Daphnia pulex (common water flea): DAPPUDRAFT_260737
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Entry
DAPPUDRAFT_260737 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_260737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_260737
Spliceosome [BR:
dpx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
DAPPUDRAFT_260737
Complex C
U5 SnRNP specific factors
DAPPUDRAFT_260737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
EFX68018
JGI:
Dappu1_260737
UniProt:
E9HJS5
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MHDSKRVSRLSRMDADLYDEFGNYIGPELESDEDENEEGDEADHDDQAEDYGDNDSEEAM
DQTVVDGDAQMAIVLHEDKKYYPSALEVYGPGVETLVQEEDAQPLTEPIIAPVKRRKFQV
AEQELPETTYNMEFLADLMDSAELIRSVALVGHLHHGKTSFMDCLLMQTHPDLQTGKPGS
GEEKPVRYTDTLFTEQERGVSIKATPITVVMPDLNEKSFLLNMFDTPGHVNFSDEVTAAL
RLCDGIVLFVDAVEGVMLNTERILKHAVQEKMAITVCINKIDRLILELKLPPQDAYYKLR
YIIEEINGLLGLYSDEENPKFVSPLLGNVCFASAQFSVCFTLKSFAKLYSDTYGSDINDN
ELARRLWGDIYFNSKTRKFTKKPPHSSAQRSFIEFILEPLYKIFAQACIKDNFAVVGDLD
SSLPQLLDELGIRLTVEEQRLNTRPLLRLVCSRYLGTFSGFVEMCVKHVPSPVTAARTKV
EHIYTGPLESILGEDMVNCDPNGQLVVHTTKQYPTEDCTGFYVLGRVLSGTLHAHQSVRL
LGENYSLNDEEDSRVLTIGRLWIYEARYKIEVNRVTAGSWVLIEGIDASVVKTSTIVQVH
VDEDLYICRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVI
LGTGELYLDCVMHDLRKMYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIA
EPLEKGLAEDIENGVVQINWNKKKLSEFFQSKYDWDLLAARSIWAFGPDSTGPNILVDDT
LPSEVNKSLLNTVKDSIVQGFQWGTREGPLCEEPIRNAKFKILDAVIADEPVHRGGGQII
PTSRRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYSVLARRRGHVTQDAPVPGSPLY
IIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIILRPLEPQPATHL
AREFMVKTRRRKGLSEDVSINKFFDDPMLLELARQDVTLTYPF
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacagcaaacgagtcagtcgactgtcaagaatggacgccgatctctacgacgaa
ttcggcaattacattggacccgaactcgagtcagacgaagacgaaaatgaggaaggagac
gaggctgatcacgatgaccaagccgaagactatggtgacaatgattccgaagaggccatg
gatcaaacagtggttgatggcgacgcacagatggccattgttttgcatgaagacaaaaaa
tactatccatcagcgttggaggtttacggacctggtgtggagacactggtgcaggaagaa
gatgctcagcccttgactgaacccatcatcgcacctgtcaaacgaaggaagtttcaggtt
gctgagcaagaactccctgaaaccacgtacaacatggagtttctggctgatctcatggac
tctgcagaacttattcgttcagtggcccttgttggtcatttgcaccatggcaagacttcc
ttcatggattgtctgctcatgcaaacccacccagatctccagacgggtaaacctggcagt
ggagaggagaagcctgtcagatacacagacacactctttactgaacaagagagaggtgtt
tccatcaaagcgacgcccattacggtggtcatgcccgacctgaacgaaaaatccttcctc
ctcaacatgtttgacacacctggtcacgtcaacttctcagatgaagtcacggctgccctg
agactttgcgatggtatcgtcctctttgtcgacgctgtcgagggtgtcatgctcaacacg
gaacgaatcttgaagcacgccgtccaggagaaaatggccatcacagtttgcatcaacaaa
atcgatcgactcattttggagctcaagctaccacctcaggacgcatattacaagttgcgc
tacatcattgaagagatcaacggtcttttgggcctgtacagcgacgaagagaatccaaaa
ttcgtctcgcccttgttgggcaacgtctgctttgcttctgcccagttctccgtttgcttc
acccttaaatccttcgccaaactttacagtgacacatacggatccgatattaacgacaac
gagttggcacgtcgtctgtggggtgacatttacttcaacagcaagacgagaaagtttacc
aaaaagccgccacatagctcggctcagcgaagtttcatcgagttcattttagagccgttg
tacaaaatctttgcccaggcatgtatcaaggacaactttgcagttgtgggagatttggat
tcgagtctaccgcagttgctggacgaacttggcattcgcctgactgtcgaggaacagcgg
ttaaacactcgccccttgttgagactggtctgcagtcgctacctgggcactttcagcggt
ttcgtggaaatgtgcgtcaaacacgtcccgtcgccggtaacggctgctcgcaccaaagtg
gaacacatttacacaggtccactggagtccatcctgggcgaagacatggtcaactgtgat
cccaacggccaactggttgtccataccaccaaacagtatcccacagaggactgcactgga
ttctatgtcctgggtcgtgtcttgagtgggacccttcacgctcaccagagcgtccgactc
ctgggtgaaaactattcgctcaacgacgaagaagattcacgtgtgttgacgatcggccga
ctttggatatacgaggcccgttacaagatcgaggtcaatagagtgacggcaggcagttgg
gtcttgatcgaagggattgatgcctcagtggtcaagacgtcgaccatcgtccaggttcac
gtcgacgaggacttgtacatttgccgacccttgaaattcaacacgcaatccatcatcaaa
attgccgttgagccggtgaatcccagcgagttgcccaagatgttggacggcctgcgtaag
gtcaacaaatcttacccgttgctctcgacgcgagtggaggagtcgggcgagcacgttatt
cttggaacaggcgaactttacctggactgtgtcatgcacgatctcaggaaaatgtactcc
gaaatcgacattaaagttgctgatcctgtggtgtctttttgcgaaacggtcgtggaaacg
tcctcactgaaatgttttgccgaaactcccaacaaaaagaataaaatcacaatgattgcg
gaacccctggagaaaggtttggccgaagatattgaaaatggagtcgtccaaatcaattgg
aacaagaaaaaattgagcgagtttttccagagcaaatacgattgggatttgttggctgcc
cgatccatttgggcatttggccccgattccacgggacccaacatcctcgttgacgacaca
ctgccgtctgaagtcaataagagtttgctcaacacggtcaaagattccatcgttcaagga
ttccagtggggcacacgagaaggtcccttgtgcgaagaacccatcaggaacgcaaagttc
aagattctagacgccgtcattgccgacgaacccgttcacagaggaggaggtcaaatcatc
ccaacgtcgcgacgtgtcgcctattcagctttcctgatggccacgcctcgattaatggaa
ccctatctctttgtggaagtccaagcaccggctgactgcgtctctgctgtttacagcgtc
ttggccaggagaagaggtcacgtcactcaagacgcccccgttcccggctcacctctctac
atcattaaggctttcatacctgcgattgattcctttggcttcgagacagatttacgaacc
cacacccaaggacaggctttctgtctgtccgtctttcatcactggcagatcgttcccggc
gatccgctggacaagagcatcatcttgagaccgttggagccccaaccggcgacgcatttg
gctcgtgagtttatggtgaaaacgaggcgtcgtaagggtctgagtgaggacgtgtcgatc
aacaaattcttcgacgatcccatgttgctcgaattggccaggcaagacgtgacgttgact
tatccgttttga
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