Daphnia pulex (common water flea): DAPPUDRAFT_310202
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Entry
DAPPUDRAFT_310202 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K13138
integrator complex subunit 1
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_310202
Spliceosome [BR:
dpx03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
DAPPUDRAFT_310202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Motif
Other DBs
NCBI-ProteinID:
EFX89254
JGI:
Dappu1_310202
UniProt:
E9FST9
LinkDB
All DBs
Position
Unknown
AA seq
2126 aa
AA seq
DB search
MDRGKNLPPKNSKSKPLGFSGDFIALGPKQSRAEPVDAKKSGSSSGGPSKPTPAPLPSLG
PSDKKREAPSQLPGSSQNPAKKAKPGLPNTASFTALGRPALKAADPPSPSSTGNRLEPWE
EAAIEIEASELLNAIGEAESNEDEERIEAILCGSVKQLKAFSLSQRNKVEPILALALVYL
AKWRSHYFNTELIVEALLVLLKRDVTASIGPFKGRTTASAASLACNLLLAGLEDSTEWPE
SFLKVFVEDSVGERVWVDREECQGFVENILTAFNTKVPSRTILQQESATGTGLGSSGAAS
SPSITSLGTSGLEDDASVDSDNSQGGLLRGSTHLDQQQVRVIPRFQHLKDMAEALVMEIV
NQHLSRRQQPASDLTTRNFLKFLTSTAGLPAVRTQAAQRLEMWLSNQKLVRPATDLLLSI
CVNCSTEAPTDTDVLNALLRLRLKSKPLLQTYLTCFKELVEQQVDQLPLIVRLLIFNELS
PSRGPNNMAVLAVLVQPWPDRAATILADVFMELLLNRDDYLRALRALLREVVRALRHDLP
LTTFCAALLHGCMQERRKVAIREFEFKDRLLNSLADLTTLCIFLAISPGVRESASLVARG
DLREMEIFRQFHVQASAVQRESISWLRTSIPSVFEPNRVDYIHCLRKVLFMESGEHYYNK
DGWPLESDRPIMIRLASEIPVMEDSLIQILLIALSKDHPITASDALELADQLLRRCAAVH
NLGFLMLEADNQEIFDMVLRLTAYHYPENIVLPQGYTPPNLAISTLYWKAWLMLLMLIAH
NPGSLGSEAWNSFPTLRALMEMCITNDFATSSGTTDQTELQVAAIEKQTILEFETHLAAA
STKTVITENNSLLLSQLTSLDPRGSTRRPPPAVIEQLRTLNATLRLGHLLCRSRQPDFLL
EILHRQGAAQSKPWLADLVESNEGAWNVLPVQCLCEFLLHEAADDLPVNDLMDDSKQQLG
KRKERRHKHQQLVQHLRLLLTDPNQLPEACREVLDYLMRRLSAQKALARHQALTALSVVL
AVKDDDITMSDGACSEGTGDDSQFSWLVHQLPTIPHFEAVRPAVIAALRAAFLIETQTQA
VAAYLKFLSACALEEPIQDQADLSLDLAQVIVERSSLIAALLPSPSNKTLQAAKTLECLL
QLFWHYLLKAREPNKGSYTWSENQDQVLIQWQSGEAASLHIMVVHAIVSLLTYGAPQLEQ
QSTCFGRLLEIWFPASGVQPQAYLVETTEEAHLYPDWIKLRMIRSSVDPIVDTALKDLEP
AQMILFIQSFGFPVLSMSKLLQTLDRMVQDNPFAFVEVDIDKVYIQQLLQIQWARGARGG
LLFADIMQLVDTEIRSTADSKAFNMTLRPHLDISSHPSKISSASTASIVTVDHASAVLRQ
LFDIKTVIRISQLEKNKAYRNLSNALTREIRATTQPSTEACAISFDNLLASASVSRNEFE
LLLAALERQPAFSCGLLRILTSAASSPTASLGTGNIVAIVMNVCQKIAPVTPDGHSSLKS
IALQFVKSRGLLRSESTPADINTLNLSSKRLERHLQQLAARALETNDTRSLVKSIVSSLS
QSEFKASFVGLLVDWMELLDPEIITAQPDLEMRLLFGKTPNPPSCRPYALAMLVHQASWA
TLRKCIQKLLGARDIDAFEAKVVLDFLAALIKVPKLWQGRDKHVPKHQQPEELLNLNHQQ
LFRLAEYIMSEFVHQTQEKDRALHILQERSQLLLSCCGGSTKMEVLLARDVADLAGSAVK
SERQKAAQQLLLRLYVRAPHVITRLPKTSFAQFDDSKTLLTAVPCSIDSMALTLISSLTS
PQPGKEGARKMADYETALRKMAATHPLLLLRQFACLAAALRGRSHLDVFVLRSRNYMNVF
SSILGIAQQLSANLFTPDHREALEDMLKSFWCLFGNQRTVKESIGPLLQKFLQFLLDFVA
TAPFAASHCLQQHVPLLHDLQVTHPEMTAIKDLLSALSRPRPTDNEEDRQPSTVPTRSSI
RIGPILARLRQSDNYEEVVTVLQDLENVCGRVVCAPLEGAIADLRPLMSSSNQTVRNMTY
MLILRYLKDNPNASADLLPDYLDCLDNRNAAVVTTALERLPDFLLLCQENGDVLLQKTFN
LAVESGYNTLTNLSEAVMLLQHQMGT
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atggatcggggcaagaatttgccgcctaaaaactccaagtcaaaaccccttggattctct
ggtgattttattgctcttggaccaaagcaaagtcgagctgaaccagttgatgcaaagaaa
tcaggatcttcttcaggtggtccatcaaaacccactcctgctccacttccttctttgggt
ccttcagataaaaagcgggaagcaccaagccagctgccaggttcatctcaaaatccagct
aagaaagcaaagcctgggctcccaaatactgcatcctttactgcattgggaagacctgct
ttgaaggctgctgatcctcccagtccaagttctactgggaacagactagagccatgggaa
gaagctgctatagagattgaagcatcagagttgttgaatgctattggagaggctgaaagt
aacgaagatgaagaaagaattgaagcaatcctatgtggatcagttaagcaactgaaagcc
tttagtctgagtcaacggaataaagtggaacccattcttgcacttgcccttgtctactta
gctaaatggagatcacactatttcaacaccgaattgattgttgaagctttattggtatta
ctcaaacgagacgttaccgccagtattggtccttttaaaggaaggaccactgcttctgct
gcttcactggcttgcaatttgttgttagccggtctagaagattcaacggaatggccagag
tctttcttgaaagtttttgtcgaagattccgttggagaaagagtttgggtagatcgcgaa
gaatgtcaagggtttgtcgagaatatcctaactgcattcaacaccaaagtcccttcaagg
accatccttcaacaagaaagtgctactggcactggacttggatcttctggtgctgctagt
tctcctagtataacttctcttggcacctctggtcttgaagatgatgccagcgtggattca
gataacagtcaaggtgggctgcttcgaggttcaactcatctcgatcagcaacaggttcga
gttattcctcgatttcaacatctcaaagacatggcagaagcacttgtcatggaaatagta
aatcaacatttaagcaggcggcagcaaccggcatctgacctcactacaaggaacttctta
aagtttttgacatcaacagctggtttgcccgctgtaagaactcaagctgcccagcgattg
gaaatgtggctttccaatcaaaaacttgtgagaccagccaccgacctcctcctctcgatc
tgcgtcaattgcagtaccgaagctcctacagacacagatgttctaaatgctcttctacgt
ttgagattaaagagtaaaccgctgcttcagacatatctaacttgttttaaagaattggtc
gagcagcaggtggaccagcttccactcattgtgcggttgttaatattcaatgagctctcc
ccttctcgaggaccgaataacatggcagtactggctgttttggtccaaccgtggcctgat
cgtgctgccaccattttagcggacgtttttatggaacttctactcaatcgtgacgattac
cttcgggcactcagagcactattacgtgaagtggttcgcgctctccgccacgacttacct
ttaacgacattttgtgcagctcttttacacggttgtatgcaagagagacgcaaagttgca
atcagagaattcgaattcaaggatcggcttttgaattcattggcagacttgacgacttta
tgcattttccttgccataagtccaggtgtgcgtgaatcagcatctttggtcgcccgtgga
gatttgagagagatggaaattttccgacagtttcacgtccaagcatcggccgtccaaaga
gaatcgatcagctggttaagaacgtccatcccgtccgtgtttgagcccaatcgggtcgat
tatattcactgtctccgtaaagttttgtttatggagagtggagagcattattacaataaa
gacggttggccactcgagtcggatcgacccattatgataagattggcttctgaaattccc
gttatggaggattcattgatccaaatcctgctcattgctttgtcaaaggatcatccaatt
acggcttctgacgcattagaactggctgatcaattattaagacgatgtgcagcagttcat
aatctaggattccttatgctagaggctgataaccaagaaatttttgacatggttctccgc
ctcactgcttatcattatcctgaaaatatcgtcttgccacaaggatatactcctccaaat
ctggcaataagcacactttactggaaggcttggttgatgctattgatgctgattgctcat
aatccgggcagtcttgggtctgaggcatggaattcattccctacactccgagcattgatg
gagatgtgtatcacaaatgatttcgctacttcttctggtaccacagaccagacagagttg
caggtggctgcaattgaaaagcaaaccatcttggaattcgaaacacatctagcagccgcc
tctacaaaaactgttattaccgagaacaattctttgctgcttagtcaattgacatcgctt
gatccacgaggatctactcgacgacctcctccggctgttattgagcagcttcgaactttg
aacgcaacacttcgactgggtcacctactttgtcgaagtcgccaaccggactttttattg
gaaattctgcatagacaaggagctgcgcaatcgaagccatggctggctgatttggtcgag
tccaatgaaggtgcttggaacgttctgcctgttcaatgtctttgtgagtttttgctgcac
gaagcagctgatgatctgcctgttaatgatctaatggacgatagtaagcaacagcttggc
aaacgcaaggaacgtcgtcacaaacaccagcagttggtccagcatctaagacttttgttg
actgatcccaatcaactacccgaagcatgccgtgaagtcctagactatttgatgagacga
ttgagtgctcagaaagctctcgcccgtcaccaagccctcacggcattgagtgtggtcttg
gcagtaaaagacgatgatattaccatgagtgatggtgcatgctccgaaggaacaggagac
gattcccagttctcttggcttgttcatcagttacctaccatcccacatttcgaagccgta
cgccctgccgtgattgccgctctacgggccgcctttctcattgaaacacaaacacaagcc
gtggcggcgtatttgaagttcttatccgcctgcgctttggaagagccaattcaagaccaa
gctgatcttagcttggatcttgcccaggtaattgtagagcgtagcagtttaattgctgct
ctcttaccttcaccatcaaacaaaacgctgcaagcggcaaaaacgctggaatgtttgttg
caactcttttggcattaccttctcaaagcacgagaaccaaacaaaggatcctacacttgg
tcggagaatcaagaccaagttttgatacagtggcaatctggcgaagccgcttcccttcac
attatggttgttcacgccatagtgagtctgctgacttacggagcccctcagcttgagcaa
cagtcaacctgtttcggtcgactactagaaatttggtttcctgccagcggtgtacaaccc
caggcctatttagtcgagacgacagaggaagcccatctttatcctgactggatcaaactt
cgtatgattcgatcctctgtggatcctatagtcgatactgccttaaaggatttggagccg
gctcagatgatcctctttattcaatccttcggctttcctgttttgtctatgtctaagctt
ctgcaaactctggatcgaatggtgcaggataatccttttgccttcgtcgaggttgacata
gacaaagtttacatacagcagttactccagattcaatgggcgagaggagctcgaggtgga
ttgctttttgccgatatcatgcagttggtagataccgaaattcgttcgaccgccgacagc
aaggcgttcaatatgaccctgcgtcctcacctggacatttcatctcatccttctaagatc
agttcagcatccacagcctcaattgtaactgtcgatcatgcctctgcagtcctgcggcaa
ctttttgacataaaaactgtcattcggatcagtcagctggagaagaacaaggcctaccgg
aatttgagcaatgctttgactcgagaaattcgtgccaccactcagccgtccactgaagct
tgtgccatttcttttgataatctcttggcgtctgccagtgtatcacggaatgagtttgaa
cttttgctggcggctttagagcgccaacctgcgttctcgtgtggtttgctccgaatattg
acgtcagcagcatcttcaccaacggcttctcttggtactggaaatattgtggcgattgtg
atgaacgtttgtcagaagatagctccggtcactcctgatggacatagttcactgaaaagt
atcgctcttcaatttgtcaagtcccgcggactcctgagatctgaatcgaccccggccgat
atcaacacattgaacctgtcctccaagcggttggagcgtcacttgcagcaactggccgct
cgtgcactggaaacaaacgatactcgttcacttgtaaaaagtatcgtgagcagtttgagc
caaagtgagtttaaggcgagcttcgttggccttttggtcgactggatggagttgctggat
cccgaaattattacagcccagcctgatttagagatgcggttgttgtttggtaaaacgcct
aacccaccatcttgtcgtccgtatgccctcgcaatgctggtgcatcaggccagttgggct
acgctgcgcaaatgtattcagaaactactgggcgctcgcgatatcgacgcttttgaggct
aaggtcgttctggactttctagctgctttgatcaaagttcccaagctgtggcagggtagg
gacaagcacgttcccaagcatcagcagccggaagagctgcttaacctaaatcatcagcag
ctgtttcgactggccgaatatattatgagcgagtttgtacatcagactcaggaaaaggat
cgcgcactacacatccttcaagagcggagtcaattgctactctcatgttgtggaggttcc
accaaaatggaagtgttattagctcgtgatgttgcagaccttgcaggtagtgcggtaaag
agcgagagacagaaagcagcccaacaattacttctacgactttacgttcgggctccacat
gtcataacgagactccccaagacgtcgtttgcccagtttgacgacagcaaaaccctactg
acggccgtgccttgctccatcgattcaatggccctgacgcttatttcttcccttacgtct
cctcagccgggcaaagaaggcgccagaaaaatggcagactacgagactgccctccgcaaa
atggctgccactcatccacttctgcttttaaggcaatttgcttgcctcgctgccgccctt
cgaggacgctctcacctggacgtgtttgtcttgcgttcacgcaactatatgaatgttttc
tcttctattcttggaatcgcccaacaactcagcgccaaccttttcacccctgatcatcgc
gaggccctcgaggacatgctcaaatcattttggtgtctttttggcaaccagcgaacggtg
aaagaatcaatcggcccactacttcagaaattcctgcagtttttattggattttgtggcg
acagctccgttcgccgcgtcacactgtctccaacaacatgtgcctttattgcacgatctc
caggtgacccatccagagatgacggctataaaggacctcttgtcggcgctatcgcgaccc
cgacccactgataacgaggaggaccgccagccctcaacggtcccaacccgctccagcatc
cgaataggtcctattctggcaagattgcgccaatctgataattacgaagaagtggtgacg
gttctccaagacttggagaacgtttgcggtcgagttgtttgcgctccgctggaaggggcc
attgccgatcttcgccctctcatgtcgtcatctaaccaaacggtccgcaacatgacgtac
atgctcatcttgcgctatctaaaggacaatcctaatgcatccgctgatctactgccggat
tatttggactgcctggataatcggaatgctgccgtcgtaacaacagctctggaaagattg
ccagattttctcctcctatgccaagaaaatggcgatgttttacttcagaaaacgttcaac
ttggcggtcgagagcggatacaatacattgaccaatctaagcgaggccgttatgctcctg
caacatcagatgggcacgtga
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integrated database retrieval system
