Daphnia pulicaria: 124331340
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Entry
124331340 CDS
T08670
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
dpz
Daphnia pulicaria
Pathway
dpz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124331340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124331340
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124331340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_2nd
NUP210_Ig
Ig_NUP210_1st
Ig_NUP210_13th
Ig_NUP210_7th
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_16th
Ig_NUP210_6th
Big_2
Ig_NUP210_4th
Ig_NUP210_5th
Ig_NUP210_14th
Ig_NUP210_8th
Motif
Other DBs
NCBI-GeneID:
124331340
NCBI-ProteinID:
XP_046644750
LinkDB
All DBs
Position
1:12253097..12261656
Genome browser
AA seq
1877 aa
AA seq
DB search
MIRTCFLLILFTALAATSKLNVPRVLLPISAKTPVNFTLEVSDGGCYTWSSSRPEAVKII
PIIDDDRCSRHAVVTSSGTSSHKTSAIVLAKEINTGELLRCDVILNHIHTIQIAMKTREL
FIEDAPEEFYARASDDQGNEFSSVDGLVFRWTFEGHSTDTEPGNEPVLRWVQFADSSYEV
KPSIAALETLGYQGHVILIEGLRTGSAKVSVRLEDEIFKNVPTVDVNIVVVANLVLDPPE
VYLLPGTVVPLRLSQIRQGKAEIISLPSSQYYLEADDPKVSATIENTGSVRALDRGSTHV
RLRDRNMKDPDVSHAPYVIVHVVHPHRLSLALLPERSWATILGRTHAIQVELFDEHGNLI
QSNDDVFVKVNVPQAFTVDKATTNGTYHYGKASKLGVHKVKASLRAIKLTDGTELELNPT
LKASADMEIFESITVTPPIQVLAWDPVTQPRHEIKYKAAGGVSTHHFASSNTSFAAVSQA
GVAKTIGQGWCNISANIPKYPHLRGDAALYVLPAFNMKILNHIVEVEEGNYLNVPVAMKT
RLPNEEEIAFDDCSDVSIGIDLSDRKNFEIGPLVKDAPKFKGCRSIPVRASGISVTKLAL
TFNGEKTIIKDSIVLSSYRKLRYLEPVNRETVLALGSSRVIVFEGGPLPWINKPSGHYRK
VHVTNETVASVGQLLAVADSRHIHKDVFQVEVLCRQIGDTEVVYQVGNIASSSNMFPVQA
STTIKVSCAHPGQIYLIPEVRLPDETRVPCTIDTVTQRVVSQSYLDLKLITVVKDENGRK
LDNYSSVELEWTLSQTELGKLNKEGLMVDNKQADGYSTFGRSYRLLRPSGKTGPLDVTVR
IVGYKQSVLRMLGLTVQPSLVRSPVHSSADEEEEFNERLTNTIDLILVDDVKIAPAGESL
FNHPKNKMILHLSDGSGSFHLDYEPKDIALVEYSTTNRTVQITPLMNGELKITVTDQCLW
TRQPAFTTIQVVGISRIELQVSDKIEQGSSVPMSVQLFDTLGHPLGANVLHFVKLQPHLG
SSIVRVKASEGLDHTLEGVAFGETTVAFSTAAVRSSVVNVQVFAPLKLSPRNVTLVLGAT
MQVVSSGGPQPDAVVEYSLENGQMATCTSNGIIDAIQLGRTKLFARAVGIDRQTGKARIY
SQDQVDIHVVRLSGIRIAAPLTRVRQDTEMPVYLMGLDDFEVPFAFGTCNPPLIVEWLLS
DHQSGQVASPFLHSGLNPLSSGSYFATRFKALQPGHTTLKVKVTSRPNSGQLVRTELTDE
ISIQVYESLQLVNPFSTAGDAIVMMPNTELNLRTNLDSSASIEYTVEGSNDFVTSDSKGN
IRSGPSVGHASLVTAAVNTYGVAQSLSTLVEVRSVSYLMLTASPLLNLAPTDRLSVVPRG
FHLELRLSYRDSLGRAFHGVRNQLVFRPSRFDLIRISFDPDNSTLTVHADKVGQTVLHLS
DELNPGLKDYLRFDVADVIQPQQVALVLGDVVCFSTLVRPLNGGVGKWSADTKMLNIDSD
TGVAIVIGVGTSEVTYSVSEKQSTSTEVTTAHISSLRFEETSEKSITDSRRAGQFFAISL
RENGGSLVGDNCSAEAVTRFVRQRTSLLTCTVSFATESEINVEDVFISKAEFDAKSGFYQ
CVVKAVGNPTAASSTLDTDVILKAQFSNSVAHMAMPFHPAVFIQTPEVHVSDLQPASHLI
ITGKSSVLRQLEFTSSDSSALSIYAPQHPSPNSVKIPVRFNPGYLSENSRTSLFITLRSP
LTGQHVEIAIKIKLFGDHVQCVPDATWTNVISSLSQFVQERAFSLLTLLGTCAAIYIGYR
FLVGWSPYRISSNPVAFLPPNGISENSGYVSPFIKRGPQLWSVNNESPLHSSGIYPGSPH
SSPNTSSPLLHRRQSPF
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgattcggacttgttttttattaatactttttactgctctggctgcaacatctaaactt
aatgtacctcgtgtcttattaccaatctctgccaaaacgccggtgaatttcacgttggaa
gtgtccgatgggggttgctacacgtggtcttcttctcgaccagaagcagtcaaaattatc
ccaattattgacgatgacagatgttctagacatgctgtcgttacgtcttcaggaacttct
tctcataagacatcggctattgttttggccaaagaaataaacacgggggaacttctacga
tgtgacgtcattctaaatcacatccatacgattcagattgctatgaaaacccgtgaacta
ttcattgaagatgcccccgaagaattttacgccagagcatcagacgatcaaggcaatgaa
ttttctagcgttgacggattggtgttccggtggacatttgaaggccattccacggatacc
gaaccgggcaatgaacctgtcttgcgttgggttcagtttgccgattcttcttacgaagtt
aaaccgtcgatagctgctctcgagacactcggctaccaaggccatgtcattctcattgaa
ggtttgcgaacgggatctgccaaagtgtctgttcggcttgaagacgaaattttcaaaaat
gttcctactgtcgatgtaaatattgtagtagttgcaaatttggtcctcgatcctccagaa
gtttatcttcttccgggaactgttgtgcctttgcgattgagccaaattcgtcaagggaag
gcggaaatcatttctttaccttcgtcacaatattatttagaggcagacgatcccaaagtt
agcgctacaattgaaaacaccggttctgttcgggctttggatcgtggatcgacacatgtc
cgtttgcgtgacagaaatatgaaggatcccgatgttagccatgctccatacgtgattgtc
catgtcgtacatcctcatcgtctttctttagccttgttgccagaacgaagctgggcaact
attcttggcagaacccatgccattcaagtggaattatttgatgaacacggaaatttaatc
caatcaaatgacgatgtttttgtgaaagtcaatgttccgcaagcatttacagttgacaaa
gccacaacaaatggcacttaccattatggtaaagcttcgaagctaggagtacacaaggtt
aaagcctctttacgcgccattaagcttactgatggcactgaacttgaattaaatccaaca
ttgaaagccagtgccgacatggagatctttgagagcatcacagtaactccacccatccaa
gtgttagcttgggatccagtaactcaacctcgtcacgaaattaaatacaaggctgctgga
ggcgtatcaacgcaccattttgcctcttcaaacacgtcatttgcagcagtttctcaagct
ggagttgccaaaactattggacaaggctggtgtaatatttcggccaatattcccaagtac
ccacacttacggggagatgctgcactctacgttcttcctgccttcaatatgaaaattttg
aatcacatcgtagaagttgaagaaggcaattatctaaatgtacctgtagccatgaagact
cgattgcccaacgaggaagaaatcgcatttgacgattgctctgatgtctcgattggaatt
gaccttagtgatcggaagaatttcgagattggtccattggttaaagatgcacccaagttt
aaaggttgtcggtcaattccagtccgcgctagtggcatttcagtcaccaaattagcactg
acgttcaatggcgaaaagaccatcattaaagatagtatagttttgtcgtcataccgtaaa
cttcgttatttggagcccgttaatcgagaaactgtcttggctttggggtcttcaagagtg
attgtatttgaaggtgggcctcttccatggataaataaaccttcgggccattatcgtaaa
gttcatgtcacgaatgaaacggtcgcgtctgttggccagttactagccgtagcagatagt
aggcatattcacaaagacgtcttccaagtcgaagtcttgtgtcgccaaatcggtgataca
gaagttgtataccaagttggaaatattgcatcctcttcaaatatgtttcctgttcaagcc
tcaaccacgataaaggtttcatgtgcgcatcctgggcaaatttatttgattcctgaagta
cggttaccagacgaaaccagagttccctgcacaattgacacggttacgcaaagagtagtc
agccaatcttaccttgatttaaaattaataacggttgtgaaagacgaaaatggacgcaaa
ttggacaattactctagcgtagagttggagtggactctctctcagacggaactagggaaa
ctaaacaaagaagggctgatggtcgacaacaaacaagcggatggatactccacttttgga
cgaagttatcgcctgttgaggccttcgggtaaaaccggcccacttgatgttacggtgagg
attgttggatacaagcagtctgtgttacgtatgctgggtttgaccgttcaaccttccctg
gttcgatctccggttcatagctcagcagacgaagaagaggaattcaacgaaagattgacc
aacacgattgatttgatacttgttgatgatgtcaaaatcgcacctgcaggagaatcgcta
tttaaccatcccaagaataagatgattctacacctgtctgatggatctggaagtttccac
ttagattacgaacctaaagatattgccctggtggaatacagcactacgaatcgaaccgtt
caaataactcctctaatgaacggcgaactgaaaattacggtaacagatcaatgtttgtgg
actcgtcaacctgcgtttacaacaatccaggttgttggcatttcacggatcgaattacaa
gtatccgacaaaatagagcagggcagtagtgttcctatgagtgttcaattgtttgatact
ctaggccatcccttaggtgccaatgtcctccactttgtaaagttgcagcctcaccttggt
tcctcgattgtgcgcgttaaagctagcgaaggattagatcacactttggaaggggtagca
ttcggtgaaactacagtcgctttcagcacggctgcggttcgcagctcggttgtgaatgtc
caagtattcgctccgttaaaactcagccctcgaaatgtcactttagtattaggagctaca
atgcaagtggtgagttccggtgggcctcaaccagatgccgttgtcgagtatagtcttgaa
aacggacagatggcaacgtgtacttcaaacggaatcattgatgctattcaacttggacgc
acaaaactgtttgcacgagcagtgggcattgatcgtcaaacaggaaaagcccggatctac
tcccaggaccaagtggatatccatgtagtacgtctatcaggaatccggatagcagctcct
ctgactcgagtacgacaagacactgaaatgcctgtatatctgatgggccttgacgacttt
gaagttccgtttgcctttggaacctgcaatccccctctcatcgttgaatggcttttgagt
gatcaccaatctggacaggtggcaagtcctttccttcatagtggcttgaacccgttgtca
agcggcagttattttgcgacgcgcttcaaggccttacaaccgggacacacaactctgaaa
gttaaagtcacgtcccgcccaaattctggccagttagttcgtaccgagctgacagatgaa
atttccattcaagtttacgagtcacttcagctagtcaacccgttttccactgctggtgac
gcgatcgtaatgatgccaaataccgaactcaatctgcggaccaatttggattcgtctgca
tctattgagtacacagtcgaaggatcgaatgattttgttacttcagatagcaaaggcaat
atacgttcgggtccttcagtgggtcatgcttcactcgttacggcggctgtgaacacctat
ggagtagcgcagtcattaagcactcttgtggaggttcgctctgtatcctacttaatgttg
acggcttctccacttttgaatttggcacccacagatcgtctttcggtcgtcccacgagga
tttcatttggagcttcgtttaagctaccgagattcgctaggccgagcttttcatggagtc
cgaaatcaactcgtgttccgtcctagccgttttgatttgattcgtatttcgtttgatccc
gacaattcgacactcactgtgcacgctgataaagttggtcaaactgttttacatttgtcc
gatgaactcaatcctggtctcaaggactaccttcgctttgatgtggctgacgtaattcaa
cctcagcaagttgccctcgtgttaggagatgtggtttgtttttctactcttgtgcggccg
ttgaatggaggtgttggcaagtggtcagcggatactaaaatgctcaatatcgattcggat
actggagtggcgatagtgattggagtgggaacatccgaagtgacttacagcgtttccgaa
aaacagagcacatcaaccgaagttactacagctcatatttcttcgctccgctttgaagaa
acatcggagaaatccattacagattcacggcgtgctggtcaatttttcgccattagtctg
cgtgagaacggtggcagcttagtaggagacaattgtagcgcagaggctgtgactcgattc
gtgcggcagcgaacctcacttcttacttgcaccgtttcattcgcaactgaaagtgaaatc
aacgtcgaagatgtttttatttcaaaagctgaatttgatgccaaatcgggattctatcag
tgtgtagtgaaagcggtaggaaatccaaccgccgcaagcagtaccctggacacggatgtg
attctcaaagctcagttttccaattctgtggctcacatggcaatgcctttccatccagcc
gtcttcattcaaacgccagaagtccatgtcagtgatcttcagccagcttcgcatttaatt
attacggggaaatcgagcgtgcttcggcaactagaattcaccagcagtgatagctctgct
ctgagcatctacgctcctcaacatccctcgccgaacagtgtcaagatacccgttcgtttt
aaccctggctatctcagtgaaaacagcagaacatcgttattcataacgcttcgaagtcca
ctgacaggacaacatgtagagatcgcgattaagataaagttatttggtgaccatgttcag
tgcgttcctgatgcaacttggactaacgtgatttcttcattgtcgcaatttgtccaagag
agagcttttagtctcttaactctacttggcacatgtgcggccatttatatcggatatcgc
ttcttagtcggatggtccccttaccgaataagctcaaatcctgtcgcatttcttccgcct
aatgggatctcagaaaactcgggatacgtttcgccttttattaaacgtggacctcagctc
tggagtgtgaataatgagtctccacttcatagttcagggatttatccgggatcaccacac
tcatcacccaacacctcatcccctttactgcacagacgccaatcaccattctaa
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