Daphnia pulicaria: 124336889
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Entry
124336889 CDS
T08670
Name
(RefSeq) uncharacterized protein LOC124336889 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124336889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124336889
Enzymes [BR:
dpz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
124336889
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124336889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
124336889
NCBI-ProteinID:
XP_046646747
LinkDB
All DBs
Position
4:complement(11128391..11137236)
Genome browser
AA seq
1021 aa
AA seq
DB search
MAAQEALHGLHNTPYVKNEPMGNNGYDYNYAINDGTYANHHYNPYMHYGEPQHTYDHLAS
HHHHHYGPPHQNGPGSENHHHPVHYPQAQPQIPNPHMNQHHHPHHYGHGMDGGMSLNPPS
HYSMMPSNTGGPVYKDENTEDPYSFVDEETGANRSAVAPAAVESIKTEPTTGPAPKKRGR
KKKILPEPVPSPFSFAHRDVEPLPLPPMTMDSILPVGADAADGQPGKRKYTKSEHYKQRR
RHDRFNGMTEEEVRSRTLPDHLASNLDVVIIGINPGLFAAYKGHHYAGPGNHFWKCLYLA
GLVPEPMTADDDFKLMHFGIGFTNMVARATKGSADLTRKEIREGGRILLEKLQQYRPKIA
VFNGKGIYEVFSGKKEFTFGKQPECIDGTNTFIWVMPSSSARCAQLPRAMDKVPFYSALK
KFRDYLNGLIPEIDENEVIFNDPKIRAADDGTEISEHLKVDSLSSDDLPALVGASEFSVD
SEQQQQQQQQQPMNLPALLPIEDGMGGQVPVKKKRGRPKKIRADGTTAPTPVKQSSVSAA
TSSSSTAMNGADFVNGQPPKKKRGRPKKIRTDEVRPVPQMMDANGGLSNSFGGGGGSSSS
NHSHLENNRGPHSPAPSSYSSMAGHSFVNNQPSVINHPSSSSSASSQQQHSHALDYYGRA
SSNVGGGPLSGLCNDMSPHQSTSSTPQPATSSPRQLEFDPGDRMREGHPKTEHRATPAEL
NGDSRHHQMTSPGVNSSSSKAAEQQQQHHPPPPRSHPGTPQPMAYRPTPPAVAYHVPNQV
KDVASKSLSGLESLVDQIPNMADGEQNQQQQHQQQQQQQHPNGLHGQQPVAVSTSFGHYS
TAPAQPSFSYPSTSFGHYAPHYTTPNGGSFPPNLYNPGGQESVFNRTGTVSYPMSFPTSQ
MNGRSPAMAAGFPYSSYGQAYPHPPHSGAPSGFSPYNPPGSGGVIGGFHPSTSYAYGTTY
APSYTTTQAAASYLNAAAANHQALDGSRGPSGAGGSAGGGAGGSAGPKDERNSDPAAFGG
Y
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccaggaggcccttcatggactccacaacactccttacgtgaagaatgaacca
atgggcaacaatgggtatgactacaactatgccatcaatgatggcacctacgccaatcat
cactacaatccatacatgcactatggagagcctcaacacacttacgatcatctagcttct
caccaccatcatcactatgggccacctcatcagaacggtcctggctcagagaaccaccac
catcctgttcactacccacaggcccagccacagatcccgaacccccacatgaatcaacac
caccatccacatcactatgggcacgggatggatggaggaatgagccttaaccctccatcc
cactacagcatgatgccatcgaacacaggtggcccagtgtacaaagatgagaacacagaa
gatccgtacagttttgttgatgaagaaacaggggcaaacagaagtgcagttgcacctgcc
gctgtcgagtcaatcaaaactgagcccaccacgggtccagcacctaaaaagcgtggacga
aagaagaaaatcctacccgaaccagtcccaagtcctttctcttttgcgcatagggacgtt
gagccactgccactgccgccaatgacaatggacagcattctcccggtcggagctgacgcc
gccgacggccagccaggcaaacggaagtacaccaaatctgagcattacaaacagaggcga
agacatgaccgattcaacggcatgactgaggaggaagttcggtctagaacactcccagat
catctggcctcaaacttggacgtcgttatcattggaattaatccgggccttttcgctgca
tacaaaggacatcattacgcagggccgggcaaccatttctggaagtgcctgtatctagcc
ggccttgttccggaaccgatgacggccgatgatgactttaaactgatgcattttggcatc
ggattcaccaatatggtagccagagctacaaagggtagcgccgatctgactcgcaaagaa
atccgagaaggcggccggatattactggaaaagttacagcagtaccggccaaagattgcc
gtctttaacggcaaaggtatctacgaagtctttagcggcaagaaggagttcaccttcggc
aagcagcccgaatgtattgacggaacgaatacattcatttgggtgatgccgtcttcgagt
gcccgatgcgctcaactgcccagagccatggacaaggtgccgttttactctgcgctgaaa
aagttccgcgactacctcaacggcctcattcccgaaatcgatgagaatgaggtgatcttc
aacgatccaaagatccgggccgctgacgacggcacggaaattagtgaacatttaaaagtt
gattccctatcgtctgatgacttgccggccctagtaggagccagcgagttctcggtagac
tctgagcaacaacaacagcagcaacaacaacagccaatgaatctccctgccttgcttcca
attgaggacggaatgggtggccaggtcccggtaaaaaagaaacgtgggcggcccaagaaa
attcgagcggacggaacaacagctcctaccccggtgaagcagtcgagtgtttcggctgcg
acgtccagctcgtctactgccatgaacggtgccgactttgtcaacggccagccgccaaag
aagaagcgagggcgcccgaaaaagatccgaacggacgaggtccgccccgttccgcagatg
atggatgccaacggaggtctgagcaattcatttggcggaggcggcggcagcagcagctcc
aatcactctcacctggagaataatcgcgggccccactcacctgccccgtccagctactcc
agcatggccggccactcttttgtcaataatcaacccagtgtaatcaaccacccgtcatca
tcatcctccgcctccagtcagcaacaacattctcacgctctcgactattacggacgggcg
tccagcaatgtcggaggagggccgctatcgggactttgtaacgacatgtctccccatcaa
tccacatcatcaacacctcaaccggccacgtcatcgcctcgtcaattggaattcgatcca
ggcgacaggatgagggaaggccatccgaaaacggaacacagggccacaccggccgaattg
aacggcgattccaggcatcaccaaatgacttctcccggtgtcaacagcagcagcagcaaa
gcggccgagcagcagcagcagcaccacccacctcctcccaggagtcatccgggcactccg
cagcccatggcttacaggcctacgccaccggcagtcgcttatcacgtccccaatcaagta
aaggatgttgcaagtaagagcttatcaggtctggaatcgttggtggaccaaattccaaac
atggccgatggagagcagaatcaacaacaacagcatcaacagcagcagcaacagcaacac
ccaaacggcttacatggtcagcaacccgtggccgtgtcgacgagtttcggtcactacagt
acagcccctgcccagcctagtttctcttatccttcaacgtcattcggtcactacgcgcct
cactacactacccccaatggaggatcctttccacccaacctctacaatccaggtggccaa
gaatcagttttcaataggacggggacagtgtcgtatccgatgtcgttcccaacgtctcaa
atgaacggtcggagtcctgccatggctgctggctttccatactctagttacggccaggcg
taccctcatccgccgcatagcggggcgccatctggtttctctccttacaatccgccagga
tccggaggagtcatcggcggtttccacccgagcacttcgtacgcctacggcaccacgtac
gccccttcgtacacgaccactcaagcggctgccagctacctcaacgcagctgccgccaat
caccaagccctcgatggaagccgaggtccaagtggagcaggaggtagtgcaggaggtggt
gcaggaggatcagcagggccgaaagatgagcgaaattcagatccggctgctttcggtggg
tactga
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