Daphnia pulicaria: 124331082
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Entry
124331082 CDS
T08670
Name
(RefSeq) integrator complex subunit 1-like isoform X1
KO
K13138
integrator complex subunit 1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124331082
Spliceosome [BR:
dpz03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124331082
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
124331082
NCBI-ProteinID:
XP_046644727
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All DBs
Position
1:12391411..12399692
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AA seq
2126 aa
AA seq
DB search
MDRGKNLPPKNSKSKPLGFSGDFIALGPKQSRAEPVDAKKSGSSSGGPSKPTPAPLPSLG
PSDKKREAPSQLPGSSQNPAKKAKPGLPNTASFTALGRPALKAADPPSPSSTGNRLEPWE
EAAIEIEASELLNAIGEAESNEDEERIEAILCGSVKQLKAFSLSQRNKVEPILALALVYL
AKWRSHYFNTELIVEALLVLLKRDVTASIGPFKGRTTASTASLACNLLLAGLEDSTEWPE
SFLKVFVEDSVGERVWVDREECQGFVENILTAFNTKVPSRNILQQESATGTVLGSSGAAS
SPSITSLGTTGLEDDASVDSDNSQGGLLRGSTHLDQQQVRVIHRFQHLKDMAEALVMEIV
NQHFSRRQQPASDLTTRNFLKFLTSTAGLPAVRTQAAQRLEMWLSNQKLVRPATDLLLSI
CVNCSTEAPTDTDVLNALLRLRLKSKPLLQTYLTCFKELVEQQADQLPLIVRLLIFNELS
PSRGPNNMAVLAVLVQPWPDRAATILADVFMELLLNRDDYLRALRALLREVVRALRHDLP
LPTFCAALLHGCMQERRKVAIREFEFKDRLLNSLADLTTLCIFLAISPGVRESASLVARG
DLREMELFRQFHVQASAVQRESISCLRTSIPSVFEPNRVDYIHCLRKVLFMESGEHYYNK
DGWPLESDRPIMIRLASEIPVMEDSLIQILLIGLSKDHPITAPDALELADQLLRRCAAVH
NLGFLMLEADNQEIFDMVLRLTAYHYPENIVLPQGYTPPNLAISTLYWKAWLMLLMLIAH
NPGSLGSEAWNSFPTLRALMEMCITNDFATSSGTTDQTELQVAAIEKQTILEFETHLAAA
STKTVITENNSLLLSQLTSLDPRGSTRRPPPAVIEQLRTLNATLRLGHLLCRSRQPDFLL
EILHRQGAAQSKPWLADLVESNEGAWNVLPVQCLCEFLLHEAADDLPVNDLMDDSKQQLG
KRKERRHKHQQLVQHLRLLLTDPNQLPEACREVLDYLMRRLSAQKALARHQALTALSVVL
AVKDDDITMSDGACFEGTGDDSQFSWLVHQLPTIPHFEAVRPAVIAALRAAFLIETQPLA
VAAYLRFLSTCALEEPIQDQADLSLDLAQVIVERSSLIAALLPSPSNKTLQAAKTLECLL
QLFWHYLLKAREPNKGSYTWSENQDQVLIQWQSGEAASLHIMVVHAIVSLLTYGAPQLEQ
QSTCFGRLLEIWFPASGVQPQAYLVETTEEAHLYPDWIKLRMIRSSVDPIVDTALKDLEP
AQMILFIQSFGFPVLSMSKLLQTLDRMVQDNPFAFVEVDIDKVYIQQLLQIQWARGARGG
LLFADIMQLVDTEIGSTADSKAFNLTLRPHLDISSHPSKISSASTSSIVTVDHASAVLRQ
LFDIKTVIRISQLEKNKAYRSLSNALTREIRANTQPSTEACAIAFDNLLASASVSKNEFE
LLLAALERQPAFSCGLLRLLTSAASSPAASLGTGNIVVIVMNICQKIAPVTPDGHSSLKS
IALQFVKSRGLLRSESTPADINTLNLSSKRLERHLQQLAARALETNDTRSLVKSIVSSLS
QSGFKASFVGLLVDWMELLDPEIITAQPDLEMRLLFGKTPNPPSCRPYALAMLVHQASWA
TLRKCIQKLLGARDIDAFEAKVVLDFLAALIKVPKLWQGRDKHVPKHQQPEELLNLNHQQ
LFRLAEYIMSEFVHQTQEKDRALHILQERSQLLLSCCGGSTKMEVLLARDVADLAGSAVK
SERQKAAQQLLLRLYVRAPHVITRLPKTSFAQFDDSKTLLTAVPCSIDSMALTLISSLTS
PQPGKEGARKMADYETALRKMAATHPLLLLRQFACLAAALRGRSHLDVFVLRSRNYMNVF
SSILGIAQQLSANLFTPDHREALEDMLKSFWCLFGNQRTVKESIGPLLQKFLQFLLDFVA
TAPFAASHCLQQHVPLLHDLQVTHPEMTAIKDLLSALSRPRPTDNEEDRQPSTVPTRPSI
RIGPILARLRQSDNYEEVVTVLQDLENVCGRVVCAPLEGAIADLRPLMSSSNQTVRNMTY
MLILRYLKDNPNASSDLLPDYLDCLDNRNAAVVTTALERLPDFLLLCQENGDVLLQKTFN
LAVESGYNTLTNLSEAVMLLQHQMGT
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atggatcggggcaagaatttgccgcctaaaaactccaagtcaaaaccccttggattctct
ggtgattttattgctcttggaccaaagcaaagtcgagctgaaccagttgatgcaaagaaa
tcaggatcttcttcaggtggtccatcaaaacccactcctgctccacttccttctttgggt
ccttcagataaaaagcgggaagcaccaagccagctgccaggttcatctcaaaatccagct
aagaaagcaaagcctgggctcccaaatactgcatcctttactgcattgggaagacctgct
ttgaaggctgctgatcctcccagtccaagttcaactgggaacagactagagccatgggaa
gaagctgctatagagattgaagcatcagagttgttgaatgctattggagaggctgagagt
aacgaagatgaagaaagaattgaagcaatcctatgtggatcagttaagcaactgaaagcc
tttagtctgagtcaacggaataaagtggaacccattcttgcgcttgcccttgtctactta
gctaaatggagatcgcactatttcaacaccgaattgattgttgaagctttattggtatta
ctcaaacgagacgttaccgccagtattggtccttttaaaggaaggacaactgcttctact
gcttcactggcttgcaatttgttgttagccggtctagaagattcaacggaatggccagag
tctttcttgaaagtttttgtcgaagattccgttggagaaagagtttgggtagatcgcgaa
gaatgtcaagggtttgtcgagaatatcctaactgcattcaacaccaaagtcccttcaagg
aacatccttcaacaagaaagtgctactggcactgtacttggatcttctggtgctgctagt
tctcctagtataacttctcttggcaccactggtcttgaagatgatgccagcgtggattca
gataacagtcagggtgggctgcttcgaggttcaactcatctcgatcagcaacaggttcga
gttattcatcgatttcaacatctcaaagacatggcagaagcacttgtcatggaaatagta
aatcaacattttagcagacggcagcaaccggcatctgacctcactacaaggaacttctta
aagtttttgacatcaacagctggtttgcccgctgtaagaactcaagctgcccagcgattg
gaaatgtggctttccaatcaaaaacttgtgagaccagccaccgacctcctcctctcgatc
tgcgtcaattgcagtaccgaagctcctacagacacagatgttctaaatgctcttctacgt
ttgagattaaagagtaaaccgctgcttcagacgtatttaacttgttttaaagaattggtc
gagcagcaggcagaccagcttccactcattgtgcggttgttaatattcaatgagctctcc
ccttctcgaggaccgaataacatggcagtactggctgttttggtccaaccgtggcctgat
cgtgctgccaccattttagcggacgtttttatggaacttctactcaatcgtgacgattac
cttcgggcactcagagcactattacgtgaagtggttcgcgctctccgccacgatttacct
ttaccgacattttgtgcagctctcctacacggttgtatgcaagagagacgcaaagttgca
atcagagaattcgaattcaaggatcggcttttgaattcattggcagacttgacgacttta
tgcattttccttgccataagtccaggtgtgcgtgaatcagcatctttggtcgcccgtgga
gatttgagagagatggaacttttccgacagtttcacgtccaagcatcggccgtccaaaga
gaatcgatcagctgtttaagaacgtccatcccgtccgtgtttgagcccaatcgggtcgat
tatattcactgtctccgtaaagttttgtttatggaaagtggagagcattattacaataaa
gacggttggccactcgagtcggatcgacccattatgataagattggcttctgaaattccc
gttatggaggattcattgatccaaatcctgctcattggtttgtcaaaagatcatccaatt
acggctcctgacgcattagaactggctgatcaattattaagacgatgtgcagcagttcat
aatctaggattccttatgctagaggctgataaccaagaaatttttgacatggttcttcgc
ctcactgcttatcattatcctgaaaatatcgtcttgccacaaggatacactcctccaaat
ctggcaattagcacactttactggaaggcttggttgatgctattgatgttgattgctcat
aatcctggcagtcttgggtctgaggcatggaattcgtttcctacactccgagcattgatg
gagatgtgtatcacaaatgatttcgctacttcttctggtaccacagaccagacagagttg
caggtggctgcaattgaaaagcaaaccatcttggaattcgaaacacatctagcagccgcc
tctacaaaaactgttattaccgagaacaattctttgctgcttagtcaattgacatcgctt
gatccacgaggatctacgcgacgacctcctccggctgttattgagcagcttcgaactttg
aacgcaacacttcgactgggtcacctactttgtcgaagtcgccaaccggactttttattg
gaaattctgcataggcaaggagctgcgcaatcgaagccatggctggctgatttggtcgag
tctaatgaaggtgcttggaacgttctgcctgttcaatgtctttgtgagtttttgcttcac
gaagcagctgatgatctgcctgttaatgatctaatggacgatagtaagcaacagcttggc
aaacgcaaggaacgtcgtcacaaacaccaacagttggtccagcatctaagacttttgttg
actgatcccaatcaactacccgaagcatgccgtgaagtcctagactatttgatgagacga
ttgagtgctcagaaagctctcgcccgtcaccaagccctcacggcattgagtgtggtcttg
gcagtaaaagacgatgatattaccatgagtgatggtgcatgcttcgaaggaacaggagac
gattcccagttctcttggcttgttcatcagttacctaccatcccacatttcgaagccgta
cgccctgccgtgattgctgctctacgggccgcctttctaattgaaacacaaccactagcc
gtagcggcgtacttgaggttcttatccacctgcgctttggaagagccaattcaagaccaa
gctgatctaagcttggatcttgcccaggtaattgtagagcgtagcagtttaattgctgct
ctcttaccttcaccatcaaacaaaacgctgcaagcggcaaaaacgctggaatgtttgttg
caactcttttggcattaccttctcaaagcacgagagccaaacaaaggatcctacacttgg
tcggagaatcaagaccaagttttgatacagtggcaatctggcgaagcagcttcccttcac
attatggttgttcacgccatagtgagtctgctgacttacggagcccctcagcttgagcaa
cagtcaacctgtttcggtcgactactagaaatttggtttcctgccagcggggtacaaccc
caggcctatttagtcgagacgacagaggaagctcatctttatcctgactggatcaaactt
cgcatgattcgaagctctgttgatcctatagtcgatactgccttaaaggatttggagccg
gctcagatgatcctatttattcaatccttcggctttcctgtattgtctatgtctaagctt
ctgcaaactctggatcgaatggtgcaagataatccttttgccttcgtcgaggttgacata
gacaaagtttacatacagcagttgctccagattcaatgggcgagaggagctcgaggtgga
ttgctttttgccgatatcatgcagttggtagataccgaaattggttcgaccgccgacagc
aaggcgttcaatctgaccctgcgtcctcacctggacatttcatctcatccttctaagatc
agttcagcatccacttcctcgattgtaactgtcgatcatgcctctgcagtcctgaggcag
ctttttgacataaaaactgtcattcggatcagtcagctggagaagaacaaggcctaccgg
agtttgagcaatgctttgactcgagaaattcgtgccaacactcagccgtccactgaagct
tgtgccattgcttttgataatctcttggcgtctgccagtgtgtcaaagaatgagtttgaa
cttttgctagcggctttagagcgccaacctgcattctcgtgtggtttactccgacttttg
acgtcagcagcatcttcaccagcggcttctcttggtactggaaatattgtggtgatagtg
atgaacatttgtcagaagatagctccggtcactcctgatggacatagttcactgaaaagt
atcgctcttcaatttgtcaagtcccgcggactcttgagatctgaatcgactccggccgat
atcaacacattgaacctgtcctccaagcggttggagcgtcacttgcagcaactggctgct
cgtgcactggaaacaaacgatactcgttcacttgtaaaaagtattgtgagcagtttgagc
caaagtgggtttaaggcgagcttcgttggccttttggtcgactggatggagttgctggat
cccgaaattattacagcccagcctgatttagagatgcggttgctgtttggtaaaacgcct
aacccaccatcttgtcgtccgtatgccctcgcaatgttggtgcatcaggccagttgggct
acgctgcgcaaatgtattcaaaaactactgggtgctcgcgatatcgacgcttttgaggct
aaggtcgttctagactttctagctgctttgatcaaagttcccaagctttggcagggtaga
gacaagcacgttcccaagcatcagcagccggaagagctgcttaacctaaatcatcagcag
ttgtttcgactggccgaatatattatgagcgagtttgtacatcagactcaggaaaaggat
cgtgcacttcacatccttcaagagcggagtcaattgctactctcatgttgtggaggttcc
accaaaatggaagtgttattggctcgagatgtggcagaccttgcgggcagtgcggtaaag
agcgagagacagaaagcagcccaacaattacttctacgactttacgttcgggctccacat
gtcataacgagactccccaagacgtcgtttgcccagtttgacgacagcaaaaccctactg
acggccgtgccttgctccatcgattcaatggccctgacgctaatttcttcccttacgtct
cctcagccgggaaaagaaggcgccagaaaaatggcagactacgagactgccctccgcaaa
atggctgccactcatccacttctgcttttaaggcaatttgcttgcctcgctgccgccctt
cgaggacgctctcacctggacgtgtttgtcttgcgttcacgcaactatatgaatgttttc
tcctctattcttggaatcgcccaacaactcagcgccaaccttttcacccctgatcatcgc
gaggccctcgaggacatgctcaaatcattttggtgtctttttggcaaccagcgaacggtg
aaagaatcaatcggcccactacttcagaaattcctgcagtttttattggattttgtggcg
acagctccgttcgccgcgtcacactgtctccaacagcatgtgcctttattgcacgatctc
caggtgacccatccagagatgacggctataaaggacctcttgtcggcgctatcgcgaccc
cgacccactgataacgaggaggaccgccagccgtccacggttccaacccgccccagcatc
cgaataggtcctattctggcaagattgcgccaatctgataattacgaagaagtggtgacg
gttctccaagacttggagaacgtttgcggtcgagttgtttgcgctccgctggaaggggcc
attgccgatcttcgccctctcatgtcgtcatctaaccaaacggtccgcaacatgacgtac
atgctcatcttgcgctatctaaaggacaatcctaatgcatcctctgatctgctgccggat
tatttggactgcctggataatcggaatgctgccgtcgtaacaacagctctggaaagattg
ccagatttcctcctcctatgccaagaaaatggcgatgttttactccagaaaacgttcaac
ttggcggtcgagagcggatacaatacattgaccaatctaagcgaggccgttatgctcctg
caacatcagatgggcacgtga
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integrated database retrieval system
