTSTSRR TPSITSPSPSPGYRQSSEPPGNPKFQGQAQKNSGRDQRREGLFDERSQDSYRSDGRPPSG RGGYSKNERPSMPNKYDSLPPRFKKKYEEDRLHPSQPDRIPQTAVHPSPVETEWDGGSCT FVKISGAPAVRPSLPHPFPQSSPHVSSIRPQHLPQQHHRPGSGGGGKPIRGQGRHQQATG FAAKTMPLSDQAEDSDPVHVPVRPRSQDSMSFSDRERKTSVTDSRSSTPLSNVDSSSGLQ SHLRGTLRRLEEVTATQTSLDWSEEMEEEDKRSQAGFRQAPPARLPEKAPEIVFACTDIR YKNKPIQGYIVLPTAASSTNGVDVDRQTGPTPPPMTGRPLLGQGRRQEAGKSGPPRMSVP GLIQLPIGPPPSMEQSRLSSSPRRSDFPAPSASSYDRSSIPRQQDHNRGAGDVANRSYPR KTGPVQQRTLFDPANPHKPIVVATRADDGPNSQQSTAASSLGCPEMTFLTLPADQSNVNS SARPAWYDPQSENFRSSKSHPHLLMDMARCDMELSWLLHGQGLHQRFGRIQMNRKFFQNS LRIMLANDLRFCAMENVEQHMWKVAFHNVIEALRKATAEEPEVKENYRSLLFNVIDEGTA YFEMLLETLQEAHKFNLETYLEPQPYPLLSGLGYVGLAIISCQKILIFLGDLARYREMTA ETSNYGKAKSWYTKANLTNPKNGRPYNQLAILALYARRKLDAVYLYMRSLMASNPFQSAR ESLVSLFDENRKKYEQQERKRREAKEVSSNRRKESAASSSSSSGVVSDAAKIDRLELRRE IWIHPLDGRRTRRTTSTGTNGASDSNGLNSDDEELAQLPSIEVNKRFVTSYLNVQGKLYT KIGMETFQECGVQMLREFRALLQQTPLPVNQTRLLQLLALNMFAVSNTQLKDARMAGGCR SAWQECALVVSLEMFNILLERCNAMLKEQLETGSHSNNNPGGTTSLASSRLLGEDLQIIL PAIKVWCDWLLCHSSVWNPPPTSRDYHVGPPGTPWTRLATLINLLSRFDTRQVEISNKQL EGYEAVKLPEDVTLCGFTPLMLNIQEPRYTPKSSDMLTGERGHTISSGDMAADCVRIERM LYFGRDFLCGLDPPVLKLKFSGPSLSEYVSVVDSSSSASCSSSAKNGPPHLLLAAQSSER E NT seq 4686 nt NT seq  +upstreamnt  +downstreamnt atgaatgctgatattgaccattcgcgttcgtcgcgaagaccaaggcctgaagttgctgtt taccgtcctggatcaggacctctgaaaaagtcaagcagcaatgttgaaaacatacaacca ggcagcagcctgcaaggcactggaagagcagacattgacgctggtcttgaatcaaatttt aggaatgtcaatttaaatgatgagagcaacaaatctaaagatcggggtggtgaggttcac actcaagaatccaaaacgagaaggaccaacaaccagagacaagatagaaatgctgataag ccgagaacagaaaatcaccaccaacagcacaccaacaaaaagaaggaagaattcaaggaa ccccctgtcccgagtaatcaagggaagaggcagctgtattaccaagacaatgtggataca ggatcaaatcaagaccttcgacagcttttagagaaacggcagcagaggagcaatgaatcc ccagcaactggtcaccacgagagcagtccaactccaaatcagccctcaaatggcaaacag aagaatgacaaccgtcaagaaagacaaccagtcaagccaaaagaagaagcgagggcgagc cagcctaccgaccctttcccaccgaataacgtttcaaaatctacatccattgattcgtcc ctgctgtcaaggcagagtgataaaagaagttcaggcagacgccgaaacgatcgcaaacct cgagtagagaattcgttttccgaaggacaccttgcttctttaactaacaacaattcttca gcagcagctacgaaacctccctcatccaaaactgttgaagagaagacggctacaagtggt aattggaacgattcagagagaagcaagaacaatagtaaagacaaacgagacggaagtgga cgcagtggcattggtaggaagaaacgaaacaatcgcggtcctggaggcagtcgacgggga tctttttctagtgaagctggaactccggttcccgatcgtgatgtcagaggcacaagtagc acttccagaccagacgattacaactattaccagtcgactacgccaactcggttcgttctt ctggtggacgaagataaaccaacgaagagagttggaggaagtggtggatactaccaggcc actggttccagtcgaagccgccacacttccagccctcaaagcagcaccagcaggaacggg atgattgtcgaggagaatcccgttgccaacgcagtgtctccaacgagcacttcacgtcgc acaccatcgatcacctcgccgtcgccatcacctggttatcgtcagagttcagaaccgcca ggcaaccctaaattccaaggccaagcgcagaagaattccgggcgagaccagagaagggaa ggactttttgatgagagatctcaggactcttaccggtcggatggaagacccccatccggc cgtggaggatactctaagaacgaacgcccttcgatgcccaacaaatacgattcgcttcca ccacgtttcaagaagaaatacgaagaggatcgcctgcatccatcacaacctgaccggatt cctcaaacggccgtccatccgagtccagtcgaaaccgaatgggatggcggttcatgtact tttgtcaaaatttccggagccccggcagttcggccatcgttgcctcaccctttcccgcaa tcctcgcctcatgtctccagcatccggccacaacatctaccgcaacaacatcatcgacca gggtctggaggtggtggcaaaccgatccgaggccaagggcggcatcagcaagcaacagga ttcgctgccaaaacaatgccactgtctgatcaggcggaagattccgatcctgttcatgtt cctgtacgacctcgcagtcaagattccatgtcgttctccgatcgggaacgcaaaacatcg gtgacggactctaggagctccacgcctttgtccaacgtcgacagcagttccggcttgcag tcccacctgcgtggcactcttcggcgactggaggaggtgacggccactcagacgtcgctg gattggagcgaagaaatggaagaagaagacaagagaagccaagcaggattccgacaagct ccaccggccagacttccggaaaaagctccggagatcgtcttcgcttgtacggatattcgt tacaagaataaacccattcaaggatacatcgtcctcccaacggcagcctcttccaccaac ggagtggatgtcgaccgacagactggacctacgcctccaccgatgactgggcgacctctc ctgggccagggtcgtaggcaggaagcgggtaagagcggaccaccgcgaatgtccgttcca gggttgatccagctgccaattggacctccaccgtctatggaacaatcgcgcctttcctct tctcccaggcgaagtgatttcccggctccttcggcctcctcgtacgacagatcgtccatt cctcgtcagcaggatcataaccgtggcgccggtgacgtggccaatcgttcctatcctcgc aaaactggcccagtgcagcagcgcaccctgttcgatcctgccaatccacacaagccgatt gtggtggccaccagagccgatgacggacccaatagccaacaatcgacggccgcatcgtcg ctaggttgcccggaaatgactttcctgactcttccggctgatcaaagcaacgtcaattct tctgcaaggccagcgtggtacgacccacagtctgaaaatttccggagcagcaaaagtcat ccgcacctccttatggacatggcccgttgcgacatggagttgtcgtggttgcttcacggt caaggtctccaccagcggttcggccgcatccagatgaacaggaaattcttccagaacagc ttgcggatcatgttggccaacgatttgcgcttctgcgctatggagaacgttgagcagcac atgtggaaggtggcattccacaatgtcattgaagcattgcgcaaggccacggccgaagaa cccgaagtcaaagagaattacaggtctctcctgttcaacgtcattgacgagggaaccgcc tatttcgagatgctgttggagacgctgcaagaggcgcacaaattcaacctggaaacgtac ctcgagccgcagccttaccctttgctctcgggactgggctacgttggcctggccatcatc tcgtgtcaaaagatcctcatcttcctcggcgatttagcccgttatcgtgaaatgacggcc gaaacgtccaactacggcaaagccaaaagttggtacactaaagctaatttgactaacccg aaaaacggccgaccgtacaatcaactggccattttggcactctacgcgagacgcaagctg gatgctgtttacctttacatgcgcagtttaatggcctccaatcctttccaatcggccagg gagagcctcgtctccctattcgacgagaatcgtaaaaagtacgaacaacaggagcgtaaa cggcgcgaagccaaggaggtcagcagcaatcgccgcaaagagtctgcagcttcttcttct tcatcgtcgggcgttgtttccgacgctgccaaaatcgaccgtctggaattgagacgagaa atttggatccatccgctggatgggcgccggacccgccggaccaccagcaccggcaccaac ggtgcctccgactctaatggcctcaacagcgacgacgaagagctggcccagctgcccagc atcgaggtcaacaagagattcgtcaccagttacctgaacgtccagggcaaattgtacaca aagatcgggatggaaacgtttcaagagtgcggagtccaaatgctgcgcgaattccgggcc ctcctccagcagacgccgttgcccgtcaaccaaacccgtttgctgcaattactggcgctc aacatgttcgccgtatccaacactcaactcaaagatgcccggatggctggcgggtgtcgt tcggcctggcaggaatgcgccctggtcgtttccctggaaatgttcaacatcctgctggaa cgttgcaacgctatgctcaaggagcagctggaaacggggagccacagtaacaacaacccc ggaggaacgacaagcctggccagtagtcgactgctgggcgaggacctacaaatcatctta ccggccataaaggtgtggtgcgattggcttctgtgccacagttccgtctggaatccaccg cccacctcccgtgactaccacgtcggaccgcctggaacaccctggacacgtttggccacg ttgattaaccttttgagtcgcttcgacacgcgtcaagttgaaattagcaacaagcaactg gaaggttacgaagctgtcaaactgcccgaagatgtcactctttgcggtttcacgccgctg atgctcaacatccaagagccgcgctacacgccgaaatcatccgacatgttgacgggcgaa cgcgggcacacgatctcttctggggatatggcggctgattgcgtgcggattgaacggatg ctctacttcggccgcgactttctctgcggcctcgacccgcccgtcctcaagctcaagttc tcgggaccgtcgctgtccgaatacgtttccgtcgtcgactcttcttcgtccgcttcatgt tcctcctccgccaaaaacggaccacctcatctactcctcgcagcccagtcgagtgaaaga gaataa

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