KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_65509
Entry
DAPPUDRAFT_65509  CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03420  Nucleotide excision repair
dpx04120  Ubiquitin mediated proteolysis
dpx04141  Protein processing in endoplasmic reticulum
dpx04310  Wnt signaling pathway
dpx04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    DAPPUDRAFT_65509
   04120 Ubiquitin mediated proteolysis
    DAPPUDRAFT_65509
  09124 Replication and repair
   03420 Nucleotide excision repair
    DAPPUDRAFT_65509
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    DAPPUDRAFT_65509
   04350 TGF-beta signaling pathway
    DAPPUDRAFT_65509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dpx04121]
    DAPPUDRAFT_65509
   03400 DNA repair and recombination proteins [BR:dpx03400]
    DAPPUDRAFT_65509
Enzymes [BR:dpx01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     DAPPUDRAFT_65509
Ubiquitin system [BR:dpx04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   DAPPUDRAFT_65509
  Multi subunit type E3
   SCF complex
    Ring finger protein
     DAPPUDRAFT_65509
   Cul2 complex
     DAPPUDRAFT_65509
   Cul3 complex
     DAPPUDRAFT_65509
   Cul4 complex
     DAPPUDRAFT_65509
   Cul7 complex
     DAPPUDRAFT_65509
   Cul8 complex
     DAPPUDRAFT_65509
   Cul9 complex
     DAPPUDRAFT_65509
DNA repair and recombination proteins [BR:dpx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      DAPPUDRAFT_65509
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      DAPPUDRAFT_65509
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 PHD_NSD zf-RING_2 zf-C3HC4_2
Other DBs
NCBI-ProteinID: EFX65402
JGI: Dappu1_65509
UniProt: E9HS84
LinkDB
Position
Unknown
AA seq 114 aa
MDVEDKEAEQPSSSNVKSDNRKRIEVKRWNAVALWTWDIVVENCAICRNHIMDLCIACQA
NQASGTGEHAVEECTIAWGVCNHAFHLHCISRLLTTRHVCPLDNREWEFQKCGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atggatgtcgaagacaaagaagcagaacagccttcatcatctaatgtgaagagtgacaat
agaaaacgtattgaagtgaagaggtggaatgcagttgctttgtggacttgggatattgtt
gtcgaaaactgtgctatctgtcgtaatcacattatggacctctgtattgcatgtcaagcc
aatcaggcttcaggtactggtgaacatgctgttgaagaatgcacaattgcctggggtgtc
tgcaatcatgccttccacttacattgcatttctcgcttgctgacgactcgtcatgtatgc
ccactggataatcgcgaatgggaattccaaaaatgtggacgttaa

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