Daphnia pulicaria: 124316118
Help
Entry
124316118 CDS
T08670
Name
(RefSeq) lysosomal-trafficking regulator-like
KO
K22937
lysosomal-trafficking regulator
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124316118
Membrane trafficking [BR:
dpz04131
]
Endosome - Lysosome transport
Others
Others
124316118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
PH_BEACH
WD40_WDHD1_1st
WD40
NBCH_WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_SCAP
DUF5516
Motif
Other DBs
NCBI-GeneID:
124316118
NCBI-ProteinID:
XP_046637805
LinkDB
All DBs
Position
12:complement(2163715..2174904)
Genome browser
AA seq
3173 aa
AA seq
DB search
MKEMDKRLYVAWNNFAKHELCCPKRCQWLDVFLYLALKHQEFRFPQFFRGMSSILIEQLL
YDISRISNSVLGGEKEKLTYCLRGRGWLLLHALSSSNLRSLVGVADLADLLINLYGIQSE
NEPPSSQSLALWPMTDLSTVVTRADLKNVKKPRQKYSRRSGRLDDIKITSSRDSVDGVVK
IELSDRCCRPDDDDVDEEGEWVDKKELPCLSAKSFNHLALSLLEQLVGHHGECRLKSSRC
LDHRVMTFALHRLQPGMHCEEQRRLFRLILRCMVSIVQHRRPLQGEEVIHQLTEIAAASQ
PSFAADVVEGLIRFLASVHPIEDDVQFHQWLNNFHSQSCMQLIVSLTKSESRDISWIPLI
GTIIGNVSGRNSKTPFHHHHVFGQALIDPDQLGRESCSISSLFYILLQVYQTSNENVQKL
VLTAINSGGHPCCCLPPDIIYQVLFERVLESPEFLNVLEVIFRSTGFSSAPVSMIDYQCH
FCRYNGGQELERCRRMGVYASTESLSKSCWNMVLPDPWRSFDFYTDYVLTRMDQPFTLSM
VKHIHQLIEVGTTQVKSEIFARVFYPILTLPTSFGTASPSDRSSIAGQITEACWQMTANL
VRQRSICELFLSSNGLELLLDLCRSPEWSWNVARVLQSMIGIQCQSNDEVDLIENVDIKL
TGMGEATALAILEHLLVHHMSYILRSLESQAPSTDNWDIEIPELKEATDTVGLFDSVWVN
HLKTFDHLPGNLKTASALWETTARLFVHNRAFSSWFSNHSFVKWIELILPALCRYLSNPL
APHWTLYADLLELFLALSLLSASSNAEHRLKSILEHFAPQRNLSNVYELLLRCSTLERWI
NPENSARSRESISPRDGTQSDGYEADEEPVTLEPSAPNQRSNYLFFPTIFPQLLLNFSNW
QSETTDNEERVLLFQDFLTAFKRMASICSHPPTAIVLSNQGLLTILLKELKPILICSDSS
GIRQQVVWMISCLGSQRITPGELQLLVDMLKEDNPPWKDLLPVFLNLIQTDGYRPTHTLS
FPSRKVIDDDEENSLHLSSGSIESFIQLNDIRSEIFTLTKHAMELGRLHESKGIGSAWKC
AAIFLPILTDNNWNMQTDGLSLSTWLLLSEAPRRKSPRFSNPEWRPDLQDCTASFPWEDP
TCGRDLHLFSMGTRSFLVEFWADPAADNTLLVRLSQSTHSQSQALATQTLDLKIPSGRWN
HLAVSCRQRSSANGYHRVVHIQVFLNGYQSTSLDLKVPLSPMKRIGNSHSFLLLGIAAVS
KAKKILTPSWQLGNATLYKGELLSAELALLLMALGPNGGMFLATCQDGITRPNFPRFLHS
KLVDHLQEWDRLLDWEKLMDTLQSNLLMTYSAHKPESVFIYPYIISPTAGIFGSIMPSGC
VFNAISSDPRSSQQPPIALSVAVAAPLTAQYHMGIHAAMKQLGGYPVLLFLLGYAIESKT
DYQAQALEILLYWLRSDAQEAQLFAAKRGYWMLQHVFEADRCRPGKDFAAVLLNLSCSSP
VVTKNPSHHCDAIIVDPHLLSFTVQCWKHWQRYRDSTEGNTLDVVLHTLQHLLRDNHRYR
DFNVKQMERAGILELVLHLARESSLYEDCIPLTEHQAIVTADLVEGLIGSPPTLNNLMVV
VDYLLLLHPAEQTYCPTNSAGFSYYFLLTARDPSFNVFQSRNWKLPEGYETFAPESSIPQ
PMNANQLGSALRDVIVKWSDGNEKVEENISNNQTVAGLPEVSSSSNLSTCTRAEADTTLS
LHLLRVLLACIRVLPDSMVKQVANSIIRPDTLVVLARHKRDKMRAGAIRLLQAILNRSEE
EEQNFIKQLGLLLLANQLQPYAATTPVVEACVGLCVGVDVILEQVLDPFAIWPENPTPLQ
LQSTVLLLSLLPNAALDPALFHQLATLIRTLATRSNQILKFLLDLGLVETMGKSIVALAH
ATKNHPGDILEQREDEILLEAIHRILILIATRTVGASGIAPWSVFQDMIQLFHYMERVES
GRCGFKSRCVRMLHESCCVVLKQAIQAIQHRVEFHKIGRQQHQLFAFQPGTSHFQHVSDK
VLNIVLPVPLNRKMKLDKPPSQSEILERFKFTLAKAVDHITLNVEQNTSSVEIAFSQDLL
VTLVRGVSSILERPKSNGFRHLSNDALTDWSHYYAPDSNDLVRTLFWNSRQTIKTQLNRL
VLFLSSPIQLPTMLQFVIKTLYDDPHHEEIFKLIPPDESDFPFTLDTYLCHFLHSRKFAD
NVEHSTLIRIHCISRCLVPSYQRRRCQILDPALLREQFELDRSSWWRMQEETQTRILSRF
DPVVRMTSDLAAKWTTMAVESQNNIRRIFLSRLRCDHGSKVLAAGGWTELVDQMTHQRAA
WHLASSYLRGWQLDPTEGYQRMHLRLKRSALNVDAKYLLERSRCLLQPERLPQPLESILR
MSTIKSIDDAIVHEDEKILRTINCWLVTTTEEIMGELIFTGKWMTFLSPESEKSFSCIKY
DDVREILTRRFQLQERALELFLCDSSTQFLVFNSFEERNCTHRELNELCLKLIPSESLAE
VTQLWRESQITNFEYLVFLNKFAGRSYNDLMQYPIFPFVLADYESPVLDLDDPHVYRNFK
KPMAVQNETRDQHYIENYNYLKRDFENRPEGSGPNFGPFHYGSLYSNPGIVLHFLVRLPP
FTKLLMEYQDRNFDVPDRSFHSVGTSWRLASSDSTTDVKELIPEFFYLPEFLVNALGFDF
GMQQSGDPVDDVQLPPWSLGKPRLFIQIHRQALESSWVRDHLHHWIDLIFGFKQTGPSAI
ESINVFHPSTYAGFDTTEGLNDDPIERNAKLTMIRSYGQVPRQLFRQPHPMSVQPLNAKS
IRRSRNLLPSVDHLQWGCYVGSPSCQAPVLKHKESFAIPVHSFLPLRTGDTYALGPFTTA
ILSHSYDKDSFLGRPTGILGVALISWGQSDGIVRIKIRKDEPVKPLFQSEAHDSVILCST
LPDYNRIWVAYRSGIMRVYPFLFDPLKPHFELTGPPTVLSGHVGPLQQLVLCSSFSLAVS
SGSDGSIILWDLHSLNFIRQLTPGLSNDRKDIILPVSQLAVSRNTADIACAVNLDDQQSR
LELRSVNGHLIGMTTTNPLITSLCFSSAPEGISINVVAAGLSNGRIRLWDTWTLNVVRDI
ITDSSLSIVSLTYSSTSQHLLAARNDGSLLAWDSPHNHKKSPRFPPFINLTLQ
NT seq
9522 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatggacaaacgattgtacgtcgcctggaataatttcgccaagcacgagctg
tgctgccccaaacgctgccaatggctcgatgtcttcttatatctggcgctgaaacaccaa
gaattccgctttcctcaatttttccgtggcatgtccagcattttgattgaacagctgttg
tatgacatcagccggattagcaactcagtgctgggtggagaaaaggagaaattaacctac
tgtctacgaggcagaggatggcttctcttgcacgccttatcctcctccaatttaaggagt
ttagtaggagttgccgatttggcagatcttttgattaatctgtacggaatccaatcagaa
aatgagccaccttctagtcaatctctggctctttggccaatgacagatcttagcacagtc
gtcactcgtgcagacctcaagaacgtgaaaaagccacgacaaaaatattccaggcgttct
ggtcggttggatgacatcaaaatcaccagttccagggattccgtcgacggagtggtcaag
attgagttgtcggaccgttgctgccgcccagacgacgacgatgtagatgaggaaggcgaa
tgggttgacaagaaagagctcccgtgtttatccgcgaaatcgttcaaccacttggcgctg
tcacttttggaacaactggtcggacatcacggagaatgtcgcctgaaatcatctcgctgc
ttagatcaccgagtcatgacctttgccttgcatcgtttacaacccgggatgcattgcgaa
gagcagaggaggctgtttcgtttgattctccgttgtatggtctccatcgttcagcaccgt
agaccattgcagggcgaagaagttatccatcagttgactgaaatagcagccgcaagtcaa
cccagttttgctgctgacgtggttgagggcctcatacgttttctagcttctgttcatcct
atcgaagacgacgttcagtttcaccagtggctcaataacttccatagccaatcttgcatg
caattgattgtcagtctaacgaaatcggaatctcgagatatttcctggatcccactgatt
ggaaccatcatcggcaacgtttccggtcgaaattcaaaaactcctttccatcatcaccac
gtatttggacaggcactgatcgatcctgatcaacttggtcgcgaatcgtgctccatctct
tcccttttctacattctcctgcaagtgtatcaaacgtcgaatgaaaatgtccagaaactg
gtcctcaccgccatcaattctggaggacatccatgttgttgccttccaccggatattatc
taccaggtcttgtttgaacgagtactagagtcgcctgaattcctcaatgtgctggaggtg
attttccgcagcacaggtttctcatccgcccccgtttccatgatcgattaccagtgtcac
ttttgccgctacaatggcggacaagaactggaacggtgtcgtcgaatgggtgtctacgcc
tctactgaatctctcagcaagtcctgctggaacatggtcttacccgatccttggcgttcg
ttcgatttctacactgattatgttttgacacgcatggaccaacctttcacgctgtccatg
gtgaagcatatccatcaactgattgaagttggaacgactcaagtcaaatcagaaatattc
gcccgcgtattttatccgatcctgactctgccgacttcttttggaactgccagcccatcc
gatcgctcctcaatagccggacagatcactgaagcttgctggcaaatgacggccaattta
gtccgccaaaggagtatatgtgaattgttcctcagttccaatggattagaactgctgctg
gatttgtgccgatcacccgaatggtcctggaacgtcgctcgagtcctccagtcgatgatt
ggcatccagtgccagtccaacgatgaagttgatctcattgaaaacgtcgacatcaaacta
actgggatgggcgaggctacggcactggcgattttagaacacttgctggtgcatcacatg
tcctacatcttgcgcagcttagaaagtcaagcgccgtcgaccgacaattgggatattgaa
atccccgaactcaaggaagcgaccgacactgttggattatttgattccgtctgggtgaat
catttaaagacgtttgatcatttacctggaaatctcaaaaccgcgtccgccttatgggaa
acgactgcccggctgtttgttcacaaccgagccttctcttcgtggtttagtaatcattct
tttgtcaaatggatcgaactcattcttcccgctctctgccgatacttgtccaatcccctt
gcgccgcattggacgttgtacgctgatcttctggaactcttcctcgccttatctctgctc
tctgcttcttccaatgctgagcatcgattgaaaagtatcttggaacattttgctccgcaa
cggaacctgtcaaacgtgtacgaattgctgctgcgttgctccactttagagcgctggatc
aatcccgagaactccgcccgttctagagaatcgatttcgccgagagacggaactcagtcg
gacggttacgaggcggatgaagaacccgttacgttggaaccttctgctccgaaccaaaga
tcgaattatcttttctttccgactattttcccgcaattgttgctcaatttttcaaactgg
caatcggaaaccacggataatgaggaaagagttttgctgttccaggattttctgactgcc
ttcaagcgaatggcatccatctgctctcatccgcccacagccatcgttctgagtaatcag
gggttgttgacgattctcctgaaagaattgaaaccgatcctgatctgttccgactcgtct
ggtatccgccaacaagtcgtatggatgatcagttgccttggcagccaaagaattacgccc
ggtgaattgcaactgctggtcgatatgttgaaagaagacaatccaccttggaaagatctc
cttcccgtgttcctgaacctgatccagacagatggctacagacctactcacactttaagt
tttcccagccgaaaagtgatcgatgatgacgaagaaaattccctgcacctaagtagcggc
tctatcgaatcttttattcaactgaacgatatccgctcagaaattttcactttgacgaaa
catgccatggaacttggacgtctacatgaaagcaaaggaattggatcagcctggaaatgc
gctgcaatattcctacctattttgacagataataattggaacatgcaaacggacgggtta
tcactttcaacatggcttctattgtcggaagcccctcgtcggaagagtccgagattttcc
aatccggaatggaggccggaccttcaagattgcactgcaagttttccgtgggaggacccg
acttgtgggcgtgatttacatcttttctcaatgggcaccaggagcttccttgttgaattt
tgggctgatcctgccgcagacaacacgctacttgtccgtctcagccagtccacccactct
caaagccaggcgctagccacacaaactttggatttgaaaatcccttctggcaggtggaat
catttggccgttagctgtcgtcaaaggtcttccgcaaacggctaccaccgagtggtacac
attcaagtgtttttaaacggataccaatcgaccagtctagatctgaaagtgccactcagt
ccgatgaaacggataggcaactctcattcgttcctgttactcggaatcgctgccgtgtca
aaagccaaaaagatattgactccatcgtggcaacttggaaatgctaccctctacaaaggc
gaactgctttcggccgaattagctcttctgttgatggccctgggtccaaacggcggcatg
tttctcgctacctgtcaagatggcataacaagacccaactttcctcgtttccttcactca
aaattagttgaccatctgcaagaatgggaccgacttttagattgggaaaagttaatggat
actttacagtctaatctgttgatgacgtattcggctcacaagcccgaatctgtgtttatt
tatccctacataatatcaccaaccgcaggaatctttggttcaattatgccaagtgggtgt
gtctttaacgccatttcaagcgatcctcgtagcagtcaacaaccaccgatcgctctttcg
gttgcagtggccgcgcctttaacggcccagtatcacatgggcattcacgctgcaatgaag
caacttggaggctacccagttttgctctttcttttgggctatgccatcgaatcgaagaca
gattaccaagctcaagcgttggagattttgttgtattggctacgctcggacgcccaggag
gcccaactgtttgcagccaaacgcggttactggatgctccagcatgtttttgaagctgat
agatgtcggccgggaaaagactttgcggccgtccttttgaatctcagctgttctagtccg
gtggtcaccaaaaatcctagtcatcattgcgatgccattatagttgatcctcatcttctc
tccttcaccgttcaatgctggaagcactggcagagataccgcgattccaccgaaggaaat
acgctcgacgtggtgttgcataccctccaacatcttttacgtgacaatcatcgctatcga
gatttcaacgtcaaacaaatggaacgagctggaatattggaacttgtactccatttggct
agagagtcttctctctatgaagactgcattcctttgacagaacatcaagccatcgtgacg
gcagatttggtagaaggattgattggatctcccccgactctcaataatttgatggtcgtc
gtcgattacttgctcttgcttcacccagccgaacagacttattgccctactaactcggca
ggtttttcctactatttcctgctcaccgctagagatcctagtttcaatgttttccaatcg
agaaactggaaattaccagaaggatacgaaactttcgccccggaatcttccattccgcag
cctatgaatgccaatcaacttggttcagcccttcgtgatgtcattgtaaagtggtcggat
ggaaatgaaaaagttgaagaaaacatctctaataatcagactgtcgcgggcctaccggaa
gtaagcagttccagcaatttgagtacttgcaccagagctgaggcggatacgactctaagt
cttcacctcctgcgagtcttgcttgcttgcatccgcgttcttcctgattcaatggtcaag
caagtcgctaacagcatcattcgaccggatactttggtggtgttggcgcgacacaaacgc
gataaaatgcgagccggagccatccggctattgcaagcgattctcaaccggagcgaagaa
gaagagcagaatttcattaagcagctgggactgcttcttttggccaaccaattgcaaccc
tatgcggccacaaccccagtggtagaagcctgtgtgggactttgcgttggcgtcgacgtc
attcttgaacaagttttagatccattcgccatctggccagagaatccgacaccccttcaa
ctgcagtcaaccgtccttctgttgagcttgctgccaaacgctgctctcgatccagctctc
tttcatcagctggccacactgattcgaaccctagctactagatccaatcaaattctcaag
ttcttgttagaccttggtctagtcgagaccatgggcaagtccatagtcgccttggcacac
gccacaaaaaaccacccgggcgatattctagaacagcgcgaagatgaaatactcttggaa
gccatacacaggatacttatactcatcgccacccggactgttggtgcttctgggattgct
ccatggtcagtgttccaggatatgatacagttgtttcactacatggaacgagtagaaagt
ggtcgttgcggattcaaatcacgctgcgttcgaatgctgcatgaaagctgttgcgtcgtc
ctgaaacaagccatccaggcgatccagcatcgagtggaattccacaaaatcggcaggcag
cagcaccagctctttgcctttcaacctgggacatctcattttcagcacgtttccgacaag
gttctgaatattgtgcttccggtcccactcaaccgcaaaatgaaattggataagccacca
agtcaatcggaaatcctagaaagatttaaattcactctagccaaagcagttgaccacatt
accctcaatgtggagcaaaacacttcctctgtagaaatagccttcagtcaagacttgctg
gtaactttggtgcggggtgtatcatctatcctggagcggccgaaatccaacggcttccgc
cacctatctaacgatgccttaacagattggtcacactactacgcgccggactcgaacgat
ctcgtccgcaccctcttctggaacagtcgacaaacgataaagactcaactgaatcgattg
gttctcttcttatcaagccccatccagcttccgactatgctccagtttgtaatcaaaaca
ctctacgacgatcctcaccacgaagaaatcttcaaactgattccaccggacgaatccgat
ttcccgttcactttggacacatacctctgtcattttctgcactcgcgaaagtttgccgac
aacgttgaacacagcacattgattagaattcattgcatcagtcgttgtttggtaccgtcg
taccagcgtcgaagatgtcagatacttgatccagccctgttgagggagcagtttgaattg
gaccgcagtagttggtggagaatgcaagaagaaactcaaacccgcattctttcgcggttc
gatccggtggtcaggatgacgtcagatcttgcagccaagtggacaacgatggcggttgag
tcgcaaaacaacattcgccgcattttcctgagccgtttgcggtgtgatcatggttccaaa
gtattagctgccggaggctggaccgagttggtcgatcaaatgacccaccagagagcagct
tggcatttagcaagttcgtaccttcgcggatggcagctagatccgaccgaaggatatcaa
cgaatgcacctccgtttaaaacgatccgccctgaacgtcgatgccaaatatcttttagag
cgttcccgttgtctactacaaccagaaagactacctcaaccgttagaatccatcttgcga
atgtccacaatcaaatcgattgacgacgccatcgtccatgaagacgagaaaatcctacgg
accatcaactgttggctcgtcacgacgaccgaggaaataatgggcgaacttatttttact
ggaaagtggatgactttcttgtctccagagtctgagaaatcattttcctgcatcaagtac
gacgatgtcagagagatattgacgcgtcgttttcagcttcaagagcgagccttagaactc
ttcctatgcgatagtagtacgcaatttttggtattcaacagctttgaggaacgcaactgc
acccaccgcgagctgaatgagctgtgcctcaaactgattccttccgagagtctagccgaa
gtgacgcaattgtggcgggagagtcaaatcaccaattttgagtatctggtctttcttaac
aaatttgctggacgatcttataatgatttgatgcagtacccgattttcccatttgttctg
gctgactacgagtcaccggtattggatctggatgatccccatgtttatcgaaacttcaag
aaacccatggccgtccagaatgagactcgtgatcagcattacattgaaaactacaactac
ctcaaaagggactttgaaaatagaccggaaggttcagggccgaattttggaccatttcat
tatgggtctctgtattccaacccgggtatagtccttcattttctcgtccggctgccgcct
ttcaccaagctattgatggaatatcaggacagaaactttgatgtgcctgatcggtcgttt
cattcagtcggaacatcttggcgtttggccagttccgattcaacaactgacgtcaaagaa
ttgatcccagaatttttttatttacccgaatttctagtcaacgctcttggtttcgatttc
ggaatgcaacaatccggtgatcctgttgacgatgttcagcttccaccttggagtctgggg
aagccccgccttttcattcaaatccatcgacaggctttagagtccagctgggtccgagac
catctccatcattggatcgatttgatctttggcttcaaacagactggaccatctgcgata
gagtccattaacgttttccatccgtccacttacgccggatttgatactacagaaggactc
aatgacgatccgattgaacggaatgcgaagctcactatgattcgatcatacggtcaagtg
cctcgccaactcttccgccagccgcatcctatgagcgtccagcccctcaacgctaaatcc
attcgccggagtcgcaatctcttgccttctgttgatcacctccaatggggctgttatgtg
ggctcgccgtcctgtcaggctcctgtattgaaacataaagaatcttttgctattccagtc
cattccttcctcccgttgcgaactggagatacttacgctctgggccctttcaccaccgcc
attctatcacattcgtacgacaaggattcgttccttggccgaccgacaggcattctaggg
gtggcattgatctcttggggtcaatcggacggaattgtaagaatcaaaatccggaaggac
gaacctgtgaaacctctctttcaatcggaagcgcacgatagcgtgattttatgctcaact
ttgccggattacaacaggatctgggttgcctatcgatctggaatcatgcgggtctatcct
tttctgtttgacccactgaaaccccattttgagttgactggaccgccgacagttctctct
ggtcatgttggaccccttcaacagctcgtcttgtgttcgtcgttcagcctcgctgtctcc
agtggaagtgatggatcaattatcctctgggatcttcattctttgaattttatccgtcag
ctcactccaggtctatcaaatgaccggaaagatataatactaccagtttctcaattggcc
gtcagtcgtaatacagctgatattgcatgcgctgtcaatctggacgatcagcagtctcgg
ctggaattgaggtcagtcaatgggcatttgatcggcatgacaacgacgaatcctctcatt
acttcgttgtgtttctcatctgctcccgagggaatttctatcaatgtggtagctgccggg
ctatccaatggtcgcattagattgtgggatacttggaccctaaatgtcgtacgagatatc
atcactgactcctccttgtcgatagtcagtttgacatattcaagcacttcacagcattta
ctagccgctagaaacgatggttctctgctagcttgggatagtccacataaccacaaaaaa
tcgcctcgcttcccaccctttatcaatttaactttgcaatga
DBGET
integrated database retrieval system
